RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 ARHGEF5Q12774 1597 aa21.27■■□□□ 1
HDAC11-214ENST00000446613 SYNJ2O15056 1496 aa21.26■□□□□ 0.99
HDAC11-214ENST00000446613 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
HDAC11-214ENST00000446613 USP19O94966 1318 aa21.26■□□□□ 0.99
HDAC11-214ENST00000446613 CDC42BPBQ9Y5S2 1711 aa21.26■□□□□ 0.99
HDAC11-214ENST00000446613 SLKQ9H2G2 1235 aaPredicted RBP21.25■□□□□ 0.99
HDAC11-214ENST00000446613 POGKQ9P215 609 aa21.25■□□□□ 0.99
HDAC11-214ENST00000446613 PANK1Q8TE04 598 aa21.23■□□□□ 0.99
HDAC11-214ENST00000446613 COG6Q9Y2V7 657 aa21.22■□□□□ 0.99
HDAC11-214ENST00000446613 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
HDAC11-214ENST00000446613 LAMC1P11047 1609 aa21.2■□□□□ 0.99
HDAC11-214ENST00000446613 ARXQ96QS3 562 aa21.2■□□□□ 0.98
HDAC11-214ENST00000446613 NUP160Q12769 1436 aa21.19■□□□□ 0.98
HDAC11-214ENST00000446613 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
HDAC11-214ENST00000446613 NKTRP30414 1462 aaKnown RBP21.18■□□□□ 0.98
HDAC11-214ENST00000446613 TNNQ9UQP3 1299 aa21.17■□□□□ 0.98
HDAC11-214ENST00000446613 UNC13BO14795 1591 aa21.17■□□□□ 0.98
HDAC11-214ENST00000446613 EIF2AK4Q9P2K8 1649 aaKnown RBP21.17■□□□□ 0.98
HDAC11-214ENST00000446613 ARHGAP5Q13017 1502 aa21.17■□□□□ 0.98
HDAC11-214ENST00000446613 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
HDAC11-214ENST00000446613 CANXP27824 592 aaKnown RBP21.15■□□□□ 0.98
HDAC11-214ENST00000446613 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
HDAC11-214ENST00000446613 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
HDAC11-214ENST00000446613 RRP7AQ9Y3A4 280 aaKnown RBP21.15■□□□□ 0.98
HDAC11-214ENST00000446613 ASXL1Q8IXJ9 1541 aa21.14■□□□□ 0.97
HDAC11-214ENST00000446613 SPRYD3Q8NCJ5 442 aa21.13■□□□□ 0.97
HDAC11-214ENST00000446613 BCL2L13Q9BXK5 485 aa21.13■□□□□ 0.97
HDAC11-214ENST00000446613 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
HDAC11-214ENST00000446613 CLUAP1Q96AJ1 413 aa21.13■□□□□ 0.97
HDAC11-214ENST00000446613 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
HDAC11-214ENST00000446613 IQGAP3Q86VI3 1631 aa21.12■□□□□ 0.97
HDAC11-214ENST00000446613 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
HDAC11-214ENST00000446613 E9PSI1 815 aa21.12■□□□□ 0.97
HDAC11-214ENST00000446613 PIK3C2GO75747 1445 aa21.11■□□□□ 0.97
HDAC11-214ENST00000446613 CARD14Q9BXL6 1004 aa21.11■□□□□ 0.97
HDAC11-214ENST00000446613 CENPJQ9HC77 1338 aaPredicted RBP21.1■□□□□ 0.97
HDAC11-214ENST00000446613 RLBP1P12271 317 aa21.08■□□□□ 0.97
HDAC11-214ENST00000446613 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
HDAC11-214ENST00000446613 PCDHB15Q9Y5E8 787 aa21.08■□□□□ 0.96
HDAC11-214ENST00000446613 MADDQ8WXG6 1647 aa21.08■□□□□ 0.96
HDAC11-214ENST00000446613 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
HDAC11-214ENST00000446613 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
HDAC11-214ENST00000446613 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 CGNL1Q0VF96 1302 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 SYNMO15061 1565 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 MYOM1P52179 1685 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
HDAC11-214ENST00000446613 SCAF11Q99590 1463 aaKnown RBP21.05■□□□□ 0.96
HDAC11-214ENST00000446613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.05■□□□□ 0.96
HDAC11-214ENST00000446613 FAM43AQ8N2R8 423 aa21.05■□□□□ 0.96
HDAC11-214ENST00000446613 ATP10AO60312 1499 aa21.05■□□□□ 0.96
HDAC11-214ENST00000446613 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
HDAC11-214ENST00000446613 RRAGDQ9NQL2 400 aaPredicted RBP21.05■□□□□ 0.96
HDAC11-214ENST00000446613 PDE3AQ14432 1141 aa21.04■□□□□ 0.96
HDAC11-214ENST00000446613 ANTXR1Q9H6X2 564 aa21.04■□□□□ 0.96
HDAC11-214ENST00000446613 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
HDAC11-214ENST00000446613 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
HDAC11-214ENST00000446613 ABCC2Q92887 1545 aa21.03■□□□□ 0.96
HDAC11-214ENST00000446613 BECN1Q14457 450 aa21.03■□□□□ 0.96
HDAC11-214ENST00000446613 MAPK8IP3Q9UPT6 1336 aa21.02■□□□□ 0.96
HDAC11-214ENST00000446613 TBC1D2Q9BYX2 928 aa21.02■□□□□ 0.96
HDAC11-214ENST00000446613 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
HDAC11-214ENST00000446613 PDZRN3Q9UPQ7 1066 aa21.01■□□□□ 0.95
HDAC11-214ENST00000446613 DUOX2Q9NRD8 1548 aa21■□□□□ 0.95
HDAC11-214ENST00000446613 RARSP54136 660 aaKnown RBP20.99■□□□□ 0.95
HDAC11-214ENST00000446613 PLXNC1O60486 1568 aa20.99■□□□□ 0.95
HDAC11-214ENST00000446613 AFAP1Q8N556 730 aa20.99■□□□□ 0.95
HDAC11-214ENST00000446613 TBC1D32Q96NH3 1257 aa20.97■□□□□ 0.95
HDAC11-214ENST00000446613 TRAPPC8Q9Y2L5 1435 aa20.97■□□□□ 0.95
HDAC11-214ENST00000446613 PANK2Q9BZ23 570 aa20.96■□□□□ 0.95
HDAC11-214ENST00000446613 NPC1L1Q9UHC9 1359 aa20.96■□□□□ 0.95
HDAC11-214ENST00000446613 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
HDAC11-214ENST00000446613 ADGRF5Q8IZF2 1346 aa20.96■□□□□ 0.95
HDAC11-214ENST00000446613 ERVK-7P63135 1459 aa20.95■□□□□ 0.94
HDAC11-214ENST00000446613 UBE2Q2Q8WVN8 375 aa20.95■□□□□ 0.94
HDAC11-214ENST00000446613 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
HDAC11-214ENST00000446613 UPF2Q9HAU5 1272 aaKnown RBP20.93■□□□□ 0.94
HDAC11-214ENST00000446613 SPHKAPQ2M3C7 1700 aa20.93■□□□□ 0.94
HDAC11-214ENST00000446613 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
HDAC11-214ENST00000446613 KDM5AP29375 1690 aaKnown RBP20.93■□□□□ 0.94
HDAC11-214ENST00000446613 XRCC6P12956 609 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC11-214ENST00000446613 CEP152O94986 1710 aa20.92■□□□□ 0.94
HDAC11-214ENST00000446613 SCAPERQ9BY12 1400 aa20.92■□□□□ 0.94
HDAC11-214ENST00000446613 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
HDAC11-214ENST00000446613 PMFBP1Q8TBY8 1022 aa20.91■□□□□ 0.94
HDAC11-214ENST00000446613 UGGT1Q9NYU2 1555 aa20.91■□□□□ 0.94
HDAC11-214ENST00000446613 MORC1Q86VD1 984 aa20.91■□□□□ 0.94
HDAC11-214ENST00000446613 MFAP1P55081 439 aaKnown RBP20.9■□□□□ 0.94
HDAC11-214ENST00000446613 TRPM2O94759 1503 aa20.88■□□□□ 0.93
HDAC11-214ENST00000446613 SPAG9O60271 1321 aaKnown RBP20.88■□□□□ 0.93
HDAC11-214ENST00000446613 EFCAB2Q5VUJ9 269 aa20.87■□□□□ 0.93
HDAC11-214ENST00000446613 RUNDC1Q96C34 613 aa20.87■□□□□ 0.93
HDAC11-214ENST00000446613 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
HDAC11-214ENST00000446613 POLR3AO14802 1390 aaPredicted RBP20.87■□□□□ 0.93
HDAC11-214ENST00000446613 NSD3Q9BZ95 1437 aa20.86■□□□□ 0.93
HDAC11-214ENST00000446613 MCM4P33991 863 aa20.86■□□□□ 0.93
HDAC11-214ENST00000446613 MTHFSP49914 203 aa20.86■□□□□ 0.93
HDAC11-214ENST00000446613 L1TD1Q5T7N2 865 aaKnown RBP20.86■□□□□ 0.93
HDAC11-214ENST00000446613 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms