RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 SCAF11Q99590 1463 aaKnown RBP24.09■■□□□ 1.45
ALMS1P1-202ENST00000450720 SENP3Q9H4L4 574 aaPredicted RBP24.09■■□□□ 1.45
ALMS1P1-202ENST00000450720 HDGFP51858 240 aaKnown RBP24.08■■□□□ 1.45
ALMS1P1-202ENST00000450720 DMRT2Q9Y5R5 561 aa24.07■■□□□ 1.44
ALMS1P1-202ENST00000450720 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
ALMS1P1-202ENST00000450720 BCANQ96GW7 911 aa24.06■■□□□ 1.44
ALMS1P1-202ENST00000450720 ZFYVE9O95405 1425 aa24.05■■□□□ 1.44
ALMS1P1-202ENST00000450720 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.05■■□□□ 1.44
ALMS1P1-202ENST00000450720 NPHP4O75161 1426 aaPredicted RBP24.04■■□□□ 1.44
ALMS1P1-202ENST00000450720 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
ALMS1P1-202ENST00000450720 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
ALMS1P1-202ENST00000450720 SIN3AQ96ST3 1273 aa24.01■■□□□ 1.43
ALMS1P1-202ENST00000450720 NEUROD1Q13562 356 aa24■■□□□ 1.43
ALMS1P1-202ENST00000450720 MED14O60244 1454 aa24■■□□□ 1.43
ALMS1P1-202ENST00000450720 RPGRIP1LQ68CZ1 1315 aa23.99■■□□□ 1.43
ALMS1P1-202ENST00000450720 NEXMIFQ5QGS0 1516 aa23.99■■□□□ 1.43
ALMS1P1-202ENST00000450720 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
ALMS1P1-202ENST00000450720 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
ALMS1P1-202ENST00000450720 PLEKHG1Q9ULL1 1385 aa23.96■■□□□ 1.43
ALMS1P1-202ENST00000450720 CCER1Q8TC90 406 aaPredicted RBP23.95■■□□□ 1.43
ALMS1P1-202ENST00000450720 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
ALMS1P1-202ENST00000450720 DCAF11Q8TEB1 546 aa23.92■■□□□ 1.42
ALMS1P1-202ENST00000450720 PPLO60437 1756 aa23.91■■□□□ 1.42
ALMS1P1-202ENST00000450720 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
ALMS1P1-202ENST00000450720 ADGRF5Q8IZF2 1346 aa23.9■■□□□ 1.42
ALMS1P1-202ENST00000450720 ZNF335Q9H4Z2 1342 aaPredicted RBP23.87■■□□□ 1.41
ALMS1P1-202ENST00000450720 IFT172Q9UG01 1749 aa23.86■■□□□ 1.41
ALMS1P1-202ENST00000450720 ADAMTS13Q76LX8 1427 aa23.85■■□□□ 1.41
ALMS1P1-202ENST00000450720 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
ALMS1P1-202ENST00000450720 L3MBTL2Q969R5 705 aa23.83■■□□□ 1.41
ALMS1P1-202ENST00000450720 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
ALMS1P1-202ENST00000450720 MYOM2P54296 1465 aa23.83■■□□□ 1.4
ALMS1P1-202ENST00000450720 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
ALMS1P1-202ENST00000450720 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
ALMS1P1-202ENST00000450720 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
ALMS1P1-202ENST00000450720 DIP2AQ14689 1571 aa23.81■■□□□ 1.4
ALMS1P1-202ENST00000450720 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
ALMS1P1-202ENST00000450720 STAC3Q96MF2 364 aa23.78■■□□□ 1.4
ALMS1P1-202ENST00000450720 METP08581 1390 aa23.77■■□□□ 1.4
ALMS1P1-202ENST00000450720 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
ALMS1P1-202ENST00000450720 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.39
ALMS1P1-202ENST00000450720 KCNA6P17658 529 aa23.75■■□□□ 1.39
ALMS1P1-202ENST00000450720 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
ALMS1P1-202ENST00000450720 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
ALMS1P1-202ENST00000450720 PIK3R4Q99570 1358 aa23.73■■□□□ 1.39
ALMS1P1-202ENST00000450720 C14orf93Q9H972 538 aaKnown RBP23.72■■□□□ 1.39
ALMS1P1-202ENST00000450720 AMOTL2Q9Y2J4 779 aa23.72■■□□□ 1.39
ALMS1P1-202ENST00000450720 TMEM132EQ6IEE7 984 aa23.71■■□□□ 1.39
ALMS1P1-202ENST00000450720 PTPRUQ92729 1446 aa23.7■■□□□ 1.38
ALMS1P1-202ENST00000450720 STRCP1A6NGW2 1772 aa23.7■■□□□ 1.38
ALMS1P1-202ENST00000450720 CPS1P31327 1500 aa23.69■■□□□ 1.38
ALMS1P1-202ENST00000450720 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
ALMS1P1-202ENST00000450720 SETD1AO15047 1707 aaKnown RBP23.68■■□□□ 1.38
ALMS1P1-202ENST00000450720 STK26Q9P289 416 aa23.68■■□□□ 1.38
ALMS1P1-202ENST00000450720 NWD1Q149M9 1564 aa23.67■■□□□ 1.38
ALMS1P1-202ENST00000450720 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
ALMS1P1-202ENST00000450720 LAMC1P11047 1609 aa23.67■■□□□ 1.38
ALMS1P1-202ENST00000450720 CHD2O14647 1828 aaKnown RBP23.67■■□□□ 1.38
ALMS1P1-202ENST00000450720 CERKQ8TCT0 537 aa23.66■■□□□ 1.38
ALMS1P1-202ENST00000450720 RBM33Q96EV2 1170 aaKnown RBP23.66■■□□□ 1.38
ALMS1P1-202ENST00000450720 NKTRP30414 1462 aaKnown RBP23.65■■□□□ 1.38
ALMS1P1-202ENST00000450720 ASXL1Q8IXJ9 1541 aa23.64■■□□□ 1.38
ALMS1P1-202ENST00000450720 LRRC7Q96NW7 1537 aa23.64■■□□□ 1.37
ALMS1P1-202ENST00000450720 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
ALMS1P1-202ENST00000450720 XRN1Q8IZH2 1706 aaKnown RBP23.61■■□□□ 1.37
ALMS1P1-202ENST00000450720 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
ALMS1P1-202ENST00000450720 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
ALMS1P1-202ENST00000450720 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
ALMS1P1-202ENST00000450720 LRPPRCP42704 1394 aaKnown RBP23.6■■□□□ 1.37
ALMS1P1-202ENST00000450720 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
ALMS1P1-202ENST00000450720 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
ALMS1P1-202ENST00000450720 ROBO2Q9HCK4 1378 aa23.58■■□□□ 1.37
ALMS1P1-202ENST00000450720 ADGRB1O14514 1584 aa23.58■■□□□ 1.36
ALMS1P1-202ENST00000450720 TRAK1Q9UPV9 953 aa23.57■■□□□ 1.36
ALMS1P1-202ENST00000450720 PTCH1Q13635 1447 aa23.56■■□□□ 1.36
ALMS1P1-202ENST00000450720 ROCK2O75116 1388 aaKnown RBP23.56■■□□□ 1.36
ALMS1P1-202ENST00000450720 ABCC11Q96J66 1382 aa23.56■■□□□ 1.36
ALMS1P1-202ENST00000450720 KIAA1210Q9ULL0 1709 aa23.55■■□□□ 1.36
ALMS1P1-202ENST00000450720 TRPM1Q7Z4N2 1603 aa23.54■■□□□ 1.36
ALMS1P1-202ENST00000450720 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
ALMS1P1-202ENST00000450720 TECPR2O15040 1411 aa23.52■■□□□ 1.36
ALMS1P1-202ENST00000450720 IQSEC2Q5JU85 1478 aa23.51■■□□□ 1.35
ALMS1P1-202ENST00000450720 MSH6P52701 1360 aa23.51■■□□□ 1.35
ALMS1P1-202ENST00000450720 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
ALMS1P1-202ENST00000450720 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
ALMS1P1-202ENST00000450720 POGKQ9P215 609 aa23.51■■□□□ 1.35
ALMS1P1-202ENST00000450720 KNDC1Q76NI1 1749 aa23.5■■□□□ 1.35
ALMS1P1-202ENST00000450720 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
ALMS1P1-202ENST00000450720 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
ALMS1P1-202ENST00000450720 UBAP1LF5GYI3 381 aa23.48■■□□□ 1.35
ALMS1P1-202ENST00000450720 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
ALMS1P1-202ENST00000450720 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
ALMS1P1-202ENST00000450720 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
ALMS1P1-202ENST00000450720 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
ALMS1P1-202ENST00000450720 C19orf44Q9H6X5 657 aa23.47■■□□□ 1.35
ALMS1P1-202ENST00000450720 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
ALMS1P1-202ENST00000450720 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
ALMS1P1-202ENST00000450720 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
ALMS1P1-202ENST00000450720 ATF3P18847 181 aa23.44■■□□□ 1.34
ALMS1P1-202ENST00000450720 TOM1O60784 492 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms