RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
COL8A1-203ENST00000452013 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
COL8A1-203ENST00000452013 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
COL8A1-203ENST00000452013 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
COL8A1-203ENST00000452013 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
COL8A1-203ENST00000452013 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
COL8A1-203ENST00000452013 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
COL8A1-203ENST00000452013 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-203ENST00000452013 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
COL8A1-203ENST00000452013 KCNA6P17658 529 aa12.96□□□□□ -0.33
COL8A1-203ENST00000452013 TMEM131LA2VDJ0 1609 aa12.95□□□□□ -0.34
COL8A1-203ENST00000452013 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
COL8A1-203ENST00000452013 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
COL8A1-203ENST00000452013 SPHKAPQ2M3C7 1700 aa12.93□□□□□ -0.34
COL8A1-203ENST00000452013 STAC3Q96MF2 364 aa12.92□□□□□ -0.34
COL8A1-203ENST00000452013 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
COL8A1-203ENST00000452013 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-203ENST00000452013 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
COL8A1-203ENST00000452013 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
COL8A1-203ENST00000452013 LTBP4Q8N2S1 1624 aa12.9□□□□□ -0.34
COL8A1-203ENST00000452013 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
COL8A1-203ENST00000452013 CPS1P31327 1500 aa12.89□□□□□ -0.35
COL8A1-203ENST00000452013 AMOTL2Q9Y2J4 779 aa12.89□□□□□ -0.35
COL8A1-203ENST00000452013 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
COL8A1-203ENST00000452013 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-203ENST00000452013 TOM1O60784 492 aa12.88□□□□□ -0.35
COL8A1-203ENST00000452013 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
COL8A1-203ENST00000452013 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
COL8A1-203ENST00000452013 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
COL8A1-203ENST00000452013 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
COL8A1-203ENST00000452013 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
COL8A1-203ENST00000452013 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
COL8A1-203ENST00000452013 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
COL8A1-203ENST00000452013 NEXMIFQ5QGS0 1516 aa12.85□□□□□ -0.35
COL8A1-203ENST00000452013 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
COL8A1-203ENST00000452013 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
COL8A1-203ENST00000452013 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
COL8A1-203ENST00000452013 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.35
COL8A1-203ENST00000452013 METP08581 1390 aa12.83□□□□□ -0.36
COL8A1-203ENST00000452013 TMEM94Q12767 1356 aa12.83□□□□□ -0.36
COL8A1-203ENST00000452013 C14orf37Q86TY3 774 aa12.83□□□□□ -0.36
COL8A1-203ENST00000452013 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
COL8A1-203ENST00000452013 RBM33Q96EV2 1170 aaKnown RBP12.82□□□□□ -0.36
COL8A1-203ENST00000452013 KIF1BO60333 1816 aa12.82□□□□□ -0.36
COL8A1-203ENST00000452013 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
COL8A1-203ENST00000452013 SETBP1Q9Y6X0 1596 aa12.81□□□□□ -0.36
COL8A1-203ENST00000452013 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
COL8A1-203ENST00000452013 CFAP70Q5T0N1 1121 aa12.81□□□□□ -0.36
COL8A1-203ENST00000452013 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
COL8A1-203ENST00000452013 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
COL8A1-203ENST00000452013 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
COL8A1-203ENST00000452013 NKTRP30414 1462 aaKnown RBP12.79□□□□□ -0.36
COL8A1-203ENST00000452013 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
COL8A1-203ENST00000452013 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
COL8A1-203ENST00000452013 STK26Q9P289 416 aa12.79□□□□□ -0.36
COL8A1-203ENST00000452013 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
COL8A1-203ENST00000452013 MSH6P52701 1360 aa12.79□□□□□ -0.36
COL8A1-203ENST00000452013 ATF3P18847 181 aa12.78□□□□□ -0.36
COL8A1-203ENST00000452013 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
COL8A1-203ENST00000452013 MYO5BQ9ULV0 1848 aa12.78□□□□□ -0.36
COL8A1-203ENST00000452013 PIK3C2GO75747 1445 aa12.78□□□□□ -0.36
COL8A1-203ENST00000452013 MYOM2P54296 1465 aa12.78□□□□□ -0.36
COL8A1-203ENST00000452013 CADPS2Q86UW7 1296 aa12.77□□□□□ -0.37
COL8A1-203ENST00000452013 ALKQ9UM73 1620 aa12.77□□□□□ -0.37
COL8A1-203ENST00000452013 LRPPRCP42704 1394 aaKnown RBP12.76□□□□□ -0.37
COL8A1-203ENST00000452013 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
COL8A1-203ENST00000452013 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
COL8A1-203ENST00000452013 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
COL8A1-203ENST00000452013 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
COL8A1-203ENST00000452013 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
COL8A1-203ENST00000452013 POGKQ9P215 609 aa12.73□□□□□ -0.37
COL8A1-203ENST00000452013 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
COL8A1-203ENST00000452013 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
COL8A1-203ENST00000452013 ROBO2Q9HCK4 1378 aa12.72□□□□□ -0.37
COL8A1-203ENST00000452013 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
COL8A1-203ENST00000452013 CCER1Q8TC90 406 aaPredicted RBP12.72□□□□□ -0.37
COL8A1-203ENST00000452013 TRAK1Q9UPV9 953 aa12.72□□□□□ -0.37
COL8A1-203ENST00000452013 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.37
COL8A1-203ENST00000452013 PPLO60437 1756 aa12.71□□□□□ -0.37
COL8A1-203ENST00000452013 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
COL8A1-203ENST00000452013 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
COL8A1-203ENST00000452013 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
COL8A1-203ENST00000452013 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
COL8A1-203ENST00000452013 PRAG1Q86YV5 1406 aa12.7□□□□□ -0.38
COL8A1-203ENST00000452013 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
COL8A1-203ENST00000452013 PRAM1Q96QH2 718 aa12.69□□□□□ -0.38
COL8A1-203ENST00000452013 TECPR2O15040 1411 aa12.69□□□□□ -0.38
COL8A1-203ENST00000452013 HSPA1LP34931 641 aa12.68□□□□□ -0.38
COL8A1-203ENST00000452013 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
COL8A1-203ENST00000452013 DCCP43146 1447 aa12.67□□□□□ -0.38
COL8A1-203ENST00000452013 ADGRL3Q9HAR2 1447 aa12.67□□□□□ -0.38
COL8A1-203ENST00000452013 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL8A1-203ENST00000452013 XRN1Q8IZH2 1706 aaKnown RBP12.65□□□□□ -0.38
COL8A1-203ENST00000452013 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
COL8A1-203ENST00000452013 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
COL8A1-203ENST00000452013 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
COL8A1-203ENST00000452013 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
COL8A1-203ENST00000452013 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
COL8A1-203ENST00000452013 LAMC1P11047 1609 aa12.62□□□□□ -0.39
COL8A1-203ENST00000452013 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms