RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
PRDM15-206ENST00000447016 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
PRDM15-206ENST00000447016 CCDC39Q9UFE4 941 aa16.26■□□□□ 0.19
PRDM15-206ENST00000447016 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
PRDM15-206ENST00000447016 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
PRDM15-206ENST00000447016 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
PRDM15-206ENST00000447016 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
PRDM15-206ENST00000447016 MROH2BQ7Z745 1585 aa16.24■□□□□ 0.19
PRDM15-206ENST00000447016 MCTP1Q6DN14 999 aa16.24■□□□□ 0.19
PRDM15-206ENST00000447016 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
PRDM15-206ENST00000447016 FHOD3Q2V2M9 1422 aa16.23■□□□□ 0.19
PRDM15-206ENST00000447016 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
PRDM15-206ENST00000447016 TRIM29Q14134 588 aa16.23■□□□□ 0.19
PRDM15-206ENST00000447016 SASS6Q6UVJ0 657 aa16.23■□□□□ 0.19
PRDM15-206ENST00000447016 FOXD4L6Q3SYB3 417 aaPredicted RBP16.23■□□□□ 0.19
PRDM15-206ENST00000447016 FOXD4L3Q6VB84 417 aaPredicted RBP16.23■□□□□ 0.19
PRDM15-206ENST00000447016 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.193e-8■■■■■ 32
PRDM15-206ENST00000447016 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
PRDM15-206ENST00000447016 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
PRDM15-206ENST00000447016 SMC3Q9UQE7 1217 aa16.22■□□□□ 0.19
PRDM15-206ENST00000447016 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
PRDM15-206ENST00000447016 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
PRDM15-206ENST00000447016 NASPP49321 788 aaPredicted RBP16.21■□□□□ 0.19
PRDM15-206ENST00000447016 CDR1P51861 262 aa16.21■□□□□ 0.19
PRDM15-206ENST00000447016 MNS1Q8NEH6 495 aa16.21■□□□□ 0.19
PRDM15-206ENST00000447016 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.2■□□□□ 0.18
PRDM15-206ENST00000447016 COG3Q96JB2 828 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 MBD3O95983 291 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 CCDC73Q6ZRK6 1079 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 CPLX1O14810 134 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 NEXNQ0ZGT2 675 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
PRDM15-206ENST00000447016 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 HMGN5P82970 282 aaKnown RBP16.19■□□□□ 0.18
PRDM15-206ENST00000447016 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 LETM1O95202 739 aaPredicted RBP16.19■□□□□ 0.18
PRDM15-206ENST00000447016 HSP90B2PQ58FF3 399 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
PRDM15-206ENST00000447016 CNTLNQ9NXG0 1405 aa16.18■□□□□ 0.18
PRDM15-206ENST00000447016 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
PRDM15-206ENST00000447016 AK7Q96M32 723 aa16.18■□□□□ 0.18
PRDM15-206ENST00000447016 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PRDM15-206ENST00000447016 CDC45O75419 566 aa16.17■□□□□ 0.18
PRDM15-206ENST00000447016 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
PRDM15-206ENST00000447016 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
PRDM15-206ENST00000447016 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
PRDM15-206ENST00000447016 CCDC66A2RUB6 948 aa16.17■□□□□ 0.18
PRDM15-206ENST00000447016 R3HCC1Q9Y3T6 440 aaKnown RBP16.17■□□□□ 0.18
PRDM15-206ENST00000447016 VPS37CA5D8V6 355 aaPredicted RBP16.16■□□□□ 0.18
PRDM15-206ENST00000447016 TRAK2O60296 914 aa16.16■□□□□ 0.18
PRDM15-206ENST00000447016 NAT10Q9H0A0 1025 aaKnown RBP16.16■□□□□ 0.18
PRDM15-206ENST00000447016 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
PRDM15-206ENST00000447016 PDE4CQ08493 712 aa16.16■□□□□ 0.18
PRDM15-206ENST00000447016 CWC15Q9P013 229 aaKnown RBP16.16■□□□□ 0.18
PRDM15-206ENST00000447016 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
PRDM15-206ENST00000447016 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
PRDM15-206ENST00000447016 TEFQ10587 303 aa16.15■□□□□ 0.18
PRDM15-206ENST00000447016 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
PRDM15-206ENST00000447016 ERC2O15083 957 aa16.15■□□□□ 0.18
PRDM15-206ENST00000447016 GNAI1P63096 354 aa16.15■□□□□ 0.18
PRDM15-206ENST00000447016 TRDNQ13061 729 aa16.15■□□□□ 0.18
PRDM15-206ENST00000447016 MCM2P49736 904 aa16.14■□□□□ 0.17
PRDM15-206ENST00000447016 PCMTD1Q96MG8 357 aaPredicted RBP16.14■□□□□ 0.17
PRDM15-206ENST00000447016 RIPK4P57078 832 aa16.14■□□□□ 0.17
PRDM15-206ENST00000447016 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
PRDM15-206ENST00000447016 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
PRDM15-206ENST00000447016 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
PRDM15-206ENST00000447016 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.14■□□□□ 0.17
PRDM15-206ENST00000447016 MIA2Q96PC5 1412 aa16.13■□□□□ 0.17
PRDM15-206ENST00000447016 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
PRDM15-206ENST00000447016 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
PRDM15-206ENST00000447016 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
PRDM15-206ENST00000447016 LTV1Q96GA3 475 aaPredicted RBP16.12■□□□□ 0.17
PRDM15-206ENST00000447016 DHX8Q14562 1220 aaKnown RBP16.12■□□□□ 0.17
PRDM15-206ENST00000447016 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.17
PRDM15-206ENST00000447016 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
PRDM15-206ENST00000447016 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
PRDM15-206ENST00000447016 CCP110O43303 1012 aa16.11■□□□□ 0.17
PRDM15-206ENST00000447016 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRDM15-206ENST00000447016 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
PRDM15-206ENST00000447016 G3V3G9 751 aa16.09■□□□□ 0.17
PRDM15-206ENST00000447016 DCAF8Q5TAQ9 597 aa16.09■□□□□ 0.17
PRDM15-206ENST00000447016 RABEP1Q15276 862 aa16.09■□□□□ 0.17
PRDM15-206ENST00000447016 PRM3Q9NNZ6 103 aa16.09■□□□□ 0.17
PRDM15-206ENST00000447016 CALRP27797 417 aaKnown RBP16.08■□□□□ 0.17
PRDM15-206ENST00000447016 PSMA5P28066 241 aa16.08■□□□□ 0.17
PRDM15-206ENST00000447016 PDCP20941 246 aa16.08■□□□□ 0.16
PRDM15-206ENST00000447016 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
PRDM15-206ENST00000447016 RRP12Q5JTH9 1297 aaKnown RBP16.08■□□□□ 0.16
PRDM15-206ENST00000447016 OLFM4Q6UX06 510 aa16.08■□□□□ 0.16
PRDM15-206ENST00000447016 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
PRDM15-206ENST00000447016 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
PRDM15-206ENST00000447016 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
PRDM15-206ENST00000447016 NINLQ9Y2I6 1382 aa16.06■□□□□ 0.16
PRDM15-206ENST00000447016 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms