RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SLC26A8Q96RN1 970 aa18.79■□□□□ 0.6
MSH5-209ENST00000450148 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
MSH5-209ENST00000450148 CHD2O14647 1828 aaKnown RBP18.79■□□□□ 0.6
MSH5-209ENST00000450148 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
MSH5-209ENST00000450148 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
MSH5-209ENST00000450148 KCNA6P17658 529 aa18.77■□□□□ 0.6
MSH5-209ENST00000450148 HSPA1LP34931 641 aa18.76■□□□□ 0.59
MSH5-209ENST00000450148 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
MSH5-209ENST00000450148 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
MSH5-209ENST00000450148 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
MSH5-209ENST00000450148 NKTRP30414 1462 aaKnown RBP18.73■□□□□ 0.59
MSH5-209ENST00000450148 DISP3Q9P2K9 1392 aa18.73■□□□□ 0.59
MSH5-209ENST00000450148 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
MSH5-209ENST00000450148 TMEM94Q12767 1356 aa18.72■□□□□ 0.59
MSH5-209ENST00000450148 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
MSH5-209ENST00000450148 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
MSH5-209ENST00000450148 TRPM2O94759 1503 aa18.72■□□□□ 0.59
MSH5-209ENST00000450148 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
MSH5-209ENST00000450148 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.58
MSH5-209ENST00000450148 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
MSH5-209ENST00000450148 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
MSH5-209ENST00000450148 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
MSH5-209ENST00000450148 TBX22Q9Y458 520 aa18.7■□□□□ 0.58
MSH5-209ENST00000450148 KIF1BO60333 1816 aa18.69■□□□□ 0.58
MSH5-209ENST00000450148 PROSER2Q86WR7 435 aaPredicted RBP18.68■□□□□ 0.58
MSH5-209ENST00000450148 BCANQ96GW7 911 aa18.68■□□□□ 0.58
MSH5-209ENST00000450148 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
MSH5-209ENST00000450148 RBM33Q96EV2 1170 aaKnown RBP18.67■□□□□ 0.58
MSH5-209ENST00000450148 SETBP1Q9Y6X0 1596 aa18.66■□□□□ 0.58
MSH5-209ENST00000450148 NEXMIFQ5QGS0 1516 aa18.65■□□□□ 0.58
MSH5-209ENST00000450148 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
MSH5-209ENST00000450148 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
MSH5-209ENST00000450148 MED1Q15648 1581 aaPredicted RBP18.64■□□□□ 0.57
MSH5-209ENST00000450148 FAM135BQ49AJ0 1406 aa18.63■□□□□ 0.57
MSH5-209ENST00000450148 PTPRUQ92729 1446 aa18.63■□□□□ 0.57
MSH5-209ENST00000450148 XRN1Q8IZH2 1706 aaKnown RBP18.61■□□□□ 0.57
MSH5-209ENST00000450148 ROBO1Q9Y6N7 1651 aa18.61■□□□□ 0.57
MSH5-209ENST00000450148 NCOA3Q9Y6Q9 1424 aa18.6■□□□□ 0.57
MSH5-209ENST00000450148 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
MSH5-209ENST00000450148 MSH6P52701 1360 aa18.58■□□□□ 0.57
MSH5-209ENST00000450148 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
MSH5-209ENST00000450148 ZNF326Q5BKZ1 582 aaKnown RBP18.58■□□□□ 0.56
MSH5-209ENST00000450148 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
MSH5-209ENST00000450148 PPLO60437 1756 aa18.57■□□□□ 0.56
MSH5-209ENST00000450148 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
MSH5-209ENST00000450148 METP08581 1390 aa18.55■□□□□ 0.56
MSH5-209ENST00000450148 FOXD1Q16676 465 aa18.55■□□□□ 0.56
MSH5-209ENST00000450148 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
MSH5-209ENST00000450148 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
MSH5-209ENST00000450148 RPGRIP1LQ68CZ1 1315 aa18.5■□□□□ 0.55
MSH5-209ENST00000450148 SETD5Q9C0A6 1442 aa18.5■□□□□ 0.55
MSH5-209ENST00000450148 IFT172Q9UG01 1749 aa18.5■□□□□ 0.55
MSH5-209ENST00000450148 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
MSH5-209ENST00000450148 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
MSH5-209ENST00000450148 SPATA31E1Q6ZUB1 1445 aa18.49■□□□□ 0.55
MSH5-209ENST00000450148 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
MSH5-209ENST00000450148 SOCS7O14512 581 aa18.47■□□□□ 0.55
MSH5-209ENST00000450148 COL16A1Q07092 1604 aaPredicted RBP18.47■□□□□ 0.55
MSH5-209ENST00000450148 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
MSH5-209ENST00000450148 DCCP43146 1447 aa18.47■□□□□ 0.55
MSH5-209ENST00000450148 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
MSH5-209ENST00000450148 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
MSH5-209ENST00000450148 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
MSH5-209ENST00000450148 PRAG1Q86YV5 1406 aa18.45■□□□□ 0.54
MSH5-209ENST00000450148 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
MSH5-209ENST00000450148 AHDC1Q5TGY3 1603 aaPredicted RBP18.44■□□□□ 0.54
MSH5-209ENST00000450148 ADGRL3Q9HAR2 1447 aa18.43■□□□□ 0.54
MSH5-209ENST00000450148 ATF3P18847 181 aa18.43■□□□□ 0.54
MSH5-209ENST00000450148 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
MSH5-209ENST00000450148 MST1RQ04912 1400 aa18.42■□□□□ 0.54
MSH5-209ENST00000450148 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
MSH5-209ENST00000450148 RGS17Q9UGC6 210 aaPredicted RBP18.41■□□□□ 0.54
MSH5-209ENST00000450148 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
MSH5-209ENST00000450148 ROBO2Q9HCK4 1378 aa18.41■□□□□ 0.54
MSH5-209ENST00000450148 RGL3Q3MIN7 710 aa18.39■□□□□ 0.53
MSH5-209ENST00000450148 BRINP3Q76B58 766 aa18.39■□□□□ 0.53
MSH5-209ENST00000450148 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
MSH5-209ENST00000450148 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
MSH5-209ENST00000450148 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
MSH5-209ENST00000450148 JCADQ9P266 1359 aa18.38■□□□□ 0.53
MSH5-209ENST00000450148 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
MSH5-209ENST00000450148 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
MSH5-209ENST00000450148 SHPRHQ149N8 1683 aa18.36■□□□□ 0.53
MSH5-209ENST00000450148 KNDC1Q76NI1 1749 aa18.34■□□□□ 0.53
MSH5-209ENST00000450148 NRXN1Q9ULB1 1477 aa18.33■□□□□ 0.53
MSH5-209ENST00000450148 TECPR2O15040 1411 aa18.33■□□□□ 0.53
MSH5-209ENST00000450148 LRP6O75581 1613 aa18.32■□□□□ 0.52
MSH5-209ENST00000450148 LAMC1P11047 1609 aa18.32■□□□□ 0.52
MSH5-209ENST00000450148 HRCP23327 699 aa18.32■□□□□ 0.52
MSH5-209ENST00000450148 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
MSH5-209ENST00000450148 MYOM2P54296 1465 aa18.31■□□□□ 0.52
MSH5-209ENST00000450148 LRPPRCP42704 1394 aaKnown RBP18.3■□□□□ 0.52
MSH5-209ENST00000450148 CDC42BPGQ6DT37 1551 aa18.29■□□□□ 0.52
MSH5-209ENST00000450148 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
MSH5-209ENST00000450148 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
MSH5-209ENST00000450148 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
MSH5-209ENST00000450148 POTEAQ6S8J7 498 aa18.28■□□□□ 0.52
MSH5-209ENST00000450148 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
MSH5-209ENST00000450148 YTHDC2Q9H6S0 1430 aaKnown RBP18.26■□□□□ 0.51
MSH5-209ENST00000450148 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms