RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
SCAMP4-205ENST00000452128 HRCP23327 699 aa24.09■■□□□ 1.45
SCAMP4-205ENST00000452128 MYO5BQ9ULV0 1848 aa24.09■■□□□ 1.45
SCAMP4-205ENST00000452128 RAB3GAP2Q9H2M9 1393 aa24.08■■□□□ 1.45
SCAMP4-205ENST00000452128 HDGFP51858 240 aaKnown RBP24.08■■□□□ 1.45
SCAMP4-205ENST00000452128 FOXD1Q16676 465 aa24.08■■□□□ 1.45
SCAMP4-205ENST00000452128 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
SCAMP4-205ENST00000452128 SLC26A8Q96RN1 970 aa24.07■■□□□ 1.44
SCAMP4-205ENST00000452128 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
SCAMP4-205ENST00000452128 CLTCL1P53675 1640 aa24.06■■□□□ 1.44
SCAMP4-205ENST00000452128 TBX22Q9Y458 520 aa24.05■■□□□ 1.44
SCAMP4-205ENST00000452128 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
SCAMP4-205ENST00000452128 KCNA6P17658 529 aa24.03■■□□□ 1.44
SCAMP4-205ENST00000452128 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
SCAMP4-205ENST00000452128 NUTM2DQ5VT03 806 aaPredicted RBP24.02■■□□□ 1.44
SCAMP4-205ENST00000452128 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
SCAMP4-205ENST00000452128 NEXMIFQ5QGS0 1516 aa23.95■■□□□ 1.43
SCAMP4-205ENST00000452128 ALKQ9UM73 1620 aa23.95■■□□□ 1.42
SCAMP4-205ENST00000452128 SPATA31E1Q6ZUB1 1445 aa23.94■■□□□ 1.42
SCAMP4-205ENST00000452128 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
SCAMP4-205ENST00000452128 UBAP1LF5GYI3 381 aa23.94■■□□□ 1.42
SCAMP4-205ENST00000452128 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
SCAMP4-205ENST00000452128 SENP3Q9H4L4 574 aaPredicted RBP23.94■■□□□ 1.42
SCAMP4-205ENST00000452128 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
SCAMP4-205ENST00000452128 NWD1Q149M9 1564 aa23.91■■□□□ 1.42
SCAMP4-205ENST00000452128 BCANQ96GW7 911 aa23.91■■□□□ 1.42
SCAMP4-205ENST00000452128 SETBP1Q9Y6X0 1596 aa23.91■■□□□ 1.42
SCAMP4-205ENST00000452128 NRXN3Q9Y4C0 1643 aa23.9■■□□□ 1.42
SCAMP4-205ENST00000452128 ANKRD30BQ9BXX2 1392 aa23.9■■□□□ 1.42
SCAMP4-205ENST00000452128 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
SCAMP4-205ENST00000452128 PTPRUQ92729 1446 aa23.89■■□□□ 1.41
SCAMP4-205ENST00000452128 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
SCAMP4-205ENST00000452128 DIP2AQ14689 1571 aa23.88■■□□□ 1.41
SCAMP4-205ENST00000452128 KIF1BO60333 1816 aa23.87■■□□□ 1.41
SCAMP4-205ENST00000452128 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
SCAMP4-205ENST00000452128 TOM1O60784 492 aa23.87■■□□□ 1.41
SCAMP4-205ENST00000452128 NKTRP30414 1462 aaKnown RBP23.87■■□□□ 1.41
SCAMP4-205ENST00000452128 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
SCAMP4-205ENST00000452128 METP08581 1390 aa23.86■■□□□ 1.41
SCAMP4-205ENST00000452128 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
SCAMP4-205ENST00000452128 XIRP1Q702N8 1843 aaKnown RBP23.85■■□□□ 1.41
SCAMP4-205ENST00000452128 RBM33Q96EV2 1170 aaKnown RBP23.84■■□□□ 1.41
SCAMP4-205ENST00000452128 AMOTL2Q9Y2J4 779 aa23.82■■□□□ 1.4
SCAMP4-205ENST00000452128 NCOA3Q9Y6Q9 1424 aa23.81■■□□□ 1.4
SCAMP4-205ENST00000452128 ADGRF5Q8IZF2 1346 aa23.81■■□□□ 1.4
SCAMP4-205ENST00000452128 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
SCAMP4-205ENST00000452128 PPLO60437 1756 aa23.77■■□□□ 1.4
SCAMP4-205ENST00000452128 PIP4K2BP78356 416 aa23.76■■□□□ 1.39
SCAMP4-205ENST00000452128 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
SCAMP4-205ENST00000452128 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
SCAMP4-205ENST00000452128 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
SCAMP4-205ENST00000452128 HSPA1LP34931 641 aa23.72■■□□□ 1.39
SCAMP4-205ENST00000452128 NRXN1Q9ULB1 1477 aa23.71■■□□□ 1.39
SCAMP4-205ENST00000452128 FAM135BQ49AJ0 1406 aa23.71■■□□□ 1.39
SCAMP4-205ENST00000452128 C19orf44Q9H6X5 657 aa23.7■■□□□ 1.38
SCAMP4-205ENST00000452128 IFT172Q9UG01 1749 aa23.7■■□□□ 1.38
SCAMP4-205ENST00000452128 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
SCAMP4-205ENST00000452128 MSH6P52701 1360 aa23.68■■□□□ 1.38
SCAMP4-205ENST00000452128 C14orf93Q9H972 538 aaKnown RBP23.67■■□□□ 1.38
SCAMP4-205ENST00000452128 SLAIN2Q9P270 581 aa23.67■■□□□ 1.38
SCAMP4-205ENST00000452128 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
SCAMP4-205ENST00000452128 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
SCAMP4-205ENST00000452128 MYOM2P54296 1465 aa23.65■■□□□ 1.38
SCAMP4-205ENST00000452128 SCAF1Q9H7N4 1312 aaKnown RBP23.64■■□□□ 1.38
SCAMP4-205ENST00000452128 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.37
SCAMP4-205ENST00000452128 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
SCAMP4-205ENST00000452128 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
SCAMP4-205ENST00000452128 STAC3Q96MF2 364 aa23.61■■□□□ 1.37
SCAMP4-205ENST00000452128 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
SCAMP4-205ENST00000452128 CFAP70Q5T0N1 1121 aa23.6■■□□□ 1.37
SCAMP4-205ENST00000452128 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
SCAMP4-205ENST00000452128 CADPS2Q86UW7 1296 aa23.6■■□□□ 1.37
SCAMP4-205ENST00000452128 LRPPRCP42704 1394 aaKnown RBP23.6■■□□□ 1.37
SCAMP4-205ENST00000452128 TECPR2O15040 1411 aa23.59■■□□□ 1.37
SCAMP4-205ENST00000452128 DCCP43146 1447 aa23.59■■□□□ 1.37
SCAMP4-205ENST00000452128 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
SCAMP4-205ENST00000452128 ADGRL3Q9HAR2 1447 aa23.58■■□□□ 1.36
SCAMP4-205ENST00000452128 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
SCAMP4-205ENST00000452128 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
SCAMP4-205ENST00000452128 DCAF11Q8TEB1 546 aa23.56■■□□□ 1.36
SCAMP4-205ENST00000452128 ATF3P18847 181 aa23.55■■□□□ 1.36
SCAMP4-205ENST00000452128 YTHDC2Q9H6S0 1430 aaKnown RBP23.53■■□□□ 1.36
SCAMP4-205ENST00000452128 MST1RQ04912 1400 aa23.52■■□□□ 1.36
SCAMP4-205ENST00000452128 KDM2AQ9Y2K7 1162 aa23.52■■□□□ 1.36
SCAMP4-205ENST00000452128 ROBO1Q9Y6N7 1651 aa23.51■■□□□ 1.35
SCAMP4-205ENST00000452128 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
SCAMP4-205ENST00000452128 STK26Q9P289 416 aa23.51■■□□□ 1.35
SCAMP4-205ENST00000452128 BRINP3Q76B58 766 aa23.5■■□□□ 1.35
SCAMP4-205ENST00000452128 ADGRB1O14514 1584 aa23.49■■□□□ 1.35
SCAMP4-205ENST00000452128 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
SCAMP4-205ENST00000452128 SIN3AQ96ST3 1273 aa23.48■■□□□ 1.35
SCAMP4-205ENST00000452128 NALCNQ8IZF0 1738 aa23.47■■□□□ 1.35
SCAMP4-205ENST00000452128 LAMC1P11047 1609 aa23.44■■□□□ 1.34
SCAMP4-205ENST00000452128 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
SCAMP4-205ENST00000452128 KNDC1Q76NI1 1749 aa23.43■■□□□ 1.34
SCAMP4-205ENST00000452128 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
SCAMP4-205ENST00000452128 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
SCAMP4-205ENST00000452128 AHDC1Q5TGY3 1603 aaPredicted RBP23.4■■□□□ 1.34
SCAMP4-205ENST00000452128 DISP3Q9P2K9 1392 aa23.4■■□□□ 1.34
SCAMP4-205ENST00000452128 PRAM1Q96QH2 718 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms