RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 PLEKHG1Q9ULL1 1385 aa27.07■■□□□ 1.92
RGPD6-204ENST00000446930 NUP155O75694 1391 aa27.05■■□□□ 1.92
RGPD6-204ENST00000446930 RRBP1Q9P2E9 1410 aaKnown RBP27.05■■□□□ 1.92
RGPD6-204ENST00000446930 MED1Q15648 1581 aaPredicted RBP27.05■■□□□ 1.92
RGPD6-204ENST00000446930 HDGFP51858 240 aaKnown RBP27.04■■□□□ 1.92
RGPD6-204ENST00000446930 RIMS2Q9UQ26 1411 aa27.04■■□□□ 1.92
RGPD6-204ENST00000446930 SOCS7O14512 581 aa27.03■■□□□ 1.92
RGPD6-204ENST00000446930 SLC26A8Q96RN1 970 aa27.03■■□□□ 1.92
RGPD6-204ENST00000446930 TMEM94Q12767 1356 aa27.02■■□□□ 1.92
RGPD6-204ENST00000446930 CHD2O14647 1828 aaKnown RBP27■■□□□ 1.91
RGPD6-204ENST00000446930 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.99■■□□□ 1.91
RGPD6-204ENST00000446930 ITGAEP38570 1179 aa26.98■■□□□ 1.91
RGPD6-204ENST00000446930 FAM135BQ49AJ0 1406 aa26.98■■□□□ 1.91
RGPD6-204ENST00000446930 DIP2AQ14689 1571 aa26.97■■□□□ 1.91
RGPD6-204ENST00000446930 PPARGC1BQ86YN6 1023 aaKnown RBP26.97■■□□□ 1.91
RGPD6-204ENST00000446930 SPHKAPQ2M3C7 1700 aa26.96■■□□□ 1.91
RGPD6-204ENST00000446930 PPP1R15AO75807 674 aaPredicted RBP26.94■■□□□ 1.9
RGPD6-204ENST00000446930 PROSER2Q86WR7 435 aaPredicted RBP26.94■■□□□ 1.9
RGPD6-204ENST00000446930 TBX22Q9Y458 520 aa26.94■■□□□ 1.9
RGPD6-204ENST00000446930 ADAMTS13Q76LX8 1427 aa26.91■■□□□ 1.9
RGPD6-204ENST00000446930 BCANQ96GW7 911 aa26.91■■□□□ 1.9
RGPD6-204ENST00000446930 PIK3R4Q99570 1358 aa26.91■■□□□ 1.9
RGPD6-204ENST00000446930 NCOA3Q9Y6Q9 1424 aa26.9■■□□□ 1.9
RGPD6-204ENST00000446930 NAIPQ13075 1403 aa26.9■■□□□ 1.9
RGPD6-204ENST00000446930 CHGAP10645 457 aaKnown RBP26.88■■□□□ 1.89
RGPD6-204ENST00000446930 MSH6P52701 1360 aa26.87■■□□□ 1.89
RGPD6-204ENST00000446930 ROBO1Q9Y6N7 1651 aa26.87■■□□□ 1.89
RGPD6-204ENST00000446930 HFM1A2PYH4 1435 aa26.84■■□□□ 1.89
RGPD6-204ENST00000446930 TRPM2O94759 1503 aa26.84■■□□□ 1.89
RGPD6-204ENST00000446930 SETBP1Q9Y6X0 1596 aa26.83■■□□□ 1.89
RGPD6-204ENST00000446930 RBM33Q96EV2 1170 aaKnown RBP26.81■■□□□ 1.88
RGPD6-204ENST00000446930 NRXN3Q9Y4C0 1643 aa26.8■■□□□ 1.88
RGPD6-204ENST00000446930 CLTCL1P53675 1640 aa26.79■■□□□ 1.88
RGPD6-204ENST00000446930 NUTM2DQ5VT03 806 aaPredicted RBP26.77■■□□□ 1.88
RGPD6-204ENST00000446930 SLAIN2Q9P270 581 aa26.77■■□□□ 1.88
RGPD6-204ENST00000446930 SENP3Q9H4L4 574 aaPredicted RBP26.76■■□□□ 1.87
RGPD6-204ENST00000446930 XRN1Q8IZH2 1706 aaKnown RBP26.76■■□□□ 1.87
RGPD6-204ENST00000446930 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
RGPD6-204ENST00000446930 KIF1BO60333 1816 aa26.74■■□□□ 1.87
RGPD6-204ENST00000446930 NEXMIFQ5QGS0 1516 aa26.74■■□□□ 1.87
RGPD6-204ENST00000446930 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.73■■□□□ 1.87
RGPD6-204ENST00000446930 PTPRUQ92729 1446 aa26.73■■□□□ 1.87
RGPD6-204ENST00000446930 C19orf44Q9H6X5 657 aa26.71■■□□□ 1.87
RGPD6-204ENST00000446930 DCCP43146 1447 aa26.7■■□□□ 1.86
RGPD6-204ENST00000446930 PHLPP1O60346 1717 aa26.7■■□□□ 1.86
RGPD6-204ENST00000446930 CADPS2Q86UW7 1296 aa26.69■■□□□ 1.86
RGPD6-204ENST00000446930 AMOTL2Q9Y2J4 779 aa26.69■■□□□ 1.86
RGPD6-204ENST00000446930 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
RGPD6-204ENST00000446930 COL16A1Q07092 1604 aaPredicted RBP26.66■■□□□ 1.86
RGPD6-204ENST00000446930 METP08581 1390 aa26.64■■□□□ 1.86
RGPD6-204ENST00000446930 C14orf37Q86TY3 774 aa26.64■■□□□ 1.86
RGPD6-204ENST00000446930 AHDC1Q5TGY3 1603 aaPredicted RBP26.64■■□□□ 1.85
RGPD6-204ENST00000446930 ATF3P18847 181 aa26.62■■□□□ 1.85
RGPD6-204ENST00000446930 RGS17Q9UGC6 210 aaPredicted RBP26.62■■□□□ 1.85
RGPD6-204ENST00000446930 JCADQ9P266 1359 aa26.61■■□□□ 1.85
RGPD6-204ENST00000446930 TRIM52Q96A61 297 aa26.61■■□□□ 1.85
RGPD6-204ENST00000446930 SLC4A1APQ9BWU0 796 aaKnown RBP26.61■■□□□ 1.85
RGPD6-204ENST00000446930 SETD1AO15047 1707 aaKnown RBP26.59■■□□□ 1.85
RGPD6-204ENST00000446930 RPGRIP1LQ68CZ1 1315 aa26.59■■□□□ 1.85
RGPD6-204ENST00000446930 PRAG1Q86YV5 1406 aa26.58■■□□□ 1.85
RGPD6-204ENST00000446930 PPLO60437 1756 aa26.57■■□□□ 1.84
RGPD6-204ENST00000446930 VGFO15240 615 aaPredicted RBP26.57■■□□□ 1.84
RGPD6-204ENST00000446930 ADGRL3Q9HAR2 1447 aa26.56■■□□□ 1.84
RGPD6-204ENST00000446930 PTCH1Q13635 1447 aa26.54■■□□□ 1.84
RGPD6-204ENST00000446930 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
RGPD6-204ENST00000446930 MST1RQ04912 1400 aa26.53■■□□□ 1.84
RGPD6-204ENST00000446930 NALCNQ8IZF0 1738 aa26.52■■□□□ 1.84
RGPD6-204ENST00000446930 ASXL1Q8IXJ9 1541 aa26.51■■□□□ 1.83
RGPD6-204ENST00000446930 SPATA31A6Q5VVP1 1343 aa26.51■■□□□ 1.83
RGPD6-204ENST00000446930 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
RGPD6-204ENST00000446930 BRINP3Q76B58 766 aa26.51■■□□□ 1.83
RGPD6-204ENST00000446930 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
RGPD6-204ENST00000446930 CCDC144AA2RUR9 1427 aa26.47■■□□□ 1.83
RGPD6-204ENST00000446930 SPATA31E1Q6ZUB1 1445 aa26.46■■□□□ 1.83
RGPD6-204ENST00000446930 LRP6O75581 1613 aa26.44■■□□□ 1.82
RGPD6-204ENST00000446930 SETD5Q9C0A6 1442 aa26.44■■□□□ 1.82
RGPD6-204ENST00000446930 IFT172Q9UG01 1749 aa26.44■■□□□ 1.82
RGPD6-204ENST00000446930 POTEAQ6S8J7 498 aa26.43■■□□□ 1.82
RGPD6-204ENST00000446930 MPHOSPH9Q99550 1183 aa26.43■■□□□ 1.82
RGPD6-204ENST00000446930 ROBO2Q9HCK4 1378 aa26.43■■□□□ 1.82
RGPD6-204ENST00000446930 LAMC1P11047 1609 aa26.42■■□□□ 1.82
RGPD6-204ENST00000446930 FOXD1Q16676 465 aa26.41■■□□□ 1.82
RGPD6-204ENST00000446930 ANKRD30BQ9BXX2 1392 aa26.4■■□□□ 1.82
RGPD6-204ENST00000446930 C1orf167Q5SNV9 1468 aa26.37■■□□□ 1.81
RGPD6-204ENST00000446930 TECPR2O15040 1411 aa26.36■■□□□ 1.81
RGPD6-204ENST00000446930 LRRC59Q96AG4 307 aaKnown RBP26.34■■□□□ 1.81
RGPD6-204ENST00000446930 CDC42BPGQ6DT37 1551 aa26.33■■□□□ 1.81
RGPD6-204ENST00000446930 ADGRF5Q8IZF2 1346 aa26.33■■□□□ 1.81
RGPD6-204ENST00000446930 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
RGPD6-204ENST00000446930 KNDC1Q76NI1 1749 aa26.31■■□□□ 1.8
RGPD6-204ENST00000446930 ZNF772Q68DY9 489 aaPredicted RBP26.3■■□□□ 1.8
RGPD6-204ENST00000446930 RGL3Q3MIN7 710 aa26.28■■□□□ 1.8
RGPD6-204ENST00000446930 MEX3CQ5U5Q3 659 aaKnown RBP26.28■■□□□ 1.8
RGPD6-204ENST00000446930 LRPPRCP42704 1394 aaKnown RBP26.28■■□□□ 1.8
RGPD6-204ENST00000446930 PNPLA6Q8IY17 1366 aa26.28■■□□□ 1.8
RGPD6-204ENST00000446930 ABCC11Q96J66 1382 aa26.27■■□□□ 1.8
RGPD6-204ENST00000446930 NRXN1Q9ULB1 1477 aa26.27■■□□□ 1.8
RGPD6-204ENST00000446930 SOS2Q07890 1332 aaPredicted RBP26.25■■□□□ 1.79
RGPD6-204ENST00000446930 MYOM2P54296 1465 aa26.24■■□□□ 1.79
RGPD6-204ENST00000446930 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms