RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SETD5Q9C0A6 1442 aa27.82■■■□□ 2.04
CCDC188-202ENST00000444532 TRPM2O94759 1503 aa27.81■■■□□ 2.04
CCDC188-202ENST00000444532 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
CCDC188-202ENST00000444532 STRCP1A6NGW2 1772 aa27.78■■■□□ 2.04
CCDC188-202ENST00000444532 PLEKHG1Q9ULL1 1385 aa27.77■■■□□ 2.04
CCDC188-202ENST00000444532 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
CCDC188-202ENST00000444532 BCANQ96GW7 911 aa27.75■■■□□ 2.03
CCDC188-202ENST00000444532 SLC26A8Q96RN1 970 aa27.74■■■□□ 2.03
CCDC188-202ENST00000444532 MPHOSPH9Q99550 1183 aa27.74■■■□□ 2.03
CCDC188-202ENST00000444532 KIF1BO60333 1816 aa27.74■■■□□ 2.03
CCDC188-202ENST00000444532 UBAP1LF5GYI3 381 aa27.7■■■□□ 2.02
CCDC188-202ENST00000444532 ZNF326Q5BKZ1 582 aaKnown RBP27.7■■■□□ 2.02
CCDC188-202ENST00000444532 LRRC7Q96NW7 1537 aa27.7■■■□□ 2.02
CCDC188-202ENST00000444532 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
CCDC188-202ENST00000444532 KCNA6P17658 529 aa27.68■■■□□ 2.02
CCDC188-202ENST00000444532 NUTM2DQ5VT03 806 aaPredicted RBP27.68■■■□□ 2.02
CCDC188-202ENST00000444532 FOXD1Q16676 465 aa27.67■■■□□ 2.02
CCDC188-202ENST00000444532 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
CCDC188-202ENST00000444532 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
CCDC188-202ENST00000444532 TOM1O60784 492 aa27.63■■■□□ 2.01
CCDC188-202ENST00000444532 HRCP23327 699 aa27.63■■■□□ 2.01
CCDC188-202ENST00000444532 DIP2AQ14689 1571 aa27.63■■■□□ 2.01
CCDC188-202ENST00000444532 ADAMTS13Q76LX8 1427 aa27.61■■■□□ 2.01
CCDC188-202ENST00000444532 CHD2O14647 1828 aaKnown RBP27.61■■■□□ 2.01
CCDC188-202ENST00000444532 NEXMIFQ5QGS0 1516 aa27.61■■■□□ 2.01
CCDC188-202ENST00000444532 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
CCDC188-202ENST00000444532 CCDC144AA2RUR9 1427 aa27.58■■■□□ 2.01
CCDC188-202ENST00000444532 NKTRP30414 1462 aaKnown RBP27.58■■■□□ 2.01
CCDC188-202ENST00000444532 XIRP1Q702N8 1843 aaKnown RBP27.58■■■□□ 2.01
CCDC188-202ENST00000444532 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
CCDC188-202ENST00000444532 PIK3R4Q99570 1358 aa27.58■■■□□ 2.01
CCDC188-202ENST00000444532 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
CCDC188-202ENST00000444532 PROSER2Q86WR7 435 aaPredicted RBP27.56■■■□□ 2
CCDC188-202ENST00000444532 VGFO15240 615 aaPredicted RBP27.55■■■□□ 2
CCDC188-202ENST00000444532 NRXN3Q9Y4C0 1643 aa27.53■■■□□ 2
CCDC188-202ENST00000444532 TMEM94Q12767 1356 aa27.52■■■□□ 2
CCDC188-202ENST00000444532 ALKQ9UM73 1620 aa27.5■■□□□ 1.99
CCDC188-202ENST00000444532 PIP4K2BP78356 416 aa27.5■■□□□ 1.99
CCDC188-202ENST00000444532 PPLO60437 1756 aa27.5■■□□□ 1.99
CCDC188-202ENST00000444532 SCAF1Q9H7N4 1312 aaKnown RBP27.48■■□□□ 1.99
CCDC188-202ENST00000444532 SPATA31E1Q6ZUB1 1445 aa27.48■■□□□ 1.99
CCDC188-202ENST00000444532 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
CCDC188-202ENST00000444532 AMOTL2Q9Y2J4 779 aa27.45■■□□□ 1.98
CCDC188-202ENST00000444532 NCOA3Q9Y6Q9 1424 aa27.44■■□□□ 1.98
CCDC188-202ENST00000444532 RBM33Q96EV2 1170 aaKnown RBP27.44■■□□□ 1.98
CCDC188-202ENST00000444532 PTPRUQ92729 1446 aa27.43■■□□□ 1.98
CCDC188-202ENST00000444532 METP08581 1390 aa27.42■■□□□ 1.98
CCDC188-202ENST00000444532 MSH6P52701 1360 aa27.41■■□□□ 1.98
CCDC188-202ENST00000444532 ANKRD30BQ9BXX2 1392 aa27.41■■□□□ 1.98
CCDC188-202ENST00000444532 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
CCDC188-202ENST00000444532 XRN1Q8IZH2 1706 aaKnown RBP27.39■■□□□ 1.98
CCDC188-202ENST00000444532 SETD1AO15047 1707 aaKnown RBP27.37■■□□□ 1.97
CCDC188-202ENST00000444532 HSPA1LP34931 641 aa27.35■■□□□ 1.97
CCDC188-202ENST00000444532 ADGRF5Q8IZF2 1346 aa27.35■■□□□ 1.97
CCDC188-202ENST00000444532 C14orf37Q86TY3 774 aa27.34■■□□□ 1.97
CCDC188-202ENST00000444532 C19orf44Q9H6X5 657 aa27.32■■□□□ 1.96
CCDC188-202ENST00000444532 FAM135BQ49AJ0 1406 aa27.32■■□□□ 1.96
CCDC188-202ENST00000444532 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.3■■□□□ 1.96
CCDC188-202ENST00000444532 SLAIN2Q9P270 581 aa27.29■■□□□ 1.96
CCDC188-202ENST00000444532 CADPS2Q86UW7 1296 aa27.28■■□□□ 1.96
CCDC188-202ENST00000444532 PIK3C2GO75747 1445 aa27.26■■□□□ 1.95
CCDC188-202ENST00000444532 ATF3P18847 181 aa27.26■■□□□ 1.95
CCDC188-202ENST00000444532 MYOM2P54296 1465 aa27.25■■□□□ 1.95
CCDC188-202ENST00000444532 PRAG1Q86YV5 1406 aa27.25■■□□□ 1.95
CCDC188-202ENST00000444532 ROBO1Q9Y6N7 1651 aa27.24■■□□□ 1.95
CCDC188-202ENST00000444532 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
CCDC188-202ENST00000444532 NRXN1Q9ULB1 1477 aa27.23■■□□□ 1.95
CCDC188-202ENST00000444532 DCCP43146 1447 aa27.23■■□□□ 1.95
CCDC188-202ENST00000444532 STAC3Q96MF2 364 aa27.2■■□□□ 1.94
CCDC188-202ENST00000444532 ADGRL3Q9HAR2 1447 aa27.19■■□□□ 1.94
CCDC188-202ENST00000444532 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
CCDC188-202ENST00000444532 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
CCDC188-202ENST00000444532 ROBO2Q9HCK4 1378 aa27.19■■□□□ 1.94
CCDC188-202ENST00000444532 LAMC1P11047 1609 aa27.17■■□□□ 1.94
CCDC188-202ENST00000444532 NALCNQ8IZF0 1738 aa27.16■■□□□ 1.94
CCDC188-202ENST00000444532 DCAF11Q8TEB1 546 aa27.16■■□□□ 1.94
CCDC188-202ENST00000444532 LRPPRCP42704 1394 aaKnown RBP27.16■■□□□ 1.94
CCDC188-202ENST00000444532 TMEM132EQ6IEE7 984 aa27.15■■□□□ 1.94
CCDC188-202ENST00000444532 ABCC11Q96J66 1382 aa27.14■■□□□ 1.94
CCDC188-202ENST00000444532 ASXL1Q8IXJ9 1541 aa27.14■■□□□ 1.94
CCDC188-202ENST00000444532 TECPR2O15040 1411 aa27.14■■□□□ 1.93
CCDC188-202ENST00000444532 CFAP70Q5T0N1 1121 aa27.13■■□□□ 1.93
CCDC188-202ENST00000444532 STK26Q9P289 416 aa27.13■■□□□ 1.93
CCDC188-202ENST00000444532 KDM2AQ9Y2K7 1162 aa27.13■■□□□ 1.93
CCDC188-202ENST00000444532 KNDC1Q76NI1 1749 aa27.12■■□□□ 1.93
CCDC188-202ENST00000444532 YTHDC2Q9H6S0 1430 aaKnown RBP27.11■■□□□ 1.93
CCDC188-202ENST00000444532 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
CCDC188-202ENST00000444532 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
CCDC188-202ENST00000444532 MST1RQ04912 1400 aa27.09■■□□□ 1.93
CCDC188-202ENST00000444532 PHLPP1O60346 1717 aa27.08■■□□□ 1.93
CCDC188-202ENST00000444532 SIRT1Q96EB6 747 aa27.08■■□□□ 1.93
CCDC188-202ENST00000444532 BRINP3Q76B58 766 aa27.06■■□□□ 1.92
CCDC188-202ENST00000444532 WAPLQ7Z5K2 1190 aa27.04■■□□□ 1.92
CCDC188-202ENST00000444532 MED1Q15648 1581 aaPredicted RBP27.03■■□□□ 1.92
CCDC188-202ENST00000444532 AHDC1Q5TGY3 1603 aaPredicted RBP27.03■■□□□ 1.92
CCDC188-202ENST00000444532 ADGRB1O14514 1584 aa27.01■■□□□ 1.91
CCDC188-202ENST00000444532 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
CCDC188-202ENST00000444532 COL16A1Q07092 1604 aaPredicted RBP27■■□□□ 1.91
CCDC188-202ENST00000444532 CDC42BPGQ6DT37 1551 aa27■■□□□ 1.91
CCDC188-202ENST00000444532 PLEKHH1Q9ULM0 1364 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms