RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 RIMS2Q9UQ26 1411 aa23.02■■□□□ 1.28
RFC5-204ENST00000454402 CCDC144AA2RUR9 1427 aa23.01■■□□□ 1.27
RFC5-204ENST00000454402 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
RFC5-204ENST00000454402 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
RFC5-204ENST00000454402 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
RFC5-204ENST00000454402 IQGAP1P46940 1657 aa22.98■■□□□ 1.27
RFC5-204ENST00000454402 KIF1BO60333 1816 aa22.96■■□□□ 1.27
RFC5-204ENST00000454402 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
RFC5-204ENST00000454402 HDGFP51858 240 aaKnown RBP22.96■■□□□ 1.27
RFC5-204ENST00000454402 SLC26A8Q96RN1 970 aa22.96■■□□□ 1.27
RFC5-204ENST00000454402 MED14O60244 1454 aa22.96■■□□□ 1.27
RFC5-204ENST00000454402 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.93■■□□□ 1.26
RFC5-204ENST00000454402 ANKRD30BQ9BXX2 1392 aa22.9■■□□□ 1.26
RFC5-204ENST00000454402 PLEKHG1Q9ULL1 1385 aa22.88■■□□□ 1.25
RFC5-204ENST00000454402 NEXMIFQ5QGS0 1516 aa22.87■■□□□ 1.25
RFC5-204ENST00000454402 CERKQ8TCT0 537 aa22.84■■□□□ 1.25
RFC5-204ENST00000454402 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
RFC5-204ENST00000454402 LTBP4Q8N2S1 1624 aa22.83■■□□□ 1.24
RFC5-204ENST00000454402 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
RFC5-204ENST00000454402 DHX57Q6P158 1386 aaKnown RBP22.81■■□□□ 1.24
RFC5-204ENST00000454402 RPGRIP1LQ68CZ1 1315 aa22.81■■□□□ 1.24
RFC5-204ENST00000454402 NEUROD1Q13562 356 aa22.78■■□□□ 1.24
RFC5-204ENST00000454402 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
RFC5-204ENST00000454402 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
RFC5-204ENST00000454402 ADAMTS13Q76LX8 1427 aa22.78■■□□□ 1.24
RFC5-204ENST00000454402 ADGRF5Q8IZF2 1346 aa22.78■■□□□ 1.24
RFC5-204ENST00000454402 RBM33Q96EV2 1170 aaKnown RBP22.77■■□□□ 1.24
RFC5-204ENST00000454402 PPLO60437 1756 aa22.77■■□□□ 1.24
RFC5-204ENST00000454402 STRCP1A6NGW2 1772 aa22.76■■□□□ 1.23
RFC5-204ENST00000454402 TBX22Q9Y458 520 aa22.76■■□□□ 1.23
RFC5-204ENST00000454402 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
RFC5-204ENST00000454402 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
RFC5-204ENST00000454402 KCNA6P17658 529 aa22.73■■□□□ 1.23
RFC5-204ENST00000454402 CPS1P31327 1500 aa22.73■■□□□ 1.23
RFC5-204ENST00000454402 SETBP1Q9Y6X0 1596 aa22.73■■□□□ 1.23
RFC5-204ENST00000454402 IFT172Q9UG01 1749 aa22.71■■□□□ 1.23
RFC5-204ENST00000454402 DIP2AQ14689 1571 aa22.71■■□□□ 1.23
RFC5-204ENST00000454402 METP08581 1390 aa22.71■■□□□ 1.23
RFC5-204ENST00000454402 PROSER2Q86WR7 435 aaPredicted RBP22.71■■□□□ 1.23
RFC5-204ENST00000454402 AMOTL2Q9Y2J4 779 aa22.69■■□□□ 1.22
RFC5-204ENST00000454402 LRRC7Q96NW7 1537 aa22.68■■□□□ 1.22
RFC5-204ENST00000454402 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
RFC5-204ENST00000454402 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
RFC5-204ENST00000454402 UBAP1LF5GYI3 381 aa22.65■■□□□ 1.22
RFC5-204ENST00000454402 TMEM132EQ6IEE7 984 aa22.65■■□□□ 1.22
RFC5-204ENST00000454402 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
RFC5-204ENST00000454402 TMEM94Q12767 1356 aa22.64■■□□□ 1.22
RFC5-204ENST00000454402 NWD1Q149M9 1564 aa22.64■■□□□ 1.21
RFC5-204ENST00000454402 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
RFC5-204ENST00000454402 C14orf37Q86TY3 774 aa22.64■■□□□ 1.21
RFC5-204ENST00000454402 STK26Q9P289 416 aa22.64■■□□□ 1.21
RFC5-204ENST00000454402 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
RFC5-204ENST00000454402 PIK3C2GO75747 1445 aa22.63■■□□□ 1.21
RFC5-204ENST00000454402 ILDR1Q86SU0 546 aaPredicted RBP22.62■■□□□ 1.21
RFC5-204ENST00000454402 FBXO41Q8TF61 875 aa22.62■■□□□ 1.21
RFC5-204ENST00000454402 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
RFC5-204ENST00000454402 MYOM2P54296 1465 aa22.62■■□□□ 1.21
RFC5-204ENST00000454402 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
RFC5-204ENST00000454402 PIP4K2BP78356 416 aa22.6■■□□□ 1.21
RFC5-204ENST00000454402 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
RFC5-204ENST00000454402 SETD1AO15047 1707 aaKnown RBP22.59■■□□□ 1.21
RFC5-204ENST00000454402 IQSEC2Q5JU85 1478 aa22.58■■□□□ 1.21
RFC5-204ENST00000454402 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
RFC5-204ENST00000454402 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
RFC5-204ENST00000454402 C14orf93Q9H972 538 aaKnown RBP22.56■■□□□ 1.2
RFC5-204ENST00000454402 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
RFC5-204ENST00000454402 XRN1Q8IZH2 1706 aaKnown RBP22.55■■□□□ 1.2
RFC5-204ENST00000454402 TOM1O60784 492 aa22.54■■□□□ 1.2
RFC5-204ENST00000454402 ASXL1Q8IXJ9 1541 aa22.54■■□□□ 1.2
RFC5-204ENST00000454402 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
RFC5-204ENST00000454402 ROBO2Q9HCK4 1378 aa22.52■■□□□ 1.2
RFC5-204ENST00000454402 MSH6P52701 1360 aa22.52■■□□□ 1.2
RFC5-204ENST00000454402 STAC3Q96MF2 364 aa22.5■■□□□ 1.19
RFC5-204ENST00000454402 YTHDC2Q9H6S0 1430 aaKnown RBP22.5■■□□□ 1.19
RFC5-204ENST00000454402 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
RFC5-204ENST00000454402 LAMC1P11047 1609 aa22.49■■□□□ 1.19
RFC5-204ENST00000454402 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
RFC5-204ENST00000454402 TRAK1Q9UPV9 953 aa22.49■■□□□ 1.19
RFC5-204ENST00000454402 SAFB2Q14151 953 aaKnown RBP eCLIP22.48■■□□□ 1.19
RFC5-204ENST00000454402 PRAG1Q86YV5 1406 aa22.48■■□□□ 1.19
RFC5-204ENST00000454402 ATF3P18847 181 aa22.46■■□□□ 1.19
RFC5-204ENST00000454402 PTCH1Q13635 1447 aa22.45■■□□□ 1.19
RFC5-204ENST00000454402 NBPF1Q3BBV0 1214 aa22.45■■□□□ 1.18
RFC5-204ENST00000454402 C19orf44Q9H6X5 657 aa22.45■■□□□ 1.18
RFC5-204ENST00000454402 PLEKHH1Q9ULM0 1364 aa22.45■■□□□ 1.18
RFC5-204ENST00000454402 ABCC11Q96J66 1382 aa22.43■■□□□ 1.18
RFC5-204ENST00000454402 PRAM1Q96QH2 718 aa22.42■■□□□ 1.18
RFC5-204ENST00000454402 POGKQ9P215 609 aa22.42■■□□□ 1.18
RFC5-204ENST00000454402 ADGRB1O14514 1584 aa22.42■■□□□ 1.18
RFC5-204ENST00000454402 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.42■■□□□ 1.18
RFC5-204ENST00000454402 NCOA3Q9Y6Q9 1424 aa22.41■■□□□ 1.18
RFC5-204ENST00000454402 NALCNQ8IZF0 1738 aa22.4■■□□□ 1.18
RFC5-204ENST00000454402 NBPF8Q3BBV2 869 aa22.4■■□□□ 1.18
RFC5-204ENST00000454402 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
RFC5-204ENST00000454402 CADPS2Q86UW7 1296 aa22.39■■□□□ 1.18
RFC5-204ENST00000454402 SLAIN2Q9P270 581 aa22.39■■□□□ 1.18
RFC5-204ENST00000454402 TECPR2O15040 1411 aa22.39■■□□□ 1.17
RFC5-204ENST00000454402 KNDC1Q76NI1 1749 aa22.39■■□□□ 1.17
RFC5-204ENST00000454402 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
RFC5-204ENST00000454402 HIRIP3Q9BW71 556 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms