RNA–Protein interactions for RNA: ENST00000444131.2

TMED4-202, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 4

Gene TMED4, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-202ENST00000444131 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
TMED4-202ENST00000444131 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
TMED4-202ENST00000444131 NWD1Q149M9 1564 aa28.59■■■□□ 2.17
TMED4-202ENST00000444131 TMEM131LA2VDJ0 1609 aa28.59■■■□□ 2.17
TMED4-202ENST00000444131 BCANQ96GW7 911 aa28.59■■■□□ 2.17
TMED4-202ENST00000444131 PLEKHG1Q9ULL1 1385 aa28.59■■■□□ 2.17
TMED4-202ENST00000444131 E9PCH4 1651 aa28.58■■■□□ 2.16
TMED4-202ENST00000444131 PROSER2Q86WR7 435 aaPredicted RBP28.57■■■□□ 2.16
TMED4-202ENST00000444131 PPP1R15AO75807 674 aaPredicted RBP28.56■■■□□ 2.16
TMED4-202ENST00000444131 FAM135BQ49AJ0 1406 aa28.56■■■□□ 2.16
TMED4-202ENST00000444131 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.56■■■□□ 2.16
TMED4-202ENST00000444131 RIMS2Q9UQ26 1411 aa28.56■■■□□ 2.16
TMED4-202ENST00000444131 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
TMED4-202ENST00000444131 NUP155O75694 1391 aa28.52■■■□□ 2.16
TMED4-202ENST00000444131 CHD2O14647 1828 aaKnown RBP28.51■■■□□ 2.15
TMED4-202ENST00000444131 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
TMED4-202ENST00000444131 CHGAP10645 457 aaKnown RBP28.49■■■□□ 2.15
TMED4-202ENST00000444131 ITGAEP38570 1179 aa28.49■■■□□ 2.15
TMED4-202ENST00000444131 TBX22Q9Y458 520 aa28.48■■■□□ 2.15
TMED4-202ENST00000444131 MSH6P52701 1360 aa28.47■■■□□ 2.15
TMED4-202ENST00000444131 DIP2AQ14689 1571 aa28.45■■■□□ 2.15
TMED4-202ENST00000444131 NCOA3Q9Y6Q9 1424 aa28.43■■■□□ 2.14
TMED4-202ENST00000444131 ROBO1Q9Y6N7 1651 aa28.43■■■□□ 2.14
TMED4-202ENST00000444131 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
TMED4-202ENST00000444131 PPARGC1BQ86YN6 1023 aaKnown RBP28.4■■■□□ 2.14
TMED4-202ENST00000444131 RBM33Q96EV2 1170 aaKnown RBP28.4■■■□□ 2.14
TMED4-202ENST00000444131 ADAMTS13Q76LX8 1427 aa28.38■■■□□ 2.13
TMED4-202ENST00000444131 SPHKAPQ2M3C7 1700 aa28.38■■■□□ 2.13
TMED4-202ENST00000444131 SLAIN2Q9P270 581 aa28.37■■■□□ 2.13
TMED4-202ENST00000444131 RRBP1Q9P2E9 1410 aaKnown RBP28.36■■■□□ 2.13
TMED4-202ENST00000444131 TRPM2O94759 1503 aa28.34■■■□□ 2.13
TMED4-202ENST00000444131 NUTM2DQ5VT03 806 aaPredicted RBP28.33■■■□□ 2.13
TMED4-202ENST00000444131 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
TMED4-202ENST00000444131 C19orf44Q9H6X5 657 aa28.28■■■□□ 2.12
TMED4-202ENST00000444131 PHLPP1O60346 1717 aa28.28■■■□□ 2.12
TMED4-202ENST00000444131 CADPS2Q86UW7 1296 aa28.27■■■□□ 2.12
TMED4-202ENST00000444131 SETBP1Q9Y6X0 1596 aa28.26■■■□□ 2.11
TMED4-202ENST00000444131 AMOTL2Q9Y2J4 779 aa28.26■■■□□ 2.11
TMED4-202ENST00000444131 NAIPQ13075 1403 aa28.26■■■□□ 2.11
TMED4-202ENST00000444131 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.24■■■□□ 2.11
TMED4-202ENST00000444131 ATF3P18847 181 aa28.24■■■□□ 2.11
TMED4-202ENST00000444131 ZNF326Q5BKZ1 582 aaKnown RBP28.24■■■□□ 2.11
TMED4-202ENST00000444131 JCADQ9P266 1359 aa28.23■■■□□ 2.11
TMED4-202ENST00000444131 NRXN3Q9Y4C0 1643 aa28.22■■■□□ 2.11
TMED4-202ENST00000444131 RGS17Q9UGC6 210 aaPredicted RBP28.22■■■□□ 2.11
TMED4-202ENST00000444131 KIF1BO60333 1816 aa28.2■■■□□ 2.11
TMED4-202ENST00000444131 PTPRUQ92729 1446 aa28.2■■■□□ 2.11
TMED4-202ENST00000444131 CLTCL1P53675 1640 aa28.2■■■□□ 2.1
TMED4-202ENST00000444131 DCCP43146 1447 aa28.19■■■□□ 2.1
TMED4-202ENST00000444131 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
TMED4-202ENST00000444131 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
TMED4-202ENST00000444131 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
TMED4-202ENST00000444131 NEXMIFQ5QGS0 1516 aa28.16■■■□□ 2.1
TMED4-202ENST00000444131 AHDC1Q5TGY3 1603 aaPredicted RBP28.14■■■□□ 2.1
TMED4-202ENST00000444131 TRIM52Q96A61 297 aa28.12■■■□□ 2.09
TMED4-202ENST00000444131 SPATA31A6Q5VVP1 1343 aa28.12■■■□□ 2.09
TMED4-202ENST00000444131 METP08581 1390 aa28.11■■■□□ 2.09
TMED4-202ENST00000444131 VGFO15240 615 aaPredicted RBP28.08■■■□□ 2.09
TMED4-202ENST00000444131 POTEAQ6S8J7 498 aa28.07■■■□□ 2.08
TMED4-202ENST00000444131 SLC4A1APQ9BWU0 796 aaKnown RBP28.07■■■□□ 2.08
TMED4-202ENST00000444131 SHPRHQ149N8 1683 aa28.07■■■□□ 2.08
TMED4-202ENST00000444131 BRINP3Q76B58 766 aa28.06■■■□□ 2.08
TMED4-202ENST00000444131 RPGRIP1LQ68CZ1 1315 aa28.06■■■□□ 2.08
TMED4-202ENST00000444131 ADGRL3Q9HAR2 1447 aa28.04■■■□□ 2.08
TMED4-202ENST00000444131 MST1RQ04912 1400 aa28.02■■■□□ 2.08
TMED4-202ENST00000444131 ASXL1Q8IXJ9 1541 aa28.01■■■□□ 2.07
TMED4-202ENST00000444131 PTCH1Q13635 1447 aa27.99■■■□□ 2.07
TMED4-202ENST00000444131 MEX3CQ5U5Q3 659 aaKnown RBP27.98■■■□□ 2.07
TMED4-202ENST00000444131 LRP6O75581 1613 aa27.97■■■□□ 2.07
TMED4-202ENST00000444131 NHSL1Q5SYE7 1610 aa27.97■■■□□ 2.07
TMED4-202ENST00000444131 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
TMED4-202ENST00000444131 NALCNQ8IZF0 1738 aa27.97■■■□□ 2.07
TMED4-202ENST00000444131 PPLO60437 1756 aa27.96■■■□□ 2.07
TMED4-202ENST00000444131 PRAG1Q86YV5 1406 aa27.96■■■□□ 2.07
TMED4-202ENST00000444131 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
TMED4-202ENST00000444131 ZNF772Q68DY9 489 aaPredicted RBP27.96■■■□□ 2.07
TMED4-202ENST00000444131 LRRC59Q96AG4 307 aaKnown RBP27.93■■■□□ 2.06
TMED4-202ENST00000444131 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
TMED4-202ENST00000444131 CCDC144AA2RUR9 1427 aa27.9■■■□□ 2.06
TMED4-202ENST00000444131 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
TMED4-202ENST00000444131 C1orf167Q5SNV9 1468 aa27.86■■■□□ 2.05
TMED4-202ENST00000444131 LAMC1P11047 1609 aa27.85■■■□□ 2.05
TMED4-202ENST00000444131 NUTM2BA6NNL0 878 aaPredicted RBP27.84■■■□□ 2.05
TMED4-202ENST00000444131 NUTM2EB1AL46 878 aaPredicted RBP27.84■■■□□ 2.05
TMED4-202ENST00000444131 NUTM2AQ8IVF1 878 aaPredicted RBP27.84■■■□□ 2.05
TMED4-202ENST00000444131 MPHOSPH9Q99550 1183 aa27.84■■■□□ 2.05
TMED4-202ENST00000444131 ANKRD30BQ9BXX2 1392 aa27.84■■■□□ 2.05
TMED4-202ENST00000444131 FOXD1Q16676 465 aa27.83■■■□□ 2.05
TMED4-202ENST00000444131 SPATA31E1Q6ZUB1 1445 aa27.81■■■□□ 2.04
TMED4-202ENST00000444131 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
TMED4-202ENST00000444131 IFT172Q9UG01 1749 aa27.78■■■□□ 2.04
TMED4-202ENST00000444131 RXRBP28702 533 aa27.77■■■□□ 2.04
TMED4-202ENST00000444131 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
TMED4-202ENST00000444131 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
TMED4-202ENST00000444131 RGL3Q3MIN7 710 aa27.76■■■□□ 2.03
TMED4-202ENST00000444131 CDC42BPGQ6DT37 1551 aa27.76■■■□□ 2.03
TMED4-202ENST00000444131 CDK12Q9NYV4 1490 aaPredicted RBP27.76■■■□□ 2.03
TMED4-202ENST00000444131 AFF2P51816 1311 aa27.75■■■□□ 2.03
TMED4-202ENST00000444131 SOS2Q07890 1332 aaPredicted RBP27.75■■■□□ 2.03
TMED4-202ENST00000444131 TECPR2O15040 1411 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms