RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
HLA-DPA3-207ENST00000454398 UNC13BO14795 1591 aa9.41□□□□□ -0.9
HLA-DPA3-207ENST00000454398 FAM135BQ49AJ0 1406 aa9.41□□□□□ -0.9
HLA-DPA3-207ENST00000454398 FAM50AQ14320 339 aaKnown RBP9.41□□□□□ -0.9
HLA-DPA3-207ENST00000454398 E9PCH4 1651 aa9.41□□□□□ -0.9
HLA-DPA3-207ENST00000454398 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
HLA-DPA3-207ENST00000454398 COL16A1Q07092 1604 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPA3-207ENST00000454398 ANKRD50Q9ULJ7 1429 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 LRP6O75581 1613 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 KCNA6P17658 529 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 NUTM2DQ5VT03 806 aaPredicted RBP9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 BCANQ96GW7 911 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 RIMS2Q9UQ26 1411 aa9.39□□□□□ -0.91
HLA-DPA3-207ENST00000454398 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
HLA-DPA3-207ENST00000454398 APLP2Q06481 763 aa9.38□□□□□ -0.91
HLA-DPA3-207ENST00000454398 PROSER2Q86WR7 435 aaPredicted RBP9.38□□□□□ -0.91
HLA-DPA3-207ENST00000454398 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
HLA-DPA3-207ENST00000454398 PTPRUQ92729 1446 aa9.37□□□□□ -0.91
HLA-DPA3-207ENST00000454398 MSH6P52701 1360 aa9.37□□□□□ -0.91
HLA-DPA3-207ENST00000454398 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA3-207ENST00000454398 IQGAP3Q86VI3 1631 aa9.36□□□□□ -0.91
HLA-DPA3-207ENST00000454398 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
HLA-DPA3-207ENST00000454398 NRXN3Q9Y4C0 1643 aa9.35□□□□□ -0.91
HLA-DPA3-207ENST00000454398 CHGAP10645 457 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA3-207ENST00000454398 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.35□□□□□ -0.91
HLA-DPA3-207ENST00000454398 DIP2AQ14689 1571 aa9.33□□□□□ -0.92
HLA-DPA3-207ENST00000454398 C14orf37Q86TY3 774 aa9.33□□□□□ -0.92
HLA-DPA3-207ENST00000454398 XRN1Q8IZH2 1706 aaKnown RBP9.33□□□□□ -0.92
HLA-DPA3-207ENST00000454398 AHDC1Q5TGY3 1603 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SPHKAPQ2M3C7 1700 aa9.32□□□□□ -0.92
HLA-DPA3-207ENST00000454398 ITGAEP38570 1179 aa9.32□□□□□ -0.92
HLA-DPA3-207ENST00000454398 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
HLA-DPA3-207ENST00000454398 TRPM2O94759 1503 aa9.31□□□□□ -0.92
HLA-DPA3-207ENST00000454398 JCADQ9P266 1359 aa9.31□□□□□ -0.92
HLA-DPA3-207ENST00000454398 NALCNQ8IZF0 1738 aa9.31□□□□□ -0.92
HLA-DPA3-207ENST00000454398 CLTCL1P53675 1640 aa9.31□□□□□ -0.92
HLA-DPA3-207ENST00000454398 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SLC52A1Q9NWF4 448 aa9.3□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
HLA-DPA3-207ENST00000454398 NUP155O75694 1391 aa9.28□□□□□ -0.92
HLA-DPA3-207ENST00000454398 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA3-207ENST00000454398 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA3-207ENST00000454398 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
HLA-DPA3-207ENST00000454398 TBX22Q9Y458 520 aa9.28□□□□□ -0.92
HLA-DPA3-207ENST00000454398 SRCAPQ6ZRS2 3230 aa9.27□□□□□ -0.92
HLA-DPA3-207ENST00000454398 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
HLA-DPA3-207ENST00000454398 METP08581 1390 aa9.27□□□□□ -0.93
HLA-DPA3-207ENST00000454398 NEXMIFQ5QGS0 1516 aa9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 ROCK1Q13464 1354 aa9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 MST1RQ04912 1400 aa9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 NUTM2AQ8IVF1 878 aaPredicted RBP9.26□□□□□ -0.93
HLA-DPA3-207ENST00000454398 ATF3P18847 181 aa9.24□□□□□ -0.93
HLA-DPA3-207ENST00000454398 AMOTL2Q9Y2J4 779 aa9.24□□□□□ -0.93
HLA-DPA3-207ENST00000454398 RGS12O14924 1447 aa9.23□□□□□ -0.93
HLA-DPA3-207ENST00000454398 ADGRL3Q9HAR2 1447 aa9.23□□□□□ -0.93
HLA-DPA3-207ENST00000454398 NCOA3Q9Y6Q9 1424 aa9.23□□□□□ -0.93
HLA-DPA3-207ENST00000454398 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.23□□□□□ -0.93
HLA-DPA3-207ENST00000454398 UPF1Q92900 1129 aaKnown RBP eCLIP9.23□□□□□ -0.93
HLA-DPA3-207ENST00000454398 DCCP43146 1447 aa9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 ZNF326Q5BKZ1 582 aaKnown RBP9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 C19orf44Q9H6X5 657 aa9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 SPATA31A6Q5VVP1 1343 aa9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
HLA-DPA3-207ENST00000454398 AFF2P51816 1311 aa9.21□□□□□ -0.94
HLA-DPA3-207ENST00000454398 EP400Q96L91 3159 aa9.21□□□□□ -0.94
HLA-DPA3-207ENST00000454398 KIF1BO60333 1816 aa9.21□□□□□ -0.94
HLA-DPA3-207ENST00000454398 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
HLA-DPA3-207ENST00000454398 SETD5Q9C0A6 1442 aa9.21□□□□□ -0.94
HLA-DPA3-207ENST00000454398 C8orf37Q96NL8 207 aa9.2□□□□□ -0.94
HLA-DPA3-207ENST00000454398 ROBO2Q9HCK4 1378 aa9.2□□□□□ -0.94
HLA-DPA3-207ENST00000454398 PPLO60437 1756 aa9.19□□□□□ -0.94
HLA-DPA3-207ENST00000454398 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 NAIPQ13075 1403 aa9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 PTCH1Q13635 1447 aa9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 C1orf167Q5SNV9 1468 aa9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 ZNF772Q68DY9 489 aaPredicted RBP9.18□□□□□ -0.94
HLA-DPA3-207ENST00000454398 LAMC1P11047 1609 aa9.16□□□□□ -0.94
HLA-DPA3-207ENST00000454398 ORAI2Q96SN7 254 aa9.16□□□□□ -0.94
HLA-DPA3-207ENST00000454398 CDK12Q9NYV4 1490 aaPredicted RBP9.15□□□□□ -0.94
HLA-DPA3-207ENST00000454398 RRBP1Q9P2E9 1410 aaKnown RBP9.15□□□□□ -0.94
HLA-DPA3-207ENST00000454398 RXRBP28702 533 aa9.15□□□□□ -0.94
HLA-DPA3-207ENST00000454398 FOXD1Q16676 465 aa9.15□□□□□ -0.94
HLA-DPA3-207ENST00000454398 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.95
HLA-DPA3-207ENST00000454398 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
HLA-DPA3-207ENST00000454398 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
HLA-DPA3-207ENST00000454398 COL22A1Q8NFW1 1626 aaPredicted RBP9.13□□□□□ -0.95
HLA-DPA3-207ENST00000454398 IFT172Q9UG01 1749 aa9.13□□□□□ -0.95
HLA-DPA3-207ENST00000454398 PLEKHH1Q9ULM0 1364 aa9.12□□□□□ -0.95
HLA-DPA3-207ENST00000454398 SOS2Q07890 1332 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA3-207ENST00000454398 NUTM2FA1L443 756 aa9.12□□□□□ -0.95
HLA-DPA3-207ENST00000454398 MYOM2P54296 1465 aa9.12□□□□□ -0.95
HLA-DPA3-207ENST00000454398 PXDNQ92626 1479 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms