RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CFAP65Q6ZU64 1925 aaKnown RBP17.01■□□□□ 0.31
LINC00408-201ENST00000447784 HDGFP51858 240 aaKnown RBP16.99■□□□□ 0.31
LINC00408-201ENST00000447784 E9PCH4 1651 aa16.99■□□□□ 0.31
LINC00408-201ENST00000447784 CPS1P31327 1500 aa16.99■□□□□ 0.31
LINC00408-201ENST00000447784 IQGAP1P46940 1657 aa16.98■□□□□ 0.31
LINC00408-201ENST00000447784 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.95■□□□□ 0.3
LINC00408-201ENST00000447784 ZFYVE9O95405 1425 aa16.95■□□□□ 0.3
LINC00408-201ENST00000447784 CHGAP10645 457 aaKnown RBP16.94■□□□□ 0.3
LINC00408-201ENST00000447784 TMEM131LA2VDJ0 1609 aa16.94■□□□□ 0.3
LINC00408-201ENST00000447784 RIMS2Q9UQ26 1411 aa16.93■□□□□ 0.3
LINC00408-201ENST00000447784 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
LINC00408-201ENST00000447784 UBAP1LF5GYI3 381 aa16.9■□□□□ 0.3
LINC00408-201ENST00000447784 PPP1R15AO75807 674 aaPredicted RBP16.9■□□□□ 0.3
LINC00408-201ENST00000447784 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
LINC00408-201ENST00000447784 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
LINC00408-201ENST00000447784 TRPM2O94759 1503 aa16.88■□□□□ 0.29
LINC00408-201ENST00000447784 KCNA6P17658 529 aa16.88■□□□□ 0.29
LINC00408-201ENST00000447784 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
LINC00408-201ENST00000447784 LRRC7Q96NW7 1537 aa16.87■□□□□ 0.29
LINC00408-201ENST00000447784 TOM1O60784 492 aa16.87■□□□□ 0.29
LINC00408-201ENST00000447784 BCANQ96GW7 911 aa16.87■□□□□ 0.29
LINC00408-201ENST00000447784 TBX22Q9Y458 520 aa16.87■□□□□ 0.29
LINC00408-201ENST00000447784 SPHKAPQ2M3C7 1700 aa16.86■□□□□ 0.29
LINC00408-201ENST00000447784 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
LINC00408-201ENST00000447784 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
LINC00408-201ENST00000447784 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
LINC00408-201ENST00000447784 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
LINC00408-201ENST00000447784 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
LINC00408-201ENST00000447784 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
LINC00408-201ENST00000447784 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
LINC00408-201ENST00000447784 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
LINC00408-201ENST00000447784 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
LINC00408-201ENST00000447784 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
LINC00408-201ENST00000447784 MYO5BQ9ULV0 1848 aa16.8■□□□□ 0.28
LINC00408-201ENST00000447784 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
LINC00408-201ENST00000447784 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
LINC00408-201ENST00000447784 NWD1Q149M9 1564 aa16.79■□□□□ 0.28
LINC00408-201ENST00000447784 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
LINC00408-201ENST00000447784 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
LINC00408-201ENST00000447784 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
LINC00408-201ENST00000447784 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
LINC00408-201ENST00000447784 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
LINC00408-201ENST00000447784 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
LINC00408-201ENST00000447784 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
LINC00408-201ENST00000447784 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
LINC00408-201ENST00000447784 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
LINC00408-201ENST00000447784 SETBP1Q9Y6X0 1596 aa16.75■□□□□ 0.27
LINC00408-201ENST00000447784 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
LINC00408-201ENST00000447784 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
LINC00408-201ENST00000447784 AMOTL2Q9Y2J4 779 aa16.72■□□□□ 0.27
LINC00408-201ENST00000447784 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
LINC00408-201ENST00000447784 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
LINC00408-201ENST00000447784 MSH6P52701 1360 aa16.7■□□□□ 0.26
LINC00408-201ENST00000447784 RBM33Q96EV2 1170 aaKnown RBP16.7■□□□□ 0.26
LINC00408-201ENST00000447784 KIF1BO60333 1816 aa16.7■□□□□ 0.26
LINC00408-201ENST00000447784 METP08581 1390 aa16.69■□□□□ 0.26
LINC00408-201ENST00000447784 CHD2O14647 1828 aaKnown RBP16.69■□□□□ 0.26
LINC00408-201ENST00000447784 HSPA1LP34931 641 aa16.69■□□□□ 0.26
LINC00408-201ENST00000447784 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
LINC00408-201ENST00000447784 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
LINC00408-201ENST00000447784 FAM135BQ49AJ0 1406 aa16.68■□□□□ 0.26
LINC00408-201ENST00000447784 DCAF11Q8TEB1 546 aa16.67■□□□□ 0.26
LINC00408-201ENST00000447784 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
LINC00408-201ENST00000447784 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
LINC00408-201ENST00000447784 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
LINC00408-201ENST00000447784 KDM2AQ9Y2K7 1162 aa16.66■□□□□ 0.26
LINC00408-201ENST00000447784 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
LINC00408-201ENST00000447784 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
LINC00408-201ENST00000447784 C14orf37Q86TY3 774 aa16.63■□□□□ 0.25
LINC00408-201ENST00000447784 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
LINC00408-201ENST00000447784 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
LINC00408-201ENST00000447784 ADGRF5Q8IZF2 1346 aa16.63■□□□□ 0.25
LINC00408-201ENST00000447784 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
LINC00408-201ENST00000447784 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
LINC00408-201ENST00000447784 DCCP43146 1447 aa16.61■□□□□ 0.25
LINC00408-201ENST00000447784 PPLO60437 1756 aa16.6■□□□□ 0.25
LINC00408-201ENST00000447784 ATF3P18847 181 aa16.6■□□□□ 0.25
LINC00408-201ENST00000447784 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
LINC00408-201ENST00000447784 PIK3C2GO75747 1445 aa16.58■□□□□ 0.24
LINC00408-201ENST00000447784 MYOM2P54296 1465 aa16.56■□□□□ 0.24
LINC00408-201ENST00000447784 DISP3Q9P2K9 1392 aa16.56■□□□□ 0.24
LINC00408-201ENST00000447784 NRXN1Q9ULB1 1477 aa16.55■□□□□ 0.24
LINC00408-201ENST00000447784 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
LINC00408-201ENST00000447784 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
LINC00408-201ENST00000447784 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
LINC00408-201ENST00000447784 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
LINC00408-201ENST00000447784 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.53■□□□□ 0.24
LINC00408-201ENST00000447784 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
LINC00408-201ENST00000447784 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
LINC00408-201ENST00000447784 ABCC11Q96J66 1382 aa16.53■□□□□ 0.24
LINC00408-201ENST00000447784 SOCS7O14512 581 aa16.53■□□□□ 0.24
LINC00408-201ENST00000447784 TECPR2O15040 1411 aa16.53■□□□□ 0.24
LINC00408-201ENST00000447784 ROBO1Q9Y6N7 1651 aa16.53■□□□□ 0.24
LINC00408-201ENST00000447784 CFAP70Q5T0N1 1121 aa16.51■□□□□ 0.23
LINC00408-201ENST00000447784 ILDR2Q71H61 639 aa16.51■□□□□ 0.23
LINC00408-201ENST00000447784 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
LINC00408-201ENST00000447784 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
LINC00408-201ENST00000447784 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
LINC00408-201ENST00000447784 MST1RQ04912 1400 aa16.5■□□□□ 0.23
LINC00408-201ENST00000447784 STK26Q9P289 416 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms