RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PLEKHG1Q9ULL1 1385 aa21.1■□□□□ 0.97
HDAC4-205ENST00000454542 ZNF335Q9H4Z2 1342 aaPredicted RBP21.1■□□□□ 0.97
HDAC4-205ENST00000454542 CPS1P31327 1500 aa21.1■□□□□ 0.97
HDAC4-205ENST00000454542 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
HDAC4-205ENST00000454542 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
HDAC4-205ENST00000454542 NWD1Q149M9 1564 aa21.09■□□□□ 0.97
HDAC4-205ENST00000454542 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
HDAC4-205ENST00000454542 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
HDAC4-205ENST00000454542 CCDC144AA2RUR9 1427 aa21.06■□□□□ 0.96
HDAC4-205ENST00000454542 FOXD1Q16676 465 aa21.06■□□□□ 0.96
HDAC4-205ENST00000454542 IFT172Q9UG01 1749 aa21.06■□□□□ 0.96
HDAC4-205ENST00000454542 PPLO60437 1756 aa21.05■□□□□ 0.96
HDAC4-205ENST00000454542 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
HDAC4-205ENST00000454542 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
HDAC4-205ENST00000454542 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
HDAC4-205ENST00000454542 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
HDAC4-205ENST00000454542 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
HDAC4-205ENST00000454542 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
HDAC4-205ENST00000454542 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
HDAC4-205ENST00000454542 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
HDAC4-205ENST00000454542 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
HDAC4-205ENST00000454542 CHD2O14647 1828 aaKnown RBP20.99■□□□□ 0.95
HDAC4-205ENST00000454542 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
HDAC4-205ENST00000454542 XIRP1Q702N8 1843 aaKnown RBP20.97■□□□□ 0.95
HDAC4-205ENST00000454542 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-205ENST00000454542 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
HDAC4-205ENST00000454542 PIK3R4Q99570 1358 aa20.95■□□□□ 0.94
HDAC4-205ENST00000454542 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
HDAC4-205ENST00000454542 FBXO41Q8TF61 875 aa20.94■□□□□ 0.94
HDAC4-205ENST00000454542 TRIM26Q12899 539 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-205ENST00000454542 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
HDAC4-205ENST00000454542 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-205ENST00000454542 SLC26A8Q96RN1 970 aa20.92■□□□□ 0.94
HDAC4-205ENST00000454542 TBX22Q9Y458 520 aa20.92■□□□□ 0.94
HDAC4-205ENST00000454542 MYOM2P54296 1465 aa20.91■□□□□ 0.94
HDAC4-205ENST00000454542 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
HDAC4-205ENST00000454542 NRXN1Q9ULB1 1477 aa20.9■□□□□ 0.94
HDAC4-205ENST00000454542 KCNA6P17658 529 aa20.89■□□□□ 0.93
HDAC4-205ENST00000454542 PRAG1Q86YV5 1406 aa20.88■□□□□ 0.93
HDAC4-205ENST00000454542 PTPRUQ92729 1446 aa20.88■□□□□ 0.93
HDAC4-205ENST00000454542 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
HDAC4-205ENST00000454542 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
HDAC4-205ENST00000454542 VGFO15240 615 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-205ENST00000454542 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
HDAC4-205ENST00000454542 LAMC1P11047 1609 aa20.84■□□□□ 0.93
HDAC4-205ENST00000454542 BCANQ96GW7 911 aa20.83■□□□□ 0.93
HDAC4-205ENST00000454542 METP08581 1390 aa20.83■□□□□ 0.92
HDAC4-205ENST00000454542 TMEM94Q12767 1356 aa20.82■□□□□ 0.92
HDAC4-205ENST00000454542 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
HDAC4-205ENST00000454542 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-205ENST00000454542 ADGRF5Q8IZF2 1346 aa20.8■□□□□ 0.92
HDAC4-205ENST00000454542 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
HDAC4-205ENST00000454542 NCOA3Q9Y6Q9 1424 aa20.8■□□□□ 0.92
HDAC4-205ENST00000454542 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
HDAC4-205ENST00000454542 RGL3Q3MIN7 710 aa20.79■□□□□ 0.92
HDAC4-205ENST00000454542 TECPR2O15040 1411 aa20.75■□□□□ 0.91
HDAC4-205ENST00000454542 AMOTL2Q9Y2J4 779 aa20.74■□□□□ 0.91
HDAC4-205ENST00000454542 NALCNQ8IZF0 1738 aa20.73■□□□□ 0.91
HDAC4-205ENST00000454542 UBAP1LF5GYI3 381 aa20.73■□□□□ 0.91
HDAC4-205ENST00000454542 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-205ENST00000454542 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
HDAC4-205ENST00000454542 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
HDAC4-205ENST00000454542 DCCP43146 1447 aa20.7■□□□□ 0.9
HDAC4-205ENST00000454542 TOM1O60784 492 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 LRPPRCP42704 1394 aaKnown RBP20.69■□□□□ 0.9
HDAC4-205ENST00000454542 MSH6P52701 1360 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 ADGRL3Q9HAR2 1447 aa20.69■□□□□ 0.9
HDAC4-205ENST00000454542 C14orf93Q9H972 538 aaKnown RBP20.67■□□□□ 0.9
HDAC4-205ENST00000454542 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
HDAC4-205ENST00000454542 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
HDAC4-205ENST00000454542 DLC1Q96QB1 1528 aa20.65■□□□□ 0.9
HDAC4-205ENST00000454542 ABCC11Q96J66 1382 aa20.65■□□□□ 0.9
HDAC4-205ENST00000454542 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
HDAC4-205ENST00000454542 DCAF11Q8TEB1 546 aa20.63■□□□□ 0.89
HDAC4-205ENST00000454542 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
HDAC4-205ENST00000454542 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
HDAC4-205ENST00000454542 CFAP70Q5T0N1 1121 aa20.61■□□□□ 0.89
HDAC4-205ENST00000454542 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
HDAC4-205ENST00000454542 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
HDAC4-205ENST00000454542 MST1RQ04912 1400 aa20.59■□□□□ 0.89
HDAC4-205ENST00000454542 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
HDAC4-205ENST00000454542 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
HDAC4-205ENST00000454542 TRPM1Q7Z4N2 1603 aa20.57■□□□□ 0.88
HDAC4-205ENST00000454542 ADGRB2O60241 1585 aa20.57■□□□□ 0.88
HDAC4-205ENST00000454542 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
HDAC4-205ENST00000454542 CADPS2Q86UW7 1296 aa20.56■□□□□ 0.88
HDAC4-205ENST00000454542 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
HDAC4-205ENST00000454542 SIRT1Q96EB6 747 aa20.55■□□□□ 0.88
HDAC4-205ENST00000454542 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
HDAC4-205ENST00000454542 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
HDAC4-205ENST00000454542 L3MBTL2Q969R5 705 aa20.54■□□□□ 0.88
HDAC4-205ENST00000454542 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
HDAC4-205ENST00000454542 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
HDAC4-205ENST00000454542 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
HDAC4-205ENST00000454542 NHSL1Q5SYE7 1610 aa20.53■□□□□ 0.88
HDAC4-205ENST00000454542 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
HDAC4-205ENST00000454542 ATF3P18847 181 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms