RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 CCDC144AA2RUR9 1427 aa29.34■■■□□ 2.29
PMPCB-205ENST00000453466 CLTCL1P53675 1640 aa29.33■■■□□ 2.29
PMPCB-205ENST00000453466 ZFYVE9O95405 1425 aa29.32■■■□□ 2.28
PMPCB-205ENST00000453466 BCANQ96GW7 911 aa29.31■■■□□ 2.28
PMPCB-205ENST00000453466 NUTM2DQ5VT03 806 aaPredicted RBP29.29■■■□□ 2.28
PMPCB-205ENST00000453466 ZNF335Q9H4Z2 1342 aaPredicted RBP29.27■■■□□ 2.28
PMPCB-205ENST00000453466 MYO5BQ9ULV0 1848 aa29.26■■■□□ 2.28
PMPCB-205ENST00000453466 IQGAP1P46940 1657 aa29.26■■■□□ 2.27
PMPCB-205ENST00000453466 CCER1Q8TC90 406 aaPredicted RBP29.25■■■□□ 2.27
PMPCB-205ENST00000453466 RPGRIP1LQ68CZ1 1315 aa29.24■■■□□ 2.27
PMPCB-205ENST00000453466 ANKRD30BQ9BXX2 1392 aa29.24■■■□□ 2.27
PMPCB-205ENST00000453466 PLEKHG1Q9ULL1 1385 aa29.24■■■□□ 2.27
PMPCB-205ENST00000453466 KIF1BO60333 1816 aa29.22■■■□□ 2.27
PMPCB-205ENST00000453466 CERKQ8TCT0 537 aa29.22■■■□□ 2.27
PMPCB-205ENST00000453466 SLC26A8Q96RN1 970 aa29.22■■■□□ 2.27
PMPCB-205ENST00000453466 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
PMPCB-205ENST00000453466 RGL3Q3MIN7 710 aa29.2■■■□□ 2.27
PMPCB-205ENST00000453466 VGFO15240 615 aaPredicted RBP29.2■■■□□ 2.26
PMPCB-205ENST00000453466 DHX57Q6P158 1386 aaKnown RBP29.17■■■□□ 2.26
PMPCB-205ENST00000453466 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
PMPCB-205ENST00000453466 TBX22Q9Y458 520 aa29.15■■■□□ 2.26
PMPCB-205ENST00000453466 LTBP4Q8N2S1 1624 aa29.15■■■□□ 2.26
PMPCB-205ENST00000453466 SPATA31E1Q6ZUB1 1445 aa29.15■■■□□ 2.26
PMPCB-205ENST00000453466 CLSPNQ9HAW4 1339 aa29.13■■■□□ 2.25
PMPCB-205ENST00000453466 NEXMIFQ5QGS0 1516 aa29.12■■■□□ 2.25
PMPCB-205ENST00000453466 KCNA6P17658 529 aa29.1■■■□□ 2.25
PMPCB-205ENST00000453466 CPS1P31327 1500 aa29.08■■■□□ 2.25
PMPCB-205ENST00000453466 ADAMTS13Q76LX8 1427 aa29.07■■■□□ 2.24
PMPCB-205ENST00000453466 PIK3R4Q99570 1358 aa29.02■■■□□ 2.24
PMPCB-205ENST00000453466 DIP2AQ14689 1571 aa29.02■■■□□ 2.24
PMPCB-205ENST00000453466 SETBP1Q9Y6X0 1596 aa29.02■■■□□ 2.24
PMPCB-205ENST00000453466 ADGRF5Q8IZF2 1346 aa29.01■■■□□ 2.23
PMPCB-205ENST00000453466 IQSEC2Q5JU85 1478 aa28.99■■■□□ 2.23
PMPCB-205ENST00000453466 FBXO41Q8TF61 875 aa28.99■■■□□ 2.23
PMPCB-205ENST00000453466 PPLO60437 1756 aa28.98■■■□□ 2.23
PMPCB-205ENST00000453466 PROSER2Q86WR7 435 aaPredicted RBP28.97■■■□□ 2.23
PMPCB-205ENST00000453466 STAC3Q96MF2 364 aa28.97■■■□□ 2.23
PMPCB-205ENST00000453466 DCAF11Q8TEB1 546 aa28.96■■■□□ 2.23
PMPCB-205ENST00000453466 AMOTL2Q9Y2J4 779 aa28.95■■■□□ 2.23
PMPCB-205ENST00000453466 LRRC7Q96NW7 1537 aa28.95■■■□□ 2.22
PMPCB-205ENST00000453466 NRXN3Q9Y4C0 1643 aa28.94■■■□□ 2.22
PMPCB-205ENST00000453466 STRCP1A6NGW2 1772 aa28.93■■■□□ 2.22
PMPCB-205ENST00000453466 METP08581 1390 aa28.93■■■□□ 2.22
PMPCB-205ENST00000453466 KDM2AQ9Y2K7 1162 aa28.93■■■□□ 2.22
PMPCB-205ENST00000453466 SIN3AQ96ST3 1273 aa28.92■■■□□ 2.22
PMPCB-205ENST00000453466 NKTRP30414 1462 aaKnown RBP28.9■■■□□ 2.22
PMPCB-205ENST00000453466 NEUROD1Q13562 356 aa28.89■■■□□ 2.22
PMPCB-205ENST00000453466 NWD1Q149M9 1564 aa28.89■■■□□ 2.22
PMPCB-205ENST00000453466 ALKQ9UM73 1620 aa28.89■■■□□ 2.22
PMPCB-205ENST00000453466 MYOM2P54296 1465 aa28.89■■■□□ 2.21
PMPCB-205ENST00000453466 TMEM94Q12767 1356 aa28.89■■■□□ 2.21
PMPCB-205ENST00000453466 CHD2O14647 1828 aaKnown RBP28.88■■■□□ 2.21
PMPCB-205ENST00000453466 IFT172Q9UG01 1749 aa28.88■■■□□ 2.21
PMPCB-205ENST00000453466 PTPRUQ92729 1446 aa28.88■■■□□ 2.21
PMPCB-205ENST00000453466 PIK3C2GO75747 1445 aa28.88■■■□□ 2.21
PMPCB-205ENST00000453466 UBAP1LF5GYI3 381 aa28.87■■■□□ 2.21
PMPCB-205ENST00000453466 ILDR1Q86SU0 546 aaPredicted RBP28.86■■■□□ 2.21
PMPCB-205ENST00000453466 C14orf93Q9H972 538 aaKnown RBP28.86■■■□□ 2.21
PMPCB-205ENST00000453466 TOM1O60784 492 aa28.85■■■□□ 2.21
PMPCB-205ENST00000453466 RBM33Q96EV2 1170 aaKnown RBP28.85■■■□□ 2.21
PMPCB-205ENST00000453466 NRXN1Q9ULB1 1477 aa28.84■■■□□ 2.21
PMPCB-205ENST00000453466 CFAP70Q5T0N1 1121 aa28.82■■■□□ 2.2
PMPCB-205ENST00000453466 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
PMPCB-205ENST00000453466 NCOA3Q9Y6Q9 1424 aa28.8■■■□□ 2.2
PMPCB-205ENST00000453466 TMEM132EQ6IEE7 984 aa28.79■■■□□ 2.2
PMPCB-205ENST00000453466 L3MBTL2Q969R5 705 aa28.79■■■□□ 2.2
PMPCB-205ENST00000453466 STK26Q9P289 416 aa28.76■■■□□ 2.19
PMPCB-205ENST00000453466 MSH6P52701 1360 aa28.75■■■□□ 2.19
PMPCB-205ENST00000453466 SETD1AO15047 1707 aaKnown RBP28.75■■■□□ 2.19
PMPCB-205ENST00000453466 XRN1Q8IZH2 1706 aaKnown RBP28.74■■■□□ 2.19
PMPCB-205ENST00000453466 C19orf44Q9H6X5 657 aa28.74■■■□□ 2.19
PMPCB-205ENST00000453466 LRPPRCP42704 1394 aaKnown RBP28.73■■■□□ 2.19
PMPCB-205ENST00000453466 PIP4K2BP78356 416 aa28.72■■■□□ 2.19
PMPCB-205ENST00000453466 ABCC11Q96J66 1382 aa28.72■■■□□ 2.19
PMPCB-205ENST00000453466 SCAF1Q9H7N4 1312 aaKnown RBP28.71■■■□□ 2.19
PMPCB-205ENST00000453466 PTCH1Q13635 1447 aa28.7■■■□□ 2.19
PMPCB-205ENST00000453466 ROBO2Q9HCK4 1378 aa28.7■■■□□ 2.18
PMPCB-205ENST00000453466 PRAG1Q86YV5 1406 aa28.7■■■□□ 2.18
PMPCB-205ENST00000453466 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.18
PMPCB-205ENST00000453466 TIMELESSQ9UNS1 1208 aa28.69■■■□□ 2.18
PMPCB-205ENST00000453466 XIRP1Q702N8 1843 aaKnown RBP28.69■■■□□ 2.18
PMPCB-205ENST00000453466 LAMC1P11047 1609 aa28.69■■■□□ 2.18
PMPCB-205ENST00000453466 ATF3P18847 181 aa28.68■■■□□ 2.18
PMPCB-205ENST00000453466 TONSLQ96HA7 1378 aa28.67■■■□□ 2.18
PMPCB-205ENST00000453466 CADPS2Q86UW7 1296 aa28.66■■■□□ 2.18
PMPCB-205ENST00000453466 SIRT1Q96EB6 747 aa28.66■■■□□ 2.18
PMPCB-205ENST00000453466 ASXL1Q8IXJ9 1541 aa28.65■■■□□ 2.18
PMPCB-205ENST00000453466 TECPR2O15040 1411 aa28.65■■■□□ 2.18
PMPCB-205ENST00000453466 SLAIN2Q9P270 581 aa28.63■■■□□ 2.17
PMPCB-205ENST00000453466 WAPLQ7Z5K2 1190 aa28.62■■■□□ 2.17
PMPCB-205ENST00000453466 ADGRL3Q9HAR2 1447 aa28.6■■■□□ 2.17
PMPCB-205ENST00000453466 TRAK1Q9UPV9 953 aa28.59■■■□□ 2.17
PMPCB-205ENST00000453466 ADGRB1O14514 1584 aa28.59■■■□□ 2.17
PMPCB-205ENST00000453466 DCCP43146 1447 aa28.58■■■□□ 2.17
PMPCB-205ENST00000453466 FAM135BQ49AJ0 1406 aa28.58■■■□□ 2.17
PMPCB-205ENST00000453466 NBPF1Q3BBV0 1214 aa28.57■■■□□ 2.16
PMPCB-205ENST00000453466 POGKQ9P215 609 aa28.57■■■□□ 2.16
PMPCB-205ENST00000453466 PRAM1Q96QH2 718 aa28.56■■■□□ 2.16
PMPCB-205ENST00000453466 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.54■■■□□ 2.16
PMPCB-205ENST00000453466 PLEKHH1Q9ULM0 1364 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms