RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 ZFYVE9O95405 1425 aa16.25■□□□□ 0.19
LMCD1-205ENST00000454244 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
LMCD1-205ENST00000454244 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
LMCD1-205ENST00000454244 HFM1A2PYH4 1435 aa16.23■□□□□ 0.19
LMCD1-205ENST00000454244 KCNA6P17658 529 aa16.23■□□□□ 0.19
LMCD1-205ENST00000454244 NUTM2DQ5VT03 806 aaPredicted RBP16.23■□□□□ 0.19
LMCD1-205ENST00000454244 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
LMCD1-205ENST00000454244 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
LMCD1-205ENST00000454244 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMCD1-205ENST00000454244 HSPA1LP34931 641 aa16.2■□□□□ 0.18
LMCD1-205ENST00000454244 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
LMCD1-205ENST00000454244 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
LMCD1-205ENST00000454244 ALKQ9UM73 1620 aa16.18■□□□□ 0.18
LMCD1-205ENST00000454244 MYO5BQ9ULV0 1848 aa16.17■□□□□ 0.18
LMCD1-205ENST00000454244 DISP3Q9P2K9 1392 aa16.17■□□□□ 0.18
LMCD1-205ENST00000454244 RBM33Q96EV2 1170 aaKnown RBP16.17■□□□□ 0.18
LMCD1-205ENST00000454244 TBX22Q9Y458 520 aa16.17■□□□□ 0.18
LMCD1-205ENST00000454244 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
LMCD1-205ENST00000454244 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
LMCD1-205ENST00000454244 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
LMCD1-205ENST00000454244 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
LMCD1-205ENST00000454244 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
LMCD1-205ENST00000454244 NWD1Q149M9 1564 aa16.13■□□□□ 0.17
LMCD1-205ENST00000454244 TRPM2O94759 1503 aa16.12■□□□□ 0.17
LMCD1-205ENST00000454244 CLTCL1P53675 1640 aa16.11■□□□□ 0.17
LMCD1-205ENST00000454244 FOXD1Q16676 465 aa16.09■□□□□ 0.17
LMCD1-205ENST00000454244 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
LMCD1-205ENST00000454244 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.17
LMCD1-205ENST00000454244 MSH6P52701 1360 aa16.08■□□□□ 0.16
LMCD1-205ENST00000454244 DIP2AQ14689 1571 aa16.08■□□□□ 0.16
LMCD1-205ENST00000454244 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
LMCD1-205ENST00000454244 MPHOSPH9Q99550 1183 aa16.06■□□□□ 0.16
LMCD1-205ENST00000454244 FAM135BQ49AJ0 1406 aa16.05■□□□□ 0.16
LMCD1-205ENST00000454244 PTPRUQ92729 1446 aa16.05■□□□□ 0.16
LMCD1-205ENST00000454244 ILDR2Q71H61 639 aa16.05■□□□□ 0.16
LMCD1-205ENST00000454244 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
LMCD1-205ENST00000454244 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
LMCD1-205ENST00000454244 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
LMCD1-205ENST00000454244 SETD5Q9C0A6 1442 aa16.04■□□□□ 0.16
LMCD1-205ENST00000454244 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
LMCD1-205ENST00000454244 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
LMCD1-205ENST00000454244 METP08581 1390 aa16.02■□□□□ 0.16
LMCD1-205ENST00000454244 NRXN3Q9Y4C0 1643 aa16.02■□□□□ 0.16
LMCD1-205ENST00000454244 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
LMCD1-205ENST00000454244 VGFO15240 615 aaPredicted RBP16.02■□□□□ 0.16
LMCD1-205ENST00000454244 SLAIN2Q9P270 581 aa16.02■□□□□ 0.16
LMCD1-205ENST00000454244 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
LMCD1-205ENST00000454244 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
LMCD1-205ENST00000454244 KIF1BO60333 1816 aa16■□□□□ 0.15
LMCD1-205ENST00000454244 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
LMCD1-205ENST00000454244 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
LMCD1-205ENST00000454244 RAB3GAP2Q9H2M9 1393 aa15.99■□□□□ 0.15
LMCD1-205ENST00000454244 ATF3P18847 181 aa15.98■□□□□ 0.15
LMCD1-205ENST00000454244 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
LMCD1-205ENST00000454244 CADPS2Q86UW7 1296 aa15.98■□□□□ 0.15
LMCD1-205ENST00000454244 ROBO1Q9Y6N7 1651 aa15.96■□□□□ 0.15
LMCD1-205ENST00000454244 XRN1Q8IZH2 1706 aaKnown RBP15.96■□□□□ 0.15
LMCD1-205ENST00000454244 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
LMCD1-205ENST00000454244 PHF23Q9BUL5 403 aaPredicted RBP15.94■□□□□ 0.14
LMCD1-205ENST00000454244 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
LMCD1-205ENST00000454244 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.92■□□□□ 0.14
LMCD1-205ENST00000454244 ANKRD30BQ9BXX2 1392 aa15.91■□□□□ 0.14
LMCD1-205ENST00000454244 DCCP43146 1447 aa15.91■□□□□ 0.14
LMCD1-205ENST00000454244 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
LMCD1-205ENST00000454244 PPLO60437 1756 aa15.9■□□□□ 0.14
LMCD1-205ENST00000454244 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
LMCD1-205ENST00000454244 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
LMCD1-205ENST00000454244 SOCS7O14512 581 aa15.89■□□□□ 0.13
LMCD1-205ENST00000454244 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
LMCD1-205ENST00000454244 MST1RQ04912 1400 aa15.87■□□□□ 0.13
LMCD1-205ENST00000454244 HRCP23327 699 aa15.87■□□□□ 0.13
LMCD1-205ENST00000454244 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
LMCD1-205ENST00000454244 JCADQ9P266 1359 aa15.87■□□□□ 0.13
LMCD1-205ENST00000454244 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
LMCD1-205ENST00000454244 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
LMCD1-205ENST00000454244 STK26Q9P289 416 aa15.85■□□□□ 0.13
LMCD1-205ENST00000454244 TMEM132EQ6IEE7 984 aa15.84■□□□□ 0.13
LMCD1-205ENST00000454244 PIK3C2GO75747 1445 aa15.84■□□□□ 0.13
LMCD1-205ENST00000454244 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.13
LMCD1-205ENST00000454244 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.13
LMCD1-205ENST00000454244 RGS17Q9UGC6 210 aaPredicted RBP15.83■□□□□ 0.12
LMCD1-205ENST00000454244 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
LMCD1-205ENST00000454244 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.12
LMCD1-205ENST00000454244 C1orf167Q5SNV9 1468 aa15.81■□□□□ 0.12
LMCD1-205ENST00000454244 NALCNQ8IZF0 1738 aa15.81■□□□□ 0.12
LMCD1-205ENST00000454244 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
LMCD1-205ENST00000454244 IFT172Q9UG01 1749 aa15.81■□□□□ 0.12
LMCD1-205ENST00000454244 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
LMCD1-205ENST00000454244 CFAP70Q5T0N1 1121 aa15.8■□□□□ 0.12
LMCD1-205ENST00000454244 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
LMCD1-205ENST00000454244 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
LMCD1-205ENST00000454244 MYOM2P54296 1465 aa15.79■□□□□ 0.12
LMCD1-205ENST00000454244 TECPR2O15040 1411 aa15.79■□□□□ 0.12
LMCD1-205ENST00000454244 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
LMCD1-205ENST00000454244 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
LMCD1-205ENST00000454244 YTHDC2Q9H6S0 1430 aaKnown RBP15.78■□□□□ 0.12
LMCD1-205ENST00000454244 ORAI2Q96SN7 254 aa15.78■□□□□ 0.12
LMCD1-205ENST00000454244 PLEKHH1Q9ULM0 1364 aa15.77■□□□□ 0.12
LMCD1-205ENST00000454244 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.12
LMCD1-205ENST00000454244 POTEAQ6S8J7 498 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms