RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
HDAC4-204ENST00000446876 KIF1BO60333 1816 aa22.11■■□□□ 1.13
HDAC4-204ENST00000446876 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
HDAC4-204ENST00000446876 NUTM2DQ5VT03 806 aaPredicted RBP22.09■■□□□ 1.13
HDAC4-204ENST00000446876 FBXO41Q8TF61 875 aa22.07■■□□□ 1.12
HDAC4-204ENST00000446876 PPP1R15AO75807 674 aaPredicted RBP22.06■■□□□ 1.12
HDAC4-204ENST00000446876 CPS1P31327 1500 aa22.06■■□□□ 1.12
HDAC4-204ENST00000446876 SLC26A8Q96RN1 970 aa22.04■■□□□ 1.12
HDAC4-204ENST00000446876 PLEKHG1Q9ULL1 1385 aa22.03■■□□□ 1.12
HDAC4-204ENST00000446876 ZNF326Q5BKZ1 582 aaKnown RBP22.03■■□□□ 1.12
HDAC4-204ENST00000446876 BCANQ96GW7 911 aa22.03■■□□□ 1.12
HDAC4-204ENST00000446876 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
HDAC4-204ENST00000446876 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
HDAC4-204ENST00000446876 HDGFP51858 240 aaKnown RBP22■■□□□ 1.11
HDAC4-204ENST00000446876 ABCF1Q8NE71 845 aaKnown RBP eCLIP22■■□□□ 1.11
HDAC4-204ENST00000446876 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
HDAC4-204ENST00000446876 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
HDAC4-204ENST00000446876 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
HDAC4-204ENST00000446876 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
HDAC4-204ENST00000446876 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
HDAC4-204ENST00000446876 PPLO60437 1756 aa21.96■■□□□ 1.11
HDAC4-204ENST00000446876 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
HDAC4-204ENST00000446876 NWD1Q149M9 1564 aa21.95■■□□□ 1.1
HDAC4-204ENST00000446876 CHD2O14647 1828 aaKnown RBP21.94■■□□□ 1.1
HDAC4-204ENST00000446876 HRCP23327 699 aa21.93■■□□□ 1.1
HDAC4-204ENST00000446876 DIP2AQ14689 1571 aa21.93■■□□□ 1.1
HDAC4-204ENST00000446876 SETBP1Q9Y6X0 1596 aa21.93■■□□□ 1.1
HDAC4-204ENST00000446876 SPATA31E1Q6ZUB1 1445 aa21.91■■□□□ 1.1
HDAC4-204ENST00000446876 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
HDAC4-204ENST00000446876 KCNA6P17658 529 aa21.9■■□□□ 1.1
HDAC4-204ENST00000446876 UBAP1LF5GYI3 381 aa21.89■■□□□ 1.09
HDAC4-204ENST00000446876 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
HDAC4-204ENST00000446876 RGL3Q3MIN7 710 aa21.88■■□□□ 1.09
HDAC4-204ENST00000446876 RBM33Q96EV2 1170 aaKnown RBP21.87■■□□□ 1.09
HDAC4-204ENST00000446876 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
HDAC4-204ENST00000446876 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
HDAC4-204ENST00000446876 ALKQ9UM73 1620 aa21.86■■□□□ 1.09
HDAC4-204ENST00000446876 SETD1AO15047 1707 aaKnown RBP21.86■■□□□ 1.09
HDAC4-204ENST00000446876 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
HDAC4-204ENST00000446876 PTPRUQ92729 1446 aa21.85■■□□□ 1.09
HDAC4-204ENST00000446876 TMEM94Q12767 1356 aa21.85■■□□□ 1.09
HDAC4-204ENST00000446876 PROSER2Q86WR7 435 aaPredicted RBP21.83■■□□□ 1.09
HDAC4-204ENST00000446876 METP08581 1390 aa21.83■■□□□ 1.08
HDAC4-204ENST00000446876 XRN1Q8IZH2 1706 aaKnown RBP21.83■■□□□ 1.08
HDAC4-204ENST00000446876 VGFO15240 615 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-204ENST00000446876 PIK3R4Q99570 1358 aa21.81■■□□□ 1.08
HDAC4-204ENST00000446876 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
HDAC4-204ENST00000446876 PIP4K2BP78356 416 aa21.79■■□□□ 1.08
HDAC4-204ENST00000446876 TRIM26Q12899 539 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-204ENST00000446876 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
HDAC4-204ENST00000446876 TOM1O60784 492 aa21.78■■□□□ 1.08
HDAC4-204ENST00000446876 AMOTL2Q9Y2J4 779 aa21.78■■□□□ 1.08
HDAC4-204ENST00000446876 PIK3C2GO75747 1445 aa21.72■■□□□ 1.07
HDAC4-204ENST00000446876 MYOM2P54296 1465 aa21.72■■□□□ 1.07
HDAC4-204ENST00000446876 ASXL1Q8IXJ9 1541 aa21.71■■□□□ 1.07
HDAC4-204ENST00000446876 MSH6P52701 1360 aa21.71■■□□□ 1.07
HDAC4-204ENST00000446876 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-204ENST00000446876 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.06
HDAC4-204ENST00000446876 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
HDAC4-204ENST00000446876 NALCNQ8IZF0 1738 aa21.67■■□□□ 1.06
HDAC4-204ENST00000446876 NCOA3Q9Y6Q9 1424 aa21.66■■□□□ 1.06
HDAC4-204ENST00000446876 DHX57Q6P158 1386 aaKnown RBP21.65■■□□□ 1.06
HDAC4-204ENST00000446876 ROBO2Q9HCK4 1378 aa21.65■■□□□ 1.06
HDAC4-204ENST00000446876 LAMC1P11047 1609 aa21.65■■□□□ 1.06
HDAC4-204ENST00000446876 PTCH1Q13635 1447 aa21.64■■□□□ 1.06
HDAC4-204ENST00000446876 ROBO1Q9Y6N7 1651 aa21.64■■□□□ 1.05
HDAC4-204ENST00000446876 HSPA1LP34931 641 aa21.64■■□□□ 1.05
HDAC4-204ENST00000446876 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
HDAC4-204ENST00000446876 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
HDAC4-204ENST00000446876 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
HDAC4-204ENST00000446876 CFAP70Q5T0N1 1121 aa21.62■■□□□ 1.05
HDAC4-204ENST00000446876 KNDC1Q76NI1 1749 aa21.62■■□□□ 1.05
HDAC4-204ENST00000446876 PRAG1Q86YV5 1406 aa21.62■■□□□ 1.05
HDAC4-204ENST00000446876 STK26Q9P289 416 aa21.61■■□□□ 1.05
HDAC4-204ENST00000446876 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
HDAC4-204ENST00000446876 C14orf93Q9H972 538 aaKnown RBP21.6■■□□□ 1.05
HDAC4-204ENST00000446876 ADGRL3Q9HAR2 1447 aa21.6■■□□□ 1.05
HDAC4-204ENST00000446876 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
HDAC4-204ENST00000446876 LRPPRCP42704 1394 aaKnown RBP21.59■■□□□ 1.05
HDAC4-204ENST00000446876 YTHDC2Q9H6S0 1430 aaKnown RBP21.58■■□□□ 1.05
HDAC4-204ENST00000446876 SLAIN2Q9P270 581 aa21.58■■□□□ 1.05
HDAC4-204ENST00000446876 TECPR2O15040 1411 aa21.57■■□□□ 1.04
HDAC4-204ENST00000446876 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
HDAC4-204ENST00000446876 ATF3P18847 181 aa21.57■■□□□ 1.04
HDAC4-204ENST00000446876 ADGRB1O14514 1584 aa21.56■■□□□ 1.04
HDAC4-204ENST00000446876 DCCP43146 1447 aa21.55■■□□□ 1.04
HDAC4-204ENST00000446876 CADPS2Q86UW7 1296 aa21.55■■□□□ 1.04
HDAC4-204ENST00000446876 ABCC11Q96J66 1382 aa21.54■■□□□ 1.04
HDAC4-204ENST00000446876 PLEKHH1Q9ULM0 1364 aa21.54■■□□□ 1.04
HDAC4-204ENST00000446876 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
HDAC4-204ENST00000446876 WAPLQ7Z5K2 1190 aa21.53■■□□□ 1.04
HDAC4-204ENST00000446876 MST1RQ04912 1400 aa21.53■■□□□ 1.04
HDAC4-204ENST00000446876 PHLPP1O60346 1717 aa21.51■■□□□ 1.03
HDAC4-204ENST00000446876 PCGF6Q9BYE7 350 aa21.5■■□□□ 1.03
HDAC4-204ENST00000446876 STAC3Q96MF2 364 aa21.49■■□□□ 1.03
HDAC4-204ENST00000446876 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
HDAC4-204ENST00000446876 CDC42BPGQ6DT37 1551 aa21.48■■□□□ 1.03
HDAC4-204ENST00000446876 KIAA1210Q9ULL0 1709 aa21.47■■□□□ 1.03
HDAC4-204ENST00000446876 DLC1Q96QB1 1528 aa21.46■■□□□ 1.03
HDAC4-204ENST00000446876 COL16A1Q07092 1604 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms