RNA–Protein interactions for RNA: ENST00000451036.5

RFTN1-206, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 4

Gene RFTN1, Length 1,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-206ENST00000451036 CHGAP10645 457 aaKnown RBP24.21■■□□□ 1.47
RFTN1-206ENST00000451036 RIMS2Q9UQ26 1411 aa24.2■■□□□ 1.46
RFTN1-206ENST00000451036 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
RFTN1-206ENST00000451036 BCANQ96GW7 911 aa24.16■■□□□ 1.46
RFTN1-206ENST00000451036 NUTM2DQ5VT03 806 aaPredicted RBP24.15■■□□□ 1.46
RFTN1-206ENST00000451036 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
RFTN1-206ENST00000451036 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.46
RFTN1-206ENST00000451036 HFM1A2PYH4 1435 aa24.14■■□□□ 1.45
RFTN1-206ENST00000451036 PPP1R15AO75807 674 aaPredicted RBP24.14■■□□□ 1.45
RFTN1-206ENST00000451036 HSPA1LP34931 641 aa24.14■■□□□ 1.45
RFTN1-206ENST00000451036 KCNA6P17658 529 aa24.13■■□□□ 1.45
RFTN1-206ENST00000451036 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
RFTN1-206ENST00000451036 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
RFTN1-206ENST00000451036 NWD1Q149M9 1564 aa24.09■■□□□ 1.45
RFTN1-206ENST00000451036 TMEM94Q12767 1356 aa24.09■■□□□ 1.45
RFTN1-206ENST00000451036 RBM33Q96EV2 1170 aaKnown RBP24.09■■□□□ 1.45
RFTN1-206ENST00000451036 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
RFTN1-206ENST00000451036 TRIM52Q96A61 297 aa24.07■■□□□ 1.44
RFTN1-206ENST00000451036 PROSER2Q86WR7 435 aaPredicted RBP24.06■■□□□ 1.44
RFTN1-206ENST00000451036 ADAMTS13Q76LX8 1427 aa24.06■■□□□ 1.44
RFTN1-206ENST00000451036 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
RFTN1-206ENST00000451036 CLTCL1P53675 1640 aa24.04■■□□□ 1.44
RFTN1-206ENST00000451036 TRPM2O94759 1503 aa24.04■■□□□ 1.44
RFTN1-206ENST00000451036 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
RFTN1-206ENST00000451036 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
RFTN1-206ENST00000451036 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
RFTN1-206ENST00000451036 ZNF326Q5BKZ1 582 aaKnown RBP24■■□□□ 1.43
RFTN1-206ENST00000451036 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
RFTN1-206ENST00000451036 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
RFTN1-206ENST00000451036 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.43
RFTN1-206ENST00000451036 SOCS7O14512 581 aa23.95■■□□□ 1.42
RFTN1-206ENST00000451036 FOXD1Q16676 465 aa23.94■■□□□ 1.42
RFTN1-206ENST00000451036 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
RFTN1-206ENST00000451036 PTPRUQ92729 1446 aa23.93■■□□□ 1.42
RFTN1-206ENST00000451036 KIF1BO60333 1816 aa23.93■■□□□ 1.42
RFTN1-206ENST00000451036 MSH6P52701 1360 aa23.92■■□□□ 1.42
RFTN1-206ENST00000451036 PIK3R4Q99570 1358 aa23.92■■□□□ 1.42
RFTN1-206ENST00000451036 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
RFTN1-206ENST00000451036 FAM135BQ49AJ0 1406 aa23.92■■□□□ 1.42
RFTN1-206ENST00000451036 MED1Q15648 1581 aaPredicted RBP23.91■■□□□ 1.42
RFTN1-206ENST00000451036 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
RFTN1-206ENST00000451036 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
RFTN1-206ENST00000451036 METP08581 1390 aa23.87■■□□□ 1.41
RFTN1-206ENST00000451036 NCOA3Q9Y6Q9 1424 aa23.85■■□□□ 1.41
RFTN1-206ENST00000451036 C14orf37Q86TY3 774 aa23.85■■□□□ 1.41
RFTN1-206ENST00000451036 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
RFTN1-206ENST00000451036 XRN1Q8IZH2 1706 aaKnown RBP23.84■■□□□ 1.41
RFTN1-206ENST00000451036 SLAIN2Q9P270 581 aa23.84■■□□□ 1.41
RFTN1-206ENST00000451036 SETD5Q9C0A6 1442 aa23.82■■□□□ 1.4
RFTN1-206ENST00000451036 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.81■■□□□ 1.4
RFTN1-206ENST00000451036 C19orf44Q9H6X5 657 aa23.79■■□□□ 1.4
RFTN1-206ENST00000451036 CCDC144AA2RUR9 1427 aa23.78■■□□□ 1.4
RFTN1-206ENST00000451036 VGFO15240 615 aaPredicted RBP23.78■■□□□ 1.4
RFTN1-206ENST00000451036 RPGRIP1LQ68CZ1 1315 aa23.78■■□□□ 1.4
RFTN1-206ENST00000451036 PPLO60437 1756 aa23.78■■□□□ 1.4
RFTN1-206ENST00000451036 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
RFTN1-206ENST00000451036 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
RFTN1-206ENST00000451036 ATF3P18847 181 aa23.75■■□□□ 1.39
RFTN1-206ENST00000451036 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
RFTN1-206ENST00000451036 SPATA31E1Q6ZUB1 1445 aa23.75■■□□□ 1.39
RFTN1-206ENST00000451036 RGL3Q3MIN7 710 aa23.74■■□□□ 1.39
RFTN1-206ENST00000451036 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
RFTN1-206ENST00000451036 PHLPP1O60346 1717 aa23.72■■□□□ 1.39
RFTN1-206ENST00000451036 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
RFTN1-206ENST00000451036 DCCP43146 1447 aa23.69■■□□□ 1.38
RFTN1-206ENST00000451036 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
RFTN1-206ENST00000451036 ROBO2Q9HCK4 1378 aa23.67■■□□□ 1.38
RFTN1-206ENST00000451036 COL16A1Q07092 1604 aaPredicted RBP23.67■■□□□ 1.38
RFTN1-206ENST00000451036 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
RFTN1-206ENST00000451036 NALCNQ8IZF0 1738 aa23.67■■□□□ 1.38
RFTN1-206ENST00000451036 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
RFTN1-206ENST00000451036 BRINP3Q76B58 766 aa23.66■■□□□ 1.38
RFTN1-206ENST00000451036 IFT172Q9UG01 1749 aa23.66■■□□□ 1.38
RFTN1-206ENST00000451036 MST1RQ04912 1400 aa23.66■■□□□ 1.38
RFTN1-206ENST00000451036 ANKRD30BQ9BXX2 1392 aa23.64■■□□□ 1.37
RFTN1-206ENST00000451036 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
RFTN1-206ENST00000451036 RGS17Q9UGC6 210 aaPredicted RBP23.63■■□□□ 1.37
RFTN1-206ENST00000451036 JCADQ9P266 1359 aa23.63■■□□□ 1.37
RFTN1-206ENST00000451036 PRAG1Q86YV5 1406 aa23.62■■□□□ 1.37
RFTN1-206ENST00000451036 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
RFTN1-206ENST00000451036 PIK3C2GO75747 1445 aa23.59■■□□□ 1.37
RFTN1-206ENST00000451036 TMEM132EQ6IEE7 984 aa23.56■■□□□ 1.36
RFTN1-206ENST00000451036 STK26Q9P289 416 aa23.56■■□□□ 1.36
RFTN1-206ENST00000451036 DDX17Q92841 729 aaKnown RBP23.55■■□□□ 1.36
RFTN1-206ENST00000451036 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
RFTN1-206ENST00000451036 LRP6O75581 1613 aa23.53■■□□□ 1.36
RFTN1-206ENST00000451036 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
RFTN1-206ENST00000451036 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
RFTN1-206ENST00000451036 TECPR2O15040 1411 aa23.52■■□□□ 1.36
RFTN1-206ENST00000451036 NRXN1Q9ULB1 1477 aa23.52■■□□□ 1.36
RFTN1-206ENST00000451036 HRCP23327 699 aa23.52■■□□□ 1.36
RFTN1-206ENST00000451036 MYOM2P54296 1465 aa23.51■■□□□ 1.35
RFTN1-206ENST00000451036 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
RFTN1-206ENST00000451036 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
RFTN1-206ENST00000451036 POTEAQ6S8J7 498 aa23.5■■□□□ 1.35
RFTN1-206ENST00000451036 PLEKHH1Q9ULM0 1364 aa23.5■■□□□ 1.35
RFTN1-206ENST00000451036 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
RFTN1-206ENST00000451036 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
RFTN1-206ENST00000451036 C14orf93Q9H972 538 aaKnown RBP23.49■■□□□ 1.35
RFTN1-206ENST00000451036 SPATA31A6Q5VVP1 1343 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms