RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 RIMS2Q9UQ26 1411 aa25.05■■□□□ 1.6
TSPAN9-204ENST00000444315 SLC4A1APQ9BWU0 796 aaKnown RBP25.04■■□□□ 1.6
TSPAN9-204ENST00000444315 ZNF326Q5BKZ1 582 aaKnown RBP25.03■■□□□ 1.6
TSPAN9-204ENST00000444315 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
TSPAN9-204ENST00000444315 SLC26A8Q96RN1 970 aa25.02■■□□□ 1.6
TSPAN9-204ENST00000444315 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
TSPAN9-204ENST00000444315 STRCP1A6NGW2 1772 aa25■■□□□ 1.59
TSPAN9-204ENST00000444315 TOM1O60784 492 aa24.98■■□□□ 1.59
TSPAN9-204ENST00000444315 PIP4K2BP78356 416 aa24.98■■□□□ 1.59
TSPAN9-204ENST00000444315 KIF1BO60333 1816 aa24.98■■□□□ 1.59
TSPAN9-204ENST00000444315 ZFYVE9O95405 1425 aa24.95■■□□□ 1.59
TSPAN9-204ENST00000444315 TRPM2O94759 1503 aa24.95■■□□□ 1.58
TSPAN9-204ENST00000444315 PLEKHG1Q9ULL1 1385 aa24.94■■□□□ 1.58
TSPAN9-204ENST00000444315 CLTCL1P53675 1640 aa24.94■■□□□ 1.58
TSPAN9-204ENST00000444315 LRRC7Q96NW7 1537 aa24.93■■□□□ 1.58
TSPAN9-204ENST00000444315 SETD5Q9C0A6 1442 aa24.89■■□□□ 1.58
TSPAN9-204ENST00000444315 PROSER2Q86WR7 435 aaPredicted RBP24.89■■□□□ 1.58
TSPAN9-204ENST00000444315 KCNA6P17658 529 aa24.88■■□□□ 1.57
TSPAN9-204ENST00000444315 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
TSPAN9-204ENST00000444315 FOXD1Q16676 465 aa24.86■■□□□ 1.57
TSPAN9-204ENST00000444315 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
TSPAN9-204ENST00000444315 C14orf37Q86TY3 774 aa24.84■■□□□ 1.57
TSPAN9-204ENST00000444315 MPHOSPH9Q99550 1183 aa24.83■■□□□ 1.57
TSPAN9-204ENST00000444315 NKTRP30414 1462 aaKnown RBP24.83■■□□□ 1.56
TSPAN9-204ENST00000444315 TMEM94Q12767 1356 aa24.82■■□□□ 1.56
TSPAN9-204ENST00000444315 NWD1Q149M9 1564 aa24.82■■□□□ 1.56
TSPAN9-204ENST00000444315 CHD2O14647 1828 aaKnown RBP24.82■■□□□ 1.56
TSPAN9-204ENST00000444315 CCDC144AA2RUR9 1427 aa24.81■■□□□ 1.56
TSPAN9-204ENST00000444315 RBM33Q96EV2 1170 aaKnown RBP24.81■■□□□ 1.56
TSPAN9-204ENST00000444315 XIRP1Q702N8 1843 aaKnown RBP24.81■■□□□ 1.56
TSPAN9-204ENST00000444315 TBX22Q9Y458 520 aa24.8■■□□□ 1.56
TSPAN9-204ENST00000444315 RAB3GAP2Q9H2M9 1393 aa24.8■■□□□ 1.56
TSPAN9-204ENST00000444315 NEXMIFQ5QGS0 1516 aa24.77■■□□□ 1.56
TSPAN9-204ENST00000444315 MSH6P52701 1360 aa24.77■■□□□ 1.56
TSPAN9-204ENST00000444315 ADAMTS13Q76LX8 1427 aa24.76■■□□□ 1.55
TSPAN9-204ENST00000444315 SETBP1Q9Y6X0 1596 aa24.73■■□□□ 1.55
TSPAN9-204ENST00000444315 PIK3R4Q99570 1358 aa24.73■■□□□ 1.55
TSPAN9-204ENST00000444315 VGFO15240 615 aaPredicted RBP24.73■■□□□ 1.55
TSPAN9-204ENST00000444315 HSPA1LP34931 641 aa24.73■■□□□ 1.55
TSPAN9-204ENST00000444315 RGL3Q3MIN7 710 aa24.72■■□□□ 1.55
TSPAN9-204ENST00000444315 DISP3Q9P2K9 1392 aa24.7■■□□□ 1.55
TSPAN9-204ENST00000444315 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
TSPAN9-204ENST00000444315 AMOTL2Q9Y2J4 779 aa24.7■■□□□ 1.54
TSPAN9-204ENST00000444315 NRXN3Q9Y4C0 1643 aa24.7■■□□□ 1.54
TSPAN9-204ENST00000444315 PPLO60437 1756 aa24.7■■□□□ 1.54
TSPAN9-204ENST00000444315 ALKQ9UM73 1620 aa24.68■■□□□ 1.54
TSPAN9-204ENST00000444315 ATF3P18847 181 aa24.64■■□□□ 1.54
TSPAN9-204ENST00000444315 METP08581 1390 aa24.62■■□□□ 1.53
TSPAN9-204ENST00000444315 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
TSPAN9-204ENST00000444315 PTPRUQ92729 1446 aa24.61■■□□□ 1.53
TSPAN9-204ENST00000444315 XRN1Q8IZH2 1706 aaKnown RBP24.61■■□□□ 1.53
TSPAN9-204ENST00000444315 NCOA3Q9Y6Q9 1424 aa24.59■■□□□ 1.53
TSPAN9-204ENST00000444315 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.53
TSPAN9-204ENST00000444315 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
TSPAN9-204ENST00000444315 CADPS2Q86UW7 1296 aa24.57■■□□□ 1.52
TSPAN9-204ENST00000444315 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
TSPAN9-204ENST00000444315 SLAIN2Q9P270 581 aa24.57■■□□□ 1.52
TSPAN9-204ENST00000444315 IFT172Q9UG01 1749 aa24.57■■□□□ 1.52
TSPAN9-204ENST00000444315 FAM135BQ49AJ0 1406 aa24.55■■□□□ 1.52
TSPAN9-204ENST00000444315 SPATA31E1Q6ZUB1 1445 aa24.55■■□□□ 1.52
TSPAN9-204ENST00000444315 SETD1AO15047 1707 aaKnown RBP24.53■■□□□ 1.52
TSPAN9-204ENST00000444315 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
TSPAN9-204ENST00000444315 ADGRF5Q8IZF2 1346 aa24.53■■□□□ 1.52
TSPAN9-204ENST00000444315 HRCP23327 699 aa24.52■■□□□ 1.52
TSPAN9-204ENST00000444315 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
TSPAN9-204ENST00000444315 MED1Q15648 1581 aaPredicted RBP24.5■■□□□ 1.51
TSPAN9-204ENST00000444315 STK26Q9P289 416 aa24.49■■□□□ 1.51
TSPAN9-204ENST00000444315 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
TSPAN9-204ENST00000444315 DCCP43146 1447 aa24.46■■□□□ 1.51
TSPAN9-204ENST00000444315 PTCH1Q13635 1447 aa24.46■■□□□ 1.51
TSPAN9-204ENST00000444315 ADGRL3Q9HAR2 1447 aa24.46■■□□□ 1.51
TSPAN9-204ENST00000444315 PIK3C2GO75747 1445 aa24.44■■□□□ 1.5
TSPAN9-204ENST00000444315 ROBO2Q9HCK4 1378 aa24.43■■□□□ 1.5
TSPAN9-204ENST00000444315 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
TSPAN9-204ENST00000444315 LAMC1P11047 1609 aa24.43■■□□□ 1.5
TSPAN9-204ENST00000444315 TMEM132EQ6IEE7 984 aa24.42■■□□□ 1.5
TSPAN9-204ENST00000444315 MYOM2P54296 1465 aa24.42■■□□□ 1.5
TSPAN9-204ENST00000444315 DCAF11Q8TEB1 546 aa24.4■■□□□ 1.5
TSPAN9-204ENST00000444315 KNDC1Q76NI1 1749 aa24.37■■□□□ 1.49
TSPAN9-204ENST00000444315 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
TSPAN9-204ENST00000444315 MST1RQ04912 1400 aa24.36■■□□□ 1.49
TSPAN9-204ENST00000444315 CFAP70Q5T0N1 1121 aa24.36■■□□□ 1.49
TSPAN9-204ENST00000444315 DHX57Q6P158 1386 aaKnown RBP24.36■■□□□ 1.49
TSPAN9-204ENST00000444315 ASXL1Q8IXJ9 1541 aa24.35■■□□□ 1.49
TSPAN9-204ENST00000444315 BRINP3Q76B58 766 aa24.35■■□□□ 1.49
TSPAN9-204ENST00000444315 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
TSPAN9-204ENST00000444315 JCADQ9P266 1359 aa24.33■■□□□ 1.49
TSPAN9-204ENST00000444315 AHDC1Q5TGY3 1603 aaPredicted RBP24.33■■□□□ 1.49
TSPAN9-204ENST00000444315 C14orf93Q9H972 538 aaKnown RBP24.33■■□□□ 1.49
TSPAN9-204ENST00000444315 COL16A1Q07092 1604 aaPredicted RBP24.32■■□□□ 1.48
TSPAN9-204ENST00000444315 WAPLQ7Z5K2 1190 aa24.32■■□□□ 1.48
TSPAN9-204ENST00000444315 PRAG1Q86YV5 1406 aa24.32■■□□□ 1.48
TSPAN9-204ENST00000444315 NRXN1Q9ULB1 1477 aa24.32■■□□□ 1.48
TSPAN9-204ENST00000444315 MEX3CQ5U5Q3 659 aaKnown RBP24.31■■□□□ 1.48
TSPAN9-204ENST00000444315 ILDR2Q71H61 639 aa24.3■■□□□ 1.48
TSPAN9-204ENST00000444315 POGKQ9P215 609 aa24.3■■□□□ 1.48
TSPAN9-204ENST00000444315 ABCC11Q96J66 1382 aa24.29■■□□□ 1.48
TSPAN9-204ENST00000444315 C1orf167Q5SNV9 1468 aa24.29■■□□□ 1.48
TSPAN9-204ENST00000444315 TECPR2O15040 1411 aa24.28■■□□□ 1.48
TSPAN9-204ENST00000444315 NUTM2FA1L443 756 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms