RNA–Protein interactions for RNA: ENST00000454453.5

NEK6-211, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-211ENST00000454453 APLP2Q06481 763 aa39.97■■■■□ 3.99
NEK6-211ENST00000454453 ZFYVE9O95405 1425 aa39.97■■■■□ 3.99
NEK6-211ENST00000454453 MYO5BQ9ULV0 1848 aa39.93■■■■□ 3.98
NEK6-211ENST00000454453 MSH6P52701 1360 aa39.91■■■■□ 3.98
NEK6-211ENST00000454453 RPRD2Q5VT52 1461 aaKnown RBP39.91■■■■□ 3.98
NEK6-211ENST00000454453 CHD2O14647 1828 aaKnown RBP39.9■■■■□ 3.98
NEK6-211ENST00000454453 PHLPP1O60346 1717 aa39.89■■■■□ 3.98
NEK6-211ENST00000454453 SLAIN2Q9P270 581 aa39.89■■■■□ 3.98
NEK6-211ENST00000454453 PLEKHG1Q9ULL1 1385 aa39.88■■■■□ 3.97
NEK6-211ENST00000454453 BCANQ96GW7 911 aa39.88■■■■□ 3.97
NEK6-211ENST00000454453 GCC2Q8IWJ2 1684 aa39.88■■■■□ 3.97
NEK6-211ENST00000454453 TMEM131LA2VDJ0 1609 aa39.86■■■■□ 3.97
NEK6-211ENST00000454453 ANKRD50Q9ULJ7 1429 aa39.85■■■■□ 3.97
NEK6-211ENST00000454453 RIMS2Q9UQ26 1411 aa39.85■■■■□ 3.97
NEK6-211ENST00000454453 JCADQ9P266 1359 aa39.8■■■■□ 3.96
NEK6-211ENST00000454453 COL16A1Q07092 1604 aaPredicted RBP39.8■■■■□ 3.96
NEK6-211ENST00000454453 SETD1AO15047 1707 aaKnown RBP39.79■■■■□ 3.96
NEK6-211ENST00000454453 FAM50AQ14320 339 aaKnown RBP39.76■■■■□ 3.96
NEK6-211ENST00000454453 PPP1R15AO75807 674 aaPredicted RBP39.74■■■■□ 3.95
NEK6-211ENST00000454453 TBX22Q9Y458 520 aa39.74■■■■□ 3.95
NEK6-211ENST00000454453 ADAMTS13Q76LX8 1427 aa39.73■■■■□ 3.95
NEK6-211ENST00000454453 UNC13BO14795 1591 aa39.72■■■■□ 3.95
NEK6-211ENST00000454453 LRP6O75581 1613 aa39.7■■■■□ 3.95
NEK6-211ENST00000454453 NCOA3Q9Y6Q9 1424 aa39.7■■■■□ 3.95
NEK6-211ENST00000454453 E9PCH4 1651 aa39.68■■■■□ 3.94
NEK6-211ENST00000454453 HDGFP51858 240 aaKnown RBP39.68■■■■□ 3.94
NEK6-211ENST00000454453 NUTM2DQ5VT03 806 aaPredicted RBP39.67■■■■□ 3.94
NEK6-211ENST00000454453 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.65■■■■□ 3.94
NEK6-211ENST00000454453 CHGAP10645 457 aaKnown RBP39.63■■■■□ 3.93
NEK6-211ENST00000454453 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.62■■■■□ 3.93
NEK6-211ENST00000454453 DIP2AQ14689 1571 aa39.62■■■■□ 3.93
NEK6-211ENST00000454453 AHDC1Q5TGY3 1603 aaPredicted RBP39.62■■■■□ 3.93
NEK6-211ENST00000454453 C14orf37Q86TY3 774 aa39.58■■■■□ 3.93
NEK6-211ENST00000454453 SPATA31A6Q5VVP1 1343 aa39.58■■■■□ 3.93
NEK6-211ENST00000454453 C19orf44Q9H6X5 657 aa39.57■■■■□ 3.93
NEK6-211ENST00000454453 PIK3R4Q99570 1358 aa39.57■■■■□ 3.92
NEK6-211ENST00000454453 PTPRUQ92729 1446 aa39.56■■■■□ 3.92
NEK6-211ENST00000454453 IQGAP3Q86VI3 1631 aa39.55■■■■□ 3.92
NEK6-211ENST00000454453 CADPS2Q86UW7 1296 aa39.55■■■■□ 3.92
NEK6-211ENST00000454453 SHPRHQ149N8 1683 aa39.54■■■■□ 3.92
NEK6-211ENST00000454453 TRPM2O94759 1503 aa39.5■■■■□ 3.91
NEK6-211ENST00000454453 ATF3P18847 181 aa39.49■■■■□ 3.91
NEK6-211ENST00000454453 AMOTL2Q9Y2J4 779 aa39.49■■■■□ 3.91
NEK6-211ENST00000454453 ROCK1Q13464 1354 aa39.47■■■■□ 3.91
NEK6-211ENST00000454453 BRINP3Q76B58 766 aa39.47■■■■□ 3.91
NEK6-211ENST00000454453 MEX3CQ5U5Q3 659 aaKnown RBP39.46■■■■□ 3.91
NEK6-211ENST00000454453 NRXN3Q9Y4C0 1643 aa39.45■■■■□ 3.91
NEK6-211ENST00000454453 ZNF772Q68DY9 489 aaPredicted RBP39.44■■■■□ 3.9
NEK6-211ENST00000454453 UPF1Q92900 1129 aaKnown RBP eCLIP39.42■■■■□ 3.9
NEK6-211ENST00000454453 XRN1Q8IZH2 1706 aaKnown RBP39.41■■■■□ 3.9
NEK6-211ENST00000454453 TRIM52Q96A61 297 aa39.41■■■■□ 3.9
NEK6-211ENST00000454453 NUP155O75694 1391 aa39.4■■■■□ 3.9
NEK6-211ENST00000454453 DCCP43146 1447 aa39.38■■■■□ 3.89
NEK6-211ENST00000454453 ASXL1Q8IXJ9 1541 aa39.36■■■■□ 3.89
NEK6-211ENST00000454453 SETBP1Q9Y6X0 1596 aa39.36■■■■□ 3.89
NEK6-211ENST00000454453 MST1RQ04912 1400 aa39.34■■■■□ 3.89
NEK6-211ENST00000454453 NUTM2BA6NNL0 878 aaPredicted RBP39.32■■■■□ 3.89
NEK6-211ENST00000454453 NUTM2EB1AL46 878 aaPredicted RBP39.32■■■■□ 3.89
NEK6-211ENST00000454453 NUTM2AQ8IVF1 878 aaPredicted RBP39.32■■■■□ 3.89
NEK6-211ENST00000454453 NHSL1Q5SYE7 1610 aa39.31■■■■□ 3.88
NEK6-211ENST00000454453 SETD5Q9C0A6 1442 aa39.31■■■■□ 3.88
NEK6-211ENST00000454453 METP08581 1390 aa39.3■■■■□ 3.88
NEK6-211ENST00000454453 RXRBP28702 533 aa39.28■■■■□ 3.88
NEK6-211ENST00000454453 SPHKAPQ2M3C7 1700 aa39.28■■■■□ 3.88
NEK6-211ENST00000454453 CDK12Q9NYV4 1490 aaPredicted RBP39.24■■■■□ 3.87
NEK6-211ENST00000454453 AFF2P51816 1311 aa39.24■■■■□ 3.87
NEK6-211ENST00000454453 ITGAEP38570 1179 aa39.23■■■■□ 3.87
NEK6-211ENST00000454453 DDX17Q92841 729 aaKnown RBP39.21■■■■□ 3.87
NEK6-211ENST00000454453 NALCNQ8IZF0 1738 aa39.18■■■■□ 3.86
NEK6-211ENST00000454453 ADGRL3Q9HAR2 1447 aa39.18■■■■□ 3.86
NEK6-211ENST00000454453 ZNF326Q5BKZ1 582 aaKnown RBP39.17■■■■□ 3.86
NEK6-211ENST00000454453 NEXMIFQ5QGS0 1516 aa39.16■■■■□ 3.86
NEK6-211ENST00000454453 CLTCL1P53675 1640 aa39.15■■■■□ 3.86
NEK6-211ENST00000454453 LRRC59Q96AG4 307 aaKnown RBP39.15■■■■□ 3.86
NEK6-211ENST00000454453 PNPLA6Q8IY17 1366 aa39.15■■■■□ 3.86
NEK6-211ENST00000454453 RGS12O14924 1447 aa39.1■■■■□ 3.85
NEK6-211ENST00000454453 C8orf37Q96NL8 207 aa39.09■■■■□ 3.85
NEK6-211ENST00000454453 QTRT2Q9H974 415 aaKnown RBP39.05■■■■□ 3.84
NEK6-211ENST00000454453 C1orf167Q5SNV9 1468 aa39.05■■■■□ 3.84
NEK6-211ENST00000454453 LAMC1P11047 1609 aa39.03■■■■□ 3.84
NEK6-211ENST00000454453 PPARGC1BQ86YN6 1023 aaKnown RBP39.01■■■■□ 3.84
NEK6-211ENST00000454453 RBM6P78332 1123 aaKnown RBP39■■■■□ 3.83
NEK6-211ENST00000454453 PTCH1Q13635 1447 aa38.96■■■■□ 3.83
NEK6-211ENST00000454453 KIF1BO60333 1816 aa38.96■■■■□ 3.83
NEK6-211ENST00000454453 ROBO2Q9HCK4 1378 aa38.95■■■■□ 3.83
NEK6-211ENST00000454453 ADAMTS2O95450 1211 aa38.94■■■■□ 3.82
NEK6-211ENST00000454453 ORAI2Q96SN7 254 aa38.94■■■■□ 3.82
NEK6-211ENST00000454453 SOS2Q07890 1332 aaPredicted RBP38.92■■■■□ 3.82
NEK6-211ENST00000454453 NGLY1Q96IV0 654 aa38.9■■■■□ 3.82
NEK6-211ENST00000454453 PRAG1Q86YV5 1406 aa38.88■■■■□ 3.81
NEK6-211ENST00000454453 NAIPQ13075 1403 aa38.87■■■■□ 3.81
NEK6-211ENST00000454453 SRCAPQ6ZRS2 3230 aa38.83■■■■□ 3.81
NEK6-211ENST00000454453 VGFO15240 615 aaPredicted RBP38.82■■■■□ 3.8
NEK6-211ENST00000454453 USP21Q9UK80 565 aa38.81■■■■□ 3.8
NEK6-211ENST00000454453 COL22A1Q8NFW1 1626 aaPredicted RBP38.81■■■■□ 3.8
NEK6-211ENST00000454453 FNBP4Q8N3X1 1017 aaPredicted RBP38.78■■■■□ 3.8
NEK6-211ENST00000454453 HFM1A2PYH4 1435 aa38.76■■■■□ 3.8
NEK6-211ENST00000454453 RRBP1Q9P2E9 1410 aaKnown RBP38.76■■■■□ 3.8
NEK6-211ENST00000454453 PPLO60437 1756 aa38.75■■■■□ 3.79
NEK6-211ENST00000454453 ATRNO75882 1429 aa38.74■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms