RNA–Protein interactions for RNA: ENST00000451689.1

FAM49A-204, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-204ENST00000451689 AEBP2Q6ZN18 517 aaPredicted RBP19.73■□□□□ 0.75
FAM49A-204ENST00000451689 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
FAM49A-204ENST00000451689 PHF23Q9BUL5 403 aaPredicted RBP16.83■□□□□ 0.28
FAM49A-204ENST00000451689 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
FAM49A-204ENST00000451689 FOXD1Q16676 465 aa15.56■□□□□ 0.08
FAM49A-204ENST00000451689 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
FAM49A-204ENST00000451689 PPP6R1Q9UPN7 881 aa14.93□□□□□ -0.02
FAM49A-204ENST00000451689 ADRA2BP18089 450 aa14.91□□□□□ -0.02
FAM49A-204ENST00000451689 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
FAM49A-204ENST00000451689 MSH5O43196 834 aa14.69□□□□□ -0.06
FAM49A-204ENST00000451689 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
FAM49A-204ENST00000451689 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
FAM49A-204ENST00000451689 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
FAM49A-204ENST00000451689 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
FAM49A-204ENST00000451689 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
FAM49A-204ENST00000451689 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
FAM49A-204ENST00000451689 KCNA4P22459 653 aa13.19□□□□□ -0.3
FAM49A-204ENST00000451689 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
FAM49A-204ENST00000451689 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
FAM49A-204ENST00000451689 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
FAM49A-204ENST00000451689 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
FAM49A-204ENST00000451689 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
FAM49A-204ENST00000451689 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
FAM49A-204ENST00000451689 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
FAM49A-204ENST00000451689 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
FAM49A-204ENST00000451689 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
FAM49A-204ENST00000451689 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
FAM49A-204ENST00000451689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
FAM49A-204ENST00000451689 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
FAM49A-204ENST00000451689 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
FAM49A-204ENST00000451689 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
FAM49A-204ENST00000451689 ZBTB22O15209 634 aa12.15□□□□□ -0.46
FAM49A-204ENST00000451689 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
FAM49A-204ENST00000451689 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
FAM49A-204ENST00000451689 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
FAM49A-204ENST00000451689 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
FAM49A-204ENST00000451689 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
FAM49A-204ENST00000451689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
FAM49A-204ENST00000451689 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
FAM49A-204ENST00000451689 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
FAM49A-204ENST00000451689 CAPN15O75808 1086 aa11.86□□□□□ -0.51
FAM49A-204ENST00000451689 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
FAM49A-204ENST00000451689 ATF5Q9Y2D1 282 aaPredicted RBP11.8□□□□□ -0.52
FAM49A-204ENST00000451689 APLP2Q06481 763 aa11.78□□□□□ -0.52
FAM49A-204ENST00000451689 ZNF219Q9P2Y4 722 aaPredicted RBP11.68□□□□□ -0.54
FAM49A-204ENST00000451689 ABCB7O75027 752 aa11.67□□□□□ -0.54
FAM49A-204ENST00000451689 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
FAM49A-204ENST00000451689 DSG3P32926 999 aa11.66□□□□□ -0.54
FAM49A-204ENST00000451689 POTEHQ6S545 545 aa11.58□□□□□ -0.56
FAM49A-204ENST00000451689 POLA2Q14181 598 aa11.57□□□□□ -0.56
FAM49A-204ENST00000451689 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
FAM49A-204ENST00000451689 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
FAM49A-204ENST00000451689 FBLN2P98095 1184 aa11.21□□□□□ -0.61
FAM49A-204ENST00000451689 OSCARQ8IYS5 282 aa11.17□□□□□ -0.62
FAM49A-204ENST00000451689 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
FAM49A-204ENST00000451689 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
FAM49A-204ENST00000451689 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
FAM49A-204ENST00000451689 SPDYE6P0CI01 402 aa10.97□□□□□ -0.65
FAM49A-204ENST00000451689 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
FAM49A-204ENST00000451689 CHRDL2Q6WN34 429 aa10.96□□□□□ -0.65
FAM49A-204ENST00000451689 CCDC180Q9P1Z9 1646 aa10.94□□□□□ -0.66
FAM49A-204ENST00000451689 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
FAM49A-204ENST00000451689 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
FAM49A-204ENST00000451689 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
FAM49A-204ENST00000451689 REM2Q8IYK8 340 aaPredicted RBP10.87□□□□□ -0.67
FAM49A-204ENST00000451689 FKBP8Q14318 412 aa10.83□□□□□ -0.68
FAM49A-204ENST00000451689 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
FAM49A-204ENST00000451689 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
FAM49A-204ENST00000451689 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
FAM49A-204ENST00000451689 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
FAM49A-204ENST00000451689 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
FAM49A-204ENST00000451689 PROM2Q8N271 834 aa10.65□□□□□ -0.7
FAM49A-204ENST00000451689 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
FAM49A-204ENST00000451689 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
FAM49A-204ENST00000451689 HAX1O00165 279 aa10.56□□□□□ -0.72
FAM49A-204ENST00000451689 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
FAM49A-204ENST00000451689 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
FAM49A-204ENST00000451689 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
FAM49A-204ENST00000451689 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
FAM49A-204ENST00000451689 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
FAM49A-204ENST00000451689 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
FAM49A-204ENST00000451689 FBXO3Q9UK99 471 aa10.4□□□□□ -0.74
FAM49A-204ENST00000451689 MIER1Q8N108 512 aa10.39□□□□□ -0.75
FAM49A-204ENST00000451689 PLCD3Q8N3E9 789 aa10.34□□□□□ -0.75
FAM49A-204ENST00000451689 FARP1Q9Y4F1 1045 aaPredicted RBP10.33□□□□□ -0.76
FAM49A-204ENST00000451689 DCAF1Q9Y4B6 1507 aa10.32□□□□□ -0.76
FAM49A-204ENST00000451689 EVX2Q03828 476 aa10.31□□□□□ -0.76
FAM49A-204ENST00000451689 VASPP50552 380 aaPredicted RBP10.3□□□□□ -0.76
FAM49A-204ENST00000451689 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
FAM49A-204ENST00000451689 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
FAM49A-204ENST00000451689 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
FAM49A-204ENST00000451689 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
FAM49A-204ENST00000451689 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
FAM49A-204ENST00000451689 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
FAM49A-204ENST00000451689 ABCC9O60706 1549 aa10.18□□□□□ -0.78
FAM49A-204ENST00000451689 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
FAM49A-204ENST00000451689 CD44P16070 742 aaKnown RBP10.16□□□□□ -0.78
FAM49A-204ENST00000451689 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
FAM49A-204ENST00000451689 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
FAM49A-204ENST00000451689 TSPYL2Q9H2G4 693 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms