RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ROCK2O75116 1388 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-203ENST00000448935 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
VIPAS39-203ENST00000448935 REREQ9P2R6 1566 aa14.72□□□□□ -0.05
VIPAS39-203ENST00000448935 ABCC3O15438 1527 aa14.71□□□□□ -0.05
VIPAS39-203ENST00000448935 GGT6Q6P531 493 aa14.71□□□□□ -0.05
VIPAS39-203ENST00000448935 CAMSAP1Q5T5Y3 1602 aa14.71□□□□□ -0.06
VIPAS39-203ENST00000448935 GPRASP1Q5JY77 1395 aa14.7□□□□□ -0.06
VIPAS39-203ENST00000448935 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-203ENST00000448935 CNTLNQ9NXG0 1405 aa14.7□□□□□ -0.06
VIPAS39-203ENST00000448935 WASHC2CQ9Y4E1 1318 aa14.7□□□□□ -0.06
VIPAS39-203ENST00000448935 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
VIPAS39-203ENST00000448935 YEATS2Q9ULM3 1422 aa14.69□□□□□ -0.06
VIPAS39-203ENST00000448935 MADDQ8WXG6 1647 aa14.68□□□□□ -0.06
VIPAS39-203ENST00000448935 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
VIPAS39-203ENST00000448935 NPATQ14207 1427 aa14.67□□□□□ -0.06
VIPAS39-203ENST00000448935 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
VIPAS39-203ENST00000448935 AGLP35573 1532 aa14.67□□□□□ -0.06
VIPAS39-203ENST00000448935 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
VIPAS39-203ENST00000448935 KIF7Q2M1P5 1343 aa14.66□□□□□ -0.06
VIPAS39-203ENST00000448935 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
VIPAS39-203ENST00000448935 MYOM2P54296 1465 aa14.65□□□□□ -0.06
VIPAS39-203ENST00000448935 IFT172Q9UG01 1749 aa14.64□□□□□ -0.07
VIPAS39-203ENST00000448935 C11orf95C9JLR9 678 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-203ENST00000448935 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
VIPAS39-203ENST00000448935 ADGRB3O60242 1522 aa14.63□□□□□ -0.07
VIPAS39-203ENST00000448935 NOS1P29475 1434 aa14.62□□□□□ -0.07
VIPAS39-203ENST00000448935 ST20-MTHFSA0A0A6YYL1 179 aa14.62□□□□□ -0.07
VIPAS39-203ENST00000448935 ARHGEF40Q8TER5 1519 aa14.62□□□□□ -0.07
VIPAS39-203ENST00000448935 UGGT1Q9NYU2 1555 aa14.62□□□□□ -0.07
VIPAS39-203ENST00000448935 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-203ENST00000448935 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
VIPAS39-203ENST00000448935 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
VIPAS39-203ENST00000448935 RPGRIP1LQ68CZ1 1315 aa14.6□□□□□ -0.07
VIPAS39-203ENST00000448935 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
VIPAS39-203ENST00000448935 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
VIPAS39-203ENST00000448935 SIGLEC1Q9BZZ2 1709 aa14.59□□□□□ -0.07
VIPAS39-203ENST00000448935 PPLO60437 1756 aa14.58□□□□□ -0.08
VIPAS39-203ENST00000448935 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
VIPAS39-203ENST00000448935 SYNMO15061 1565 aa14.57□□□□□ -0.08
VIPAS39-203ENST00000448935 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
VIPAS39-203ENST00000448935 NRXN1Q9ULB1 1477 aa14.57□□□□□ -0.08
VIPAS39-203ENST00000448935 EIF3AQ14152 1382 aaKnown RBP14.57□□□□□ -0.08
VIPAS39-203ENST00000448935 SCAF11Q99590 1463 aaKnown RBP14.56□□□□□ -0.08
VIPAS39-203ENST00000448935 COL17A1Q9UMD9 1497 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-203ENST00000448935 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-203ENST00000448935 BCANQ96GW7 911 aa14.55□□□□□ -0.08
VIPAS39-203ENST00000448935 TMF1P82094 1093 aa14.54□□□□□ -0.08
VIPAS39-203ENST00000448935 POLR3GLQ9BT43 218 aa14.54□□□□□ -0.08
VIPAS39-203ENST00000448935 SETBP1Q9Y6X0 1596 aa14.53□□□□□ -0.08
VIPAS39-203ENST00000448935 CLTCQ00610 1675 aaKnown RBP14.53□□□□□ -0.08
VIPAS39-203ENST00000448935 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.08
VIPAS39-203ENST00000448935 CDCA8Q53HL2 280 aa14.52□□□□□ -0.09
VIPAS39-203ENST00000448935 TESK2Q96S53 571 aa14.51□□□□□ -0.09
VIPAS39-203ENST00000448935 ADGRF5Q8IZF2 1346 aa14.5□□□□□ -0.09
VIPAS39-203ENST00000448935 ERVK-7P63135 1459 aa14.5□□□□□ -0.09
VIPAS39-203ENST00000448935 KTN1Q86UP2 1357 aaKnown RBP14.5□□□□□ -0.09
VIPAS39-203ENST00000448935 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
VIPAS39-203ENST00000448935 PIK3C2GO75747 1445 aa14.5□□□□□ -0.09
VIPAS39-203ENST00000448935 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 ESF1Q9H501 851 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 TMEM131LA2VDJ0 1609 aa14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 IDI1Q13907 227 aa14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 SPATA31D1Q6ZQQ2 1576 aa14.48□□□□□ -0.09
VIPAS39-203ENST00000448935 MYO3AQ8NEV4 1616 aa14.47□□□□□ -0.09
VIPAS39-203ENST00000448935 CFAP70Q5T0N1 1121 aa14.47□□□□□ -0.09
VIPAS39-203ENST00000448935 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
VIPAS39-203ENST00000448935 C14orf93Q9H972 538 aaKnown RBP14.46□□□□□ -0.09
VIPAS39-203ENST00000448935 DISP3Q9P2K9 1392 aa14.46□□□□□ -0.1
VIPAS39-203ENST00000448935 MYO5BQ9ULV0 1848 aa14.45□□□□□ -0.1
VIPAS39-203ENST00000448935 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
VIPAS39-203ENST00000448935 SBNO2Q9Y2G9 1366 aa14.43□□□□□ -0.1
VIPAS39-203ENST00000448935 POLA2Q14181 598 aa14.43□□□□□ -0.1
VIPAS39-203ENST00000448935 MLECQ14165 292 aa14.42□□□□□ -0.1
VIPAS39-203ENST00000448935 RALBP1Q15311 655 aa14.42□□□□□ -0.1
VIPAS39-203ENST00000448935 ADGRB1O14514 1584 aa14.42□□□□□ -0.1
VIPAS39-203ENST00000448935 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
VIPAS39-203ENST00000448935 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-203ENST00000448935 MRS2Q9HD23 443 aa14.41□□□□□ -0.1
VIPAS39-203ENST00000448935 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
VIPAS39-203ENST00000448935 CENPJQ9HC77 1338 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-203ENST00000448935 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
VIPAS39-203ENST00000448935 QRICH2Q9H0J4 1663 aa14.38□□□□□ -0.11
VIPAS39-203ENST00000448935 MYBBP1AQ9BQG0 1328 aaKnown RBP14.37□□□□□ -0.11
VIPAS39-203ENST00000448935 PER1O15534 1290 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-203ENST00000448935 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
VIPAS39-203ENST00000448935 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
VIPAS39-203ENST00000448935 PANK3Q9H999 370 aa14.36□□□□□ -0.11
VIPAS39-203ENST00000448935 BRD4O60885 1362 aaPredicted RBP14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 MYOM1P52179 1685 aa14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 HDGFP51858 240 aaKnown RBP14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 TAOK2Q9UL54 1235 aa14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
VIPAS39-203ENST00000448935 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-203ENST00000448935 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.11
VIPAS39-203ENST00000448935 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
VIPAS39-203ENST00000448935 TRAK1Q9UPV9 953 aa14.34□□□□□ -0.11
VIPAS39-203ENST00000448935 TNRQ92752 1358 aa14.34□□□□□ -0.11
VIPAS39-203ENST00000448935 PUS7Q96PZ0 661 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms