RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 LRRC7Q96NW7 1537 aa26.96■■□□□ 1.91
CTNS-204ENST00000452111 MYO5BQ9ULV0 1848 aa26.95■■□□□ 1.91
CTNS-204ENST00000452111 HDGFP51858 240 aaKnown RBP26.95■■□□□ 1.9
CTNS-204ENST00000452111 NUTM2DQ5VT03 806 aaPredicted RBP26.93■■□□□ 1.9
CTNS-204ENST00000452111 PLEKHG1Q9ULL1 1385 aa26.93■■□□□ 1.9
CTNS-204ENST00000452111 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
CTNS-204ENST00000452111 TOM1O60784 492 aa26.92■■□□□ 1.9
CTNS-204ENST00000452111 SPHKAPQ2M3C7 1700 aa26.92■■□□□ 1.9
CTNS-204ENST00000452111 PIP4K2BP78356 416 aa26.91■■□□□ 1.9
CTNS-204ENST00000452111 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.91■■□□□ 1.9
CTNS-204ENST00000452111 SLC4A1APQ9BWU0 796 aaKnown RBP26.9■■□□□ 1.9
CTNS-204ENST00000452111 KCNA6P17658 529 aa26.88■■□□□ 1.89
CTNS-204ENST00000452111 TRPM2O94759 1503 aa26.86■■□□□ 1.89
CTNS-204ENST00000452111 ZNF326Q5BKZ1 582 aaKnown RBP26.85■■□□□ 1.89
CTNS-204ENST00000452111 CLTCL1P53675 1640 aa26.83■■□□□ 1.89
CTNS-204ENST00000452111 ALKQ9UM73 1620 aa26.81■■□□□ 1.88
CTNS-204ENST00000452111 TMEM94Q12767 1356 aa26.81■■□□□ 1.88
CTNS-204ENST00000452111 RBM33Q96EV2 1170 aaKnown RBP26.8■■□□□ 1.88
CTNS-204ENST00000452111 ADAMTS13Q76LX8 1427 aa26.8■■□□□ 1.88
CTNS-204ENST00000452111 FOXD1Q16676 465 aa26.79■■□□□ 1.88
CTNS-204ENST00000452111 PROSER2Q86WR7 435 aaPredicted RBP26.79■■□□□ 1.88
CTNS-204ENST00000452111 TBX22Q9Y458 520 aa26.79■■□□□ 1.88
CTNS-204ENST00000452111 NWD1Q149M9 1564 aa26.79■■□□□ 1.88
CTNS-204ENST00000452111 NKTRP30414 1462 aaKnown RBP26.78■■□□□ 1.88
CTNS-204ENST00000452111 SETD5Q9C0A6 1442 aa26.75■■□□□ 1.87
CTNS-204ENST00000452111 HSPA1LP34931 641 aa26.75■■□□□ 1.87
CTNS-204ENST00000452111 MPHOSPH9Q99550 1183 aa26.74■■□□□ 1.87
CTNS-204ENST00000452111 DIP2AQ14689 1571 aa26.73■■□□□ 1.87
CTNS-204ENST00000452111 XIRP1Q702N8 1843 aaKnown RBP26.73■■□□□ 1.87
CTNS-204ENST00000452111 NEXMIFQ5QGS0 1516 aa26.7■■□□□ 1.87
CTNS-204ENST00000452111 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
CTNS-204ENST00000452111 KIF1BO60333 1816 aa26.68■■□□□ 1.86
CTNS-204ENST00000452111 RAB3GAP2Q9H2M9 1393 aa26.68■■□□□ 1.86
CTNS-204ENST00000452111 SETBP1Q9Y6X0 1596 aa26.67■■□□□ 1.86
CTNS-204ENST00000452111 CHD2O14647 1828 aaKnown RBP26.67■■□□□ 1.86
CTNS-204ENST00000452111 NRXN3Q9Y4C0 1643 aa26.66■■□□□ 1.86
CTNS-204ENST00000452111 CCDC144AA2RUR9 1427 aa26.65■■□□□ 1.86
CTNS-204ENST00000452111 MSH6P52701 1360 aa26.65■■□□□ 1.86
CTNS-204ENST00000452111 DISP3Q9P2K9 1392 aa26.65■■□□□ 1.86
CTNS-204ENST00000452111 PTPRUQ92729 1446 aa26.65■■□□□ 1.86
CTNS-204ENST00000452111 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
CTNS-204ENST00000452111 AMOTL2Q9Y2J4 779 aa26.64■■□□□ 1.86
CTNS-204ENST00000452111 C14orf37Q86TY3 774 aa26.62■■□□□ 1.85
CTNS-204ENST00000452111 METP08581 1390 aa26.61■■□□□ 1.85
CTNS-204ENST00000452111 RPGRIP1LQ68CZ1 1315 aa26.61■■□□□ 1.85
CTNS-204ENST00000452111 VGFO15240 615 aaPredicted RBP26.6■■□□□ 1.85
CTNS-204ENST00000452111 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
CTNS-204ENST00000452111 FAM135BQ49AJ0 1406 aa26.56■■□□□ 1.84
CTNS-204ENST00000452111 NCOA3Q9Y6Q9 1424 aa26.56■■□□□ 1.84
CTNS-204ENST00000452111 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
CTNS-204ENST00000452111 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
CTNS-204ENST00000452111 SLAIN2Q9P270 581 aa26.52■■□□□ 1.84
CTNS-204ENST00000452111 C19orf44Q9H6X5 657 aa26.5■■□□□ 1.83
CTNS-204ENST00000452111 PPLO60437 1756 aa26.5■■□□□ 1.83
CTNS-204ENST00000452111 ROBO1Q9Y6N7 1651 aa26.49■■□□□ 1.83
CTNS-204ENST00000452111 ADGRF5Q8IZF2 1346 aa26.48■■□□□ 1.83
CTNS-204ENST00000452111 ATF3P18847 181 aa26.48■■□□□ 1.83
CTNS-204ENST00000452111 CADPS2Q86UW7 1296 aa26.48■■□□□ 1.83
CTNS-204ENST00000452111 ANKRD30BQ9BXX2 1392 aa26.46■■□□□ 1.83
CTNS-204ENST00000452111 MED1Q15648 1581 aaPredicted RBP26.45■■□□□ 1.82
CTNS-204ENST00000452111 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.82
CTNS-204ENST00000452111 SETD1AO15047 1707 aaKnown RBP26.44■■□□□ 1.82
CTNS-204ENST00000452111 HRCP23327 699 aa26.43■■□□□ 1.82
CTNS-204ENST00000452111 ILDR2Q71H61 639 aa26.42■■□□□ 1.82
CTNS-204ENST00000452111 DCCP43146 1447 aa26.4■■□□□ 1.82
CTNS-204ENST00000452111 PTCH1Q13635 1447 aa26.4■■□□□ 1.82
CTNS-204ENST00000452111 ROBO2Q9HCK4 1378 aa26.4■■□□□ 1.82
CTNS-204ENST00000452111 ADGRL3Q9HAR2 1447 aa26.39■■□□□ 1.82
CTNS-204ENST00000452111 IFT172Q9UG01 1749 aa26.38■■□□□ 1.81
CTNS-204ENST00000452111 PIK3C2GO75747 1445 aa26.37■■□□□ 1.81
CTNS-204ENST00000452111 PRAG1Q86YV5 1406 aa26.35■■□□□ 1.81
CTNS-204ENST00000452111 MST1RQ04912 1400 aa26.33■■□□□ 1.81
CTNS-204ENST00000452111 BRINP3Q76B58 766 aa26.33■■□□□ 1.81
CTNS-204ENST00000452111 PHF23Q9BUL5 403 aaPredicted RBP26.33■■□□□ 1.81
CTNS-204ENST00000452111 NALCNQ8IZF0 1738 aa26.32■■□□□ 1.8
CTNS-204ENST00000452111 TMEM132EQ6IEE7 984 aa26.32■■□□□ 1.8
CTNS-204ENST00000452111 STK26Q9P289 416 aa26.32■■□□□ 1.8
CTNS-204ENST00000452111 PHLPP1O60346 1717 aa26.31■■□□□ 1.8
CTNS-204ENST00000452111 MYOM2P54296 1465 aa26.3■■□□□ 1.8
CTNS-204ENST00000452111 ASXL1Q8IXJ9 1541 aa26.3■■□□□ 1.8
CTNS-204ENST00000452111 LRPPRCP42704 1394 aaKnown RBP26.28■■□□□ 1.8
CTNS-204ENST00000452111 NRXN1Q9ULB1 1477 aa26.28■■□□□ 1.8
CTNS-204ENST00000452111 COL16A1Q07092 1604 aaPredicted RBP26.26■■□□□ 1.79
CTNS-204ENST00000452111 AHDC1Q5TGY3 1603 aaPredicted RBP26.26■■□□□ 1.79
CTNS-204ENST00000452111 JCADQ9P266 1359 aa26.26■■□□□ 1.79
CTNS-204ENST00000452111 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
CTNS-204ENST00000452111 TECPR2O15040 1411 aa26.25■■□□□ 1.79
CTNS-204ENST00000452111 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
CTNS-204ENST00000452111 ABCC11Q96J66 1382 aa26.24■■□□□ 1.79
CTNS-204ENST00000452111 YTHDC2Q9H6S0 1430 aaKnown RBP26.23■■□□□ 1.79
CTNS-204ENST00000452111 WAPLQ7Z5K2 1190 aa26.23■■□□□ 1.79
CTNS-204ENST00000452111 DCAF11Q8TEB1 546 aa26.22■■□□□ 1.79
CTNS-204ENST00000452111 KDM2AQ9Y2K7 1162 aa26.22■■□□□ 1.79
CTNS-204ENST00000452111 C1orf167Q5SNV9 1468 aa26.22■■□□□ 1.79
CTNS-204ENST00000452111 PLEKHH1Q9ULM0 1364 aa26.2■■□□□ 1.79
CTNS-204ENST00000452111 DDX17Q92841 729 aaKnown RBP26.19■■□□□ 1.78
CTNS-204ENST00000452111 DHX57Q6P158 1386 aaKnown RBP26.19■■□□□ 1.78
CTNS-204ENST00000452111 LAMC1P11047 1609 aa26.17■■□□□ 1.78
CTNS-204ENST00000452111 KNDC1Q76NI1 1749 aa26.17■■□□□ 1.78
CTNS-204ENST00000452111 ORAI2Q96SN7 254 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms