RNA–Protein interactions for RNA: ENST00000445558.6

PSMD2-207, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 5

Gene PSMD2, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-207ENST00000445558 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
PSMD2-207ENST00000445558 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
PSMD2-207ENST00000445558 POTEAQ6S8J7 498 aa16.73■□□□□ 0.27
PSMD2-207ENST00000445558 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
PSMD2-207ENST00000445558 HDGFP51858 240 aaKnown RBP16.72■□□□□ 0.27
PSMD2-207ENST00000445558 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
PSMD2-207ENST00000445558 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
PSMD2-207ENST00000445558 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
PSMD2-207ENST00000445558 ANKRD50Q9ULJ7 1429 aa16.7■□□□□ 0.26
PSMD2-207ENST00000445558 FAM50AQ14320 339 aaKnown RBP16.7■□□□□ 0.26
PSMD2-207ENST00000445558 JCADQ9P266 1359 aa16.69■□□□□ 0.26
PSMD2-207ENST00000445558 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
PSMD2-207ENST00000445558 RIMS2Q9UQ26 1411 aa16.68■□□□□ 0.26
PSMD2-207ENST00000445558 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
PSMD2-207ENST00000445558 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.66■□□□□ 0.26
PSMD2-207ENST00000445558 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
PSMD2-207ENST00000445558 TBX22Q9Y458 520 aa16.65■□□□□ 0.26
PSMD2-207ENST00000445558 NCOA3Q9Y6Q9 1424 aa16.64■□□□□ 0.25
PSMD2-207ENST00000445558 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
PSMD2-207ENST00000445558 CADPS2Q86UW7 1296 aa16.62■□□□□ 0.25
PSMD2-207ENST00000445558 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
PSMD2-207ENST00000445558 ATF3P18847 181 aa16.61■□□□□ 0.25
PSMD2-207ENST00000445558 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
PSMD2-207ENST00000445558 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
PSMD2-207ENST00000445558 NUTM2DQ5VT03 806 aaPredicted RBP16.6■□□□□ 0.25
PSMD2-207ENST00000445558 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
PSMD2-207ENST00000445558 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
PSMD2-207ENST00000445558 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
PSMD2-207ENST00000445558 PIK3R4Q99570 1358 aa16.59■□□□□ 0.25
PSMD2-207ENST00000445558 ADAMTS13Q76LX8 1427 aa16.59■□□□□ 0.25
PSMD2-207ENST00000445558 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
PSMD2-207ENST00000445558 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.24
PSMD2-207ENST00000445558 DIP2AQ14689 1571 aa16.58■□□□□ 0.24
PSMD2-207ENST00000445558 LRP6O75581 1613 aa16.56■□□□□ 0.24
PSMD2-207ENST00000445558 UNC13BO14795 1591 aa16.56■□□□□ 0.24
PSMD2-207ENST00000445558 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
PSMD2-207ENST00000445558 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
PSMD2-207ENST00000445558 AHDC1Q5TGY3 1603 aaPredicted RBP16.55■□□□□ 0.24
PSMD2-207ENST00000445558 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
PSMD2-207ENST00000445558 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
PSMD2-207ENST00000445558 TRIM52Q96A61 297 aa16.53■□□□□ 0.24
PSMD2-207ENST00000445558 TRPM2O94759 1503 aa16.53■□□□□ 0.24
PSMD2-207ENST00000445558 NUP155O75694 1391 aa16.52■□□□□ 0.24
PSMD2-207ENST00000445558 BRINP3Q76B58 766 aa16.52■□□□□ 0.24
PSMD2-207ENST00000445558 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.51■□□□□ 0.23
PSMD2-207ENST00000445558 E9PCH4 1651 aa16.51■□□□□ 0.23
PSMD2-207ENST00000445558 DCCP43146 1447 aa16.51■□□□□ 0.23
PSMD2-207ENST00000445558 IQGAP3Q86VI3 1631 aa16.5■□□□□ 0.23
PSMD2-207ENST00000445558 PTPRUQ92729 1446 aa16.5■□□□□ 0.23
PSMD2-207ENST00000445558 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
PSMD2-207ENST00000445558 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
PSMD2-207ENST00000445558 RXRBP28702 533 aa16.49■□□□□ 0.23
PSMD2-207ENST00000445558 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
PSMD2-207ENST00000445558 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
PSMD2-207ENST00000445558 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
PSMD2-207ENST00000445558 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
PSMD2-207ENST00000445558 ITGAEP38570 1179 aa16.46■□□□□ 0.23
PSMD2-207ENST00000445558 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
PSMD2-207ENST00000445558 MST1RQ04912 1400 aa16.45■□□□□ 0.22
PSMD2-207ENST00000445558 SETD5Q9C0A6 1442 aa16.45■□□□□ 0.22
PSMD2-207ENST00000445558 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
PSMD2-207ENST00000445558 AFF2P51816 1311 aa16.44■□□□□ 0.22
PSMD2-207ENST00000445558 CDK12Q9NYV4 1490 aaPredicted RBP16.43■□□□□ 0.22
PSMD2-207ENST00000445558 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
PSMD2-207ENST00000445558 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
PSMD2-207ENST00000445558 METP08581 1390 aa16.42■□□□□ 0.22
PSMD2-207ENST00000445558 ADGRL3Q9HAR2 1447 aa16.41■□□□□ 0.22
PSMD2-207ENST00000445558 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
PSMD2-207ENST00000445558 C8orf37Q96NL8 207 aa16.4■□□□□ 0.22
PSMD2-207ENST00000445558 SRCAPQ6ZRS2 3230 aa16.39■□□□□ 0.21
PSMD2-207ENST00000445558 DDX17Q92841 729 aaKnown RBP16.38■□□□□ 0.21
PSMD2-207ENST00000445558 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
PSMD2-207ENST00000445558 NHSL1Q5SYE7 1610 aa16.37■□□□□ 0.21
PSMD2-207ENST00000445558 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
PSMD2-207ENST00000445558 SPHKAPQ2M3C7 1700 aa16.36■□□□□ 0.21
PSMD2-207ENST00000445558 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
PSMD2-207ENST00000445558 RGS12O14924 1447 aa16.35■□□□□ 0.21
PSMD2-207ENST00000445558 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
PSMD2-207ENST00000445558 NEXMIFQ5QGS0 1516 aa16.34■□□□□ 0.21
PSMD2-207ENST00000445558 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
PSMD2-207ENST00000445558 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
PSMD2-207ENST00000445558 C1orf167Q5SNV9 1468 aa16.33■□□□□ 0.2
PSMD2-207ENST00000445558 CLTCL1P53675 1640 aa16.31■□□□□ 0.2
PSMD2-207ENST00000445558 VGFO15240 615 aaPredicted RBP16.31■□□□□ 0.2
PSMD2-207ENST00000445558 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
PSMD2-207ENST00000445558 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
PSMD2-207ENST00000445558 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
PSMD2-207ENST00000445558 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
PSMD2-207ENST00000445558 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
PSMD2-207ENST00000445558 USP21Q9UK80 565 aa16.28■□□□□ 0.2
PSMD2-207ENST00000445558 ATAD2Q6PL18 1390 aa16.27■□□□□ 0.2
PSMD2-207ENST00000445558 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
PSMD2-207ENST00000445558 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
PSMD2-207ENST00000445558 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
PSMD2-207ENST00000445558 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
PSMD2-207ENST00000445558 LAMC1P11047 1609 aa16.25■□□□□ 0.19
PSMD2-207ENST00000445558 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
PSMD2-207ENST00000445558 NAIPQ13075 1403 aa16.24■□□□□ 0.19
PSMD2-207ENST00000445558 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
PSMD2-207ENST00000445558 FOXD1Q16676 465 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms