RNA–Protein interactions for RNA: ENST00000455251.1

CLCP1-201, Transcript of Charcot-Leyden crystal protein pseudogene 1, humanhuman

BASIC

Gene CLCP1, Length 388 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCP1-201ENST00000455251 RIMS2Q9UQ26 1411 aa16.35■□□□□ 0.21
CLCP1-201ENST00000455251 ZNF335Q9H4Z2 1342 aaPredicted RBP16.34■□□□□ 0.21
CLCP1-201ENST00000455251 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
CLCP1-201ENST00000455251 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
CLCP1-201ENST00000455251 XIRP1Q702N8 1843 aaKnown RBP16.32■□□□□ 0.2
CLCP1-201ENST00000455251 NEXMIFQ5QGS0 1516 aa16.31■□□□□ 0.2
CLCP1-201ENST00000455251 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
CLCP1-201ENST00000455251 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
CLCP1-201ENST00000455251 HDGFP51858 240 aaKnown RBP16.3■□□□□ 0.2
CLCP1-201ENST00000455251 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
CLCP1-201ENST00000455251 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
CLCP1-201ENST00000455251 CPS1P31327 1500 aa16.29■□□□□ 0.2
CLCP1-201ENST00000455251 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
CLCP1-201ENST00000455251 BCANQ96GW7 911 aa16.29■□□□□ 0.2
CLCP1-201ENST00000455251 NRXN3Q9Y4C0 1643 aa16.29■□□□□ 0.2
CLCP1-201ENST00000455251 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
CLCP1-201ENST00000455251 PLEKHG1Q9ULL1 1385 aa16.27■□□□□ 0.2
CLCP1-201ENST00000455251 HRCP23327 699 aa16.27■□□□□ 0.2
CLCP1-201ENST00000455251 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLCP1-201ENST00000455251 DIP2AQ14689 1571 aa16.26■□□□□ 0.19
CLCP1-201ENST00000455251 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
CLCP1-201ENST00000455251 IQSEC2Q5JU85 1478 aa16.25■□□□□ 0.19
CLCP1-201ENST00000455251 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
CLCP1-201ENST00000455251 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
CLCP1-201ENST00000455251 SETBP1Q9Y6X0 1596 aa16.24■□□□□ 0.19
CLCP1-201ENST00000455251 TRIM26Q12899 539 aaPredicted RBP16.23■□□□□ 0.19
CLCP1-201ENST00000455251 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
CLCP1-201ENST00000455251 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
CLCP1-201ENST00000455251 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
CLCP1-201ENST00000455251 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
CLCP1-201ENST00000455251 ILDR1Q86SU0 546 aaPredicted RBP16.2■□□□□ 0.18
CLCP1-201ENST00000455251 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
CLCP1-201ENST00000455251 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
CLCP1-201ENST00000455251 XRN1Q8IZH2 1706 aaKnown RBP16.18■□□□□ 0.18
CLCP1-201ENST00000455251 RPGRIP1LQ68CZ1 1315 aa16.18■□□□□ 0.18
CLCP1-201ENST00000455251 TBX22Q9Y458 520 aa16.17■□□□□ 0.18
CLCP1-201ENST00000455251 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
CLCP1-201ENST00000455251 KCNA6P17658 529 aa16.16■□□□□ 0.18
CLCP1-201ENST00000455251 ALKQ9UM73 1620 aa16.16■□□□□ 0.18
CLCP1-201ENST00000455251 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
CLCP1-201ENST00000455251 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
CLCP1-201ENST00000455251 LAMC1P11047 1609 aa16.13■□□□□ 0.17
CLCP1-201ENST00000455251 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
CLCP1-201ENST00000455251 UBAP1LF5GYI3 381 aa16.11■□□□□ 0.17
CLCP1-201ENST00000455251 PROSER2Q86WR7 435 aaPredicted RBP16.11■□□□□ 0.17
CLCP1-201ENST00000455251 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
CLCP1-201ENST00000455251 RBM33Q96EV2 1170 aaKnown RBP16.1■□□□□ 0.17
CLCP1-201ENST00000455251 ADGRF5Q8IZF2 1346 aa16.1■□□□□ 0.17
CLCP1-201ENST00000455251 METP08581 1390 aa16.1■□□□□ 0.17
CLCP1-201ENST00000455251 TMEM94Q12767 1356 aa16.1■□□□□ 0.17
CLCP1-201ENST00000455251 MYOM2P54296 1465 aa16.1■□□□□ 0.17
CLCP1-201ENST00000455251 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
CLCP1-201ENST00000455251 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
CLCP1-201ENST00000455251 AMOTL2Q9Y2J4 779 aa16.08■□□□□ 0.16
CLCP1-201ENST00000455251 PIK3C2GO75747 1445 aa16.07■□□□□ 0.16
CLCP1-201ENST00000455251 NRXN1Q9ULB1 1477 aa16.06■□□□□ 0.16
CLCP1-201ENST00000455251 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
CLCP1-201ENST00000455251 TOM1O60784 492 aa16.06■□□□□ 0.16
CLCP1-201ENST00000455251 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
CLCP1-201ENST00000455251 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
CLCP1-201ENST00000455251 MSH6P52701 1360 aa16.03■□□□□ 0.16
CLCP1-201ENST00000455251 ROBO1Q9Y6N7 1651 aa16.03■□□□□ 0.16
CLCP1-201ENST00000455251 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
CLCP1-201ENST00000455251 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
CLCP1-201ENST00000455251 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
CLCP1-201ENST00000455251 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.16
CLCP1-201ENST00000455251 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
CLCP1-201ENST00000455251 NCOA3Q9Y6Q9 1424 aa16.01■□□□□ 0.15
CLCP1-201ENST00000455251 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
CLCP1-201ENST00000455251 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
CLCP1-201ENST00000455251 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
CLCP1-201ENST00000455251 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
CLCP1-201ENST00000455251 PRAG1Q86YV5 1406 aa15.98■□□□□ 0.15
CLCP1-201ENST00000455251 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
CLCP1-201ENST00000455251 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
CLCP1-201ENST00000455251 C14orf93Q9H972 538 aaKnown RBP15.97■□□□□ 0.15
CLCP1-201ENST00000455251 STK26Q9P289 416 aa15.97■□□□□ 0.15
CLCP1-201ENST00000455251 RGPD8O14715 1765 aaPredicted RBP15.97■□□□□ 0.15
CLCP1-201ENST00000455251 ROBO2Q9HCK4 1378 aa15.97■□□□□ 0.15
CLCP1-201ENST00000455251 PHLPP1O60346 1717 aa15.97■□□□□ 0.15
CLCP1-201ENST00000455251 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
CLCP1-201ENST00000455251 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
CLCP1-201ENST00000455251 ADGRB1O14514 1584 aa15.96■□□□□ 0.14
CLCP1-201ENST00000455251 ADGRL3Q9HAR2 1447 aa15.95■□□□□ 0.14
CLCP1-201ENST00000455251 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
CLCP1-201ENST00000455251 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
CLCP1-201ENST00000455251 TECPR2O15040 1411 aa15.94■□□□□ 0.14
CLCP1-201ENST00000455251 TRPM1Q7Z4N2 1603 aa15.94■□□□□ 0.14
CLCP1-201ENST00000455251 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
CLCP1-201ENST00000455251 ATF3P18847 181 aa15.93■□□□□ 0.14
CLCP1-201ENST00000455251 DCCP43146 1447 aa15.93■□□□□ 0.14
CLCP1-201ENST00000455251 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
CLCP1-201ENST00000455251 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
CLCP1-201ENST00000455251 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
CLCP1-201ENST00000455251 ABCC11Q96J66 1382 aa15.91■□□□□ 0.14
CLCP1-201ENST00000455251 SLAIN2Q9P270 581 aa15.91■□□□□ 0.14
CLCP1-201ENST00000455251 DLC1Q96QB1 1528 aa15.9■□□□□ 0.14
CLCP1-201ENST00000455251 HSPA1LP34931 641 aa15.9■□□□□ 0.14
CLCP1-201ENST00000455251 L3MBTL2Q969R5 705 aa15.9■□□□□ 0.14
CLCP1-201ENST00000455251 FAM135BQ49AJ0 1406 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms