RNA–Protein interactions for RNA: ENST00000451689.1

FAM49A-204, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-204ENST00000451689 EFCAB5A4FU69 1503 aa8.51□□□□□ -1.05
FAM49A-204ENST00000451689 OSBPP22059 807 aa8.51□□□□□ -1.05
FAM49A-204ENST00000451689 PTPREP23469 700 aa8.51□□□□□ -1.05
FAM49A-204ENST00000451689 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
FAM49A-204ENST00000451689 EPAS1Q99814 870 aa8.51□□□□□ -1.05
FAM49A-204ENST00000451689 PCF11O94913 1555 aaKnown RBP8.5□□□□□ -1.05
FAM49A-204ENST00000451689 COL9A1P20849 921 aa8.5□□□□□ -1.05
FAM49A-204ENST00000451689 IQGAP2Q13576 1575 aa8.5□□□□□ -1.05
FAM49A-204ENST00000451689 TSR1Q2NL82 804 aaKnown RBP8.5□□□□□ -1.05
FAM49A-204ENST00000451689 C6orf132Q5T0Z8 1188 aa8.5□□□□□ -1.05
FAM49A-204ENST00000451689 CFAP43Q8NDM7 1665 aa8.49□□□□□ -1.05
FAM49A-204ENST00000451689 MAP3K7O43318 606 aa8.49□□□□□ -1.05
FAM49A-204ENST00000451689 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
FAM49A-204ENST00000451689 SYNJ2O15056 1496 aa8.49□□□□□ -1.05
FAM49A-204ENST00000451689 UGGT2Q9NYU1 1516 aa8.49□□□□□ -1.05
FAM49A-204ENST00000451689 NUP160Q12769 1436 aa8.48□□□□□ -1.05
FAM49A-204ENST00000451689 UBTFP17480 764 aaKnown RBP8.48□□□□□ -1.05
FAM49A-204ENST00000451689 KCNH8Q96L42 1107 aa8.48□□□□□ -1.05
FAM49A-204ENST00000451689 EN1Q05925 392 aaPredicted RBP8.47□□□□□ -1.05
FAM49A-204ENST00000451689 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
FAM49A-204ENST00000451689 SHROOM2Q13796 1616 aa8.46□□□□□ -1.06
FAM49A-204ENST00000451689 DISP1Q96F81 1524 aa8.45□□□□□ -1.06
FAM49A-204ENST00000451689 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
FAM49A-204ENST00000451689 ADGRD1Q6QNK2 874 aa8.45□□□□□ -1.06
FAM49A-204ENST00000451689 TESPA1A2RU30 521 aaPredicted RBP8.44□□□□□ -1.06
FAM49A-204ENST00000451689 PROX2Q3B8N5 592 aa8.44□□□□□ -1.06
FAM49A-204ENST00000451689 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
FAM49A-204ENST00000451689 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
FAM49A-204ENST00000451689 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
FAM49A-204ENST00000451689 CDHR5Q9HBB8 845 aa8.43□□□□□ -1.06
FAM49A-204ENST00000451689 FHOD3Q2V2M9 1422 aa8.43□□□□□ -1.06
FAM49A-204ENST00000451689 CLASP1Q7Z460 1538 aa8.43□□□□□ -1.06
FAM49A-204ENST00000451689 KIAA0586Q9BVV6 1533 aa8.43□□□□□ -1.06
FAM49A-204ENST00000451689 TIAM1Q13009 1591 aa8.43□□□□□ -1.06
FAM49A-204ENST00000451689 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
FAM49A-204ENST00000451689 MAP3K1Q13233 1512 aa8.41□□□□□ -1.06
FAM49A-204ENST00000451689 NUTM2FA1L443 756 aa8.41□□□□□ -1.06
FAM49A-204ENST00000451689 TK2O00142 265 aa8.41□□□□□ -1.06
FAM49A-204ENST00000451689 RBM26Q5T8P6 1007 aaKnown RBP8.41□□□□□ -1.06
FAM49A-204ENST00000451689 FYCO1Q9BQS8 1478 aa8.4□□□□□ -1.06
FAM49A-204ENST00000451689 HRO43593 1189 aa8.39□□□□□ -1.07
FAM49A-204ENST00000451689 SLC4A5Q9BY07 1137 aa8.39□□□□□ -1.07
FAM49A-204ENST00000451689 NPDC1Q9NQX5 325 aaPredicted RBP8.39□□□□□ -1.07
FAM49A-204ENST00000451689 KIAA1468Q9P260 1216 aa8.39□□□□□ -1.07
FAM49A-204ENST00000451689 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
FAM49A-204ENST00000451689 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
FAM49A-204ENST00000451689 ERCC6L2Q5T890 1561 aa8.38□□□□□ -1.07
FAM49A-204ENST00000451689 CASKIN1Q8WXD9 1431 aa8.37□□□□□ -1.07
FAM49A-204ENST00000451689 SMYD5Q6GMV2 418 aa8.37□□□□□ -1.07
FAM49A-204ENST00000451689 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
FAM49A-204ENST00000451689 BHMG1C9JSJ3 638 aaPredicted RBP8.36□□□□□ -1.07
FAM49A-204ENST00000451689 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
FAM49A-204ENST00000451689 TRIM6-TRIM34B2RNG4 842 aa8.35□□□□□ -1.07
FAM49A-204ENST00000451689 PRSS12P56730 875 aa8.35□□□□□ -1.07
FAM49A-204ENST00000451689 FAM198AQ9UFP1 575 aa8.35□□□□□ -1.07
FAM49A-204ENST00000451689 HECW1Q76N89 1606 aa8.35□□□□□ -1.07
FAM49A-204ENST00000451689 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
FAM49A-204ENST00000451689 C3orf80F5H4A9 247 aa8.34□□□□□ -1.07
FAM49A-204ENST00000451689 RANGAP1P46060 587 aaPredicted RBP8.34□□□□□ -1.07
FAM49A-204ENST00000451689 SEPT9Q9UHD8 586 aaPredicted RBP8.34□□□□□ -1.07
FAM49A-204ENST00000451689 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
FAM49A-204ENST00000451689 ABCA8O94911 1581 aa8.34□□□□□ -1.07
FAM49A-204ENST00000451689 ARHGEF11O15085 1522 aa8.34□□□□□ -1.08
FAM49A-204ENST00000451689 LRRC9Q6ZRR7 1453 aa8.33□□□□□ -1.08
FAM49A-204ENST00000451689 SMAPO00193 183 aa8.33□□□□□ -1.08
FAM49A-204ENST00000451689 PTGDRQ13258 359 aa8.33□□□□□ -1.08
FAM49A-204ENST00000451689 PPARGC1BQ86YN6 1023 aaKnown RBP8.33□□□□□ -1.08
FAM49A-204ENST00000451689 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
FAM49A-204ENST00000451689 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
FAM49A-204ENST00000451689 FMN1Q68DA7 1419 aa8.32□□□□□ -1.08
FAM49A-204ENST00000451689 MYT1Q01538 1121 aa8.32□□□□□ -1.08
FAM49A-204ENST00000451689 KANK4Q5T7N3 995 aaPredicted RBP8.32□□□□□ -1.08
FAM49A-204ENST00000451689 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
FAM49A-204ENST00000451689 PACS2Q86VP3 889 aa8.32□□□□□ -1.08
FAM49A-204ENST00000451689 CERKQ8TCT0 537 aa8.32□□□□□ -1.08
FAM49A-204ENST00000451689 CDK13Q14004 1512 aaKnown RBP8.31□□□□□ -1.08
FAM49A-204ENST00000451689 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
FAM49A-204ENST00000451689 EPRSP07814 1512 aaKnown RBP8.3□□□□□ -1.08
FAM49A-204ENST00000451689 GOLGA8CPA6NN73 597 aa8.3□□□□□ -1.08
FAM49A-204ENST00000451689 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
FAM49A-204ENST00000451689 FCHSD2O94868 740 aa8.3□□□□□ -1.08
FAM49A-204ENST00000451689 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
FAM49A-204ENST00000451689 NBPF3Q9H094 633 aa8.3□□□□□ -1.08
FAM49A-204ENST00000451689 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
FAM49A-204ENST00000451689 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
FAM49A-204ENST00000451689 ZEB1P37275 1124 aaPredicted RBP8.29□□□□□ -1.08
FAM49A-204ENST00000451689 TRIM26Q12899 539 aaPredicted RBP8.29□□□□□ -1.08
FAM49A-204ENST00000451689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.29□□□□□ -1.08
FAM49A-204ENST00000451689 PLB1Q6P1J6 1458 aa8.29□□□□□ -1.08
FAM49A-204ENST00000451689 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
FAM49A-204ENST00000451689 FECHP22830 423 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 NUDT18Q6ZVK8 323 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 TTC13Q8NBP0 860 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 TATDN2Q93075 761 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 PCGF6Q9BYE7 350 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
FAM49A-204ENST00000451689 TULP1O00294 542 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-204ENST00000451689 CHMP7Q8WUX9 453 aaPredicted RBP8.27□□□□□ -1.09
FAM49A-204ENST00000451689 WNT2BQ93097 391 aa8.27□□□□□ -1.09
FAM49A-204ENST00000451689 CCDC18Q5T9S5 1454 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms