RNA–Protein interactions for RNA: ENST00000443981.5

PTPRN-207, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 1,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-207ENST00000443981 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
PTPRN-207ENST00000443981 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
PTPRN-207ENST00000443981 RIMS2Q9UQ26 1411 aa17.85■□□□□ 0.45
PTPRN-207ENST00000443981 KIF1BO60333 1816 aa17.84■□□□□ 0.45
PTPRN-207ENST00000443981 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
PTPRN-207ENST00000443981 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
PTPRN-207ENST00000443981 PLEKHG1Q9ULL1 1385 aa17.82■□□□□ 0.44
PTPRN-207ENST00000443981 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
PTPRN-207ENST00000443981 KCNA6P17658 529 aa17.81■□□□□ 0.44
PTPRN-207ENST00000443981 LRRC7Q96NW7 1537 aa17.81■□□□□ 0.44
PTPRN-207ENST00000443981 TRPM2O94759 1503 aa17.79■□□□□ 0.44
PTPRN-207ENST00000443981 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
PTPRN-207ENST00000443981 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
PTPRN-207ENST00000443981 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.44
PTPRN-207ENST00000443981 TBX22Q9Y458 520 aa17.77■□□□□ 0.44
PTPRN-207ENST00000443981 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
PTPRN-207ENST00000443981 NUTM2DQ5VT03 806 aaPredicted RBP17.76■□□□□ 0.43
PTPRN-207ENST00000443981 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
PTPRN-207ENST00000443981 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
PTPRN-207ENST00000443981 PROSER2Q86WR7 435 aaPredicted RBP17.75■□□□□ 0.43
PTPRN-207ENST00000443981 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
PTPRN-207ENST00000443981 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
PTPRN-207ENST00000443981 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
PTPRN-207ENST00000443981 NKTRP30414 1462 aaKnown RBP17.73■□□□□ 0.43
PTPRN-207ENST00000443981 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
PTPRN-207ENST00000443981 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
PTPRN-207ENST00000443981 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
PTPRN-207ENST00000443981 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
PTPRN-207ENST00000443981 ADAMTS13Q76LX8 1427 aa17.7■□□□□ 0.42
PTPRN-207ENST00000443981 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
PTPRN-207ENST00000443981 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
PTPRN-207ENST00000443981 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
PTPRN-207ENST00000443981 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 FOXD1Q16676 465 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 MSH6P52701 1360 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 RAB3GAP2Q9H2M9 1393 aa17.66■□□□□ 0.42
PTPRN-207ENST00000443981 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.42
PTPRN-207ENST00000443981 HSPA1LP34931 641 aa17.64■□□□□ 0.41
PTPRN-207ENST00000443981 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.41
PTPRN-207ENST00000443981 NRXN3Q9Y4C0 1643 aa17.64■□□□□ 0.41
PTPRN-207ENST00000443981 PPLO60437 1756 aa17.63■□□□□ 0.41
PTPRN-207ENST00000443981 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
PTPRN-207ENST00000443981 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
PTPRN-207ENST00000443981 HRCP23327 699 aa17.62■□□□□ 0.41
PTPRN-207ENST00000443981 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
PTPRN-207ENST00000443981 DISP3Q9P2K9 1392 aa17.59■□□□□ 0.41
PTPRN-207ENST00000443981 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
PTPRN-207ENST00000443981 PTPRUQ92729 1446 aa17.57■□□□□ 0.4
PTPRN-207ENST00000443981 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
PTPRN-207ENST00000443981 SLAIN2Q9P270 581 aa17.57■□□□□ 0.4
PTPRN-207ENST00000443981 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
PTPRN-207ENST00000443981 METP08581 1390 aa17.56■□□□□ 0.4
PTPRN-207ENST00000443981 ANKRD30BQ9BXX2 1392 aa17.56■□□□□ 0.4
PTPRN-207ENST00000443981 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.56■□□□□ 0.4
PTPRN-207ENST00000443981 ATF3P18847 181 aa17.56■□□□□ 0.4
PTPRN-207ENST00000443981 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
PTPRN-207ENST00000443981 ROBO1Q9Y6N7 1651 aa17.55■□□□□ 0.4
PTPRN-207ENST00000443981 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
PTPRN-207ENST00000443981 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
PTPRN-207ENST00000443981 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
PTPRN-207ENST00000443981 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
PTPRN-207ENST00000443981 DCCP43146 1447 aa17.5■□□□□ 0.39
PTPRN-207ENST00000443981 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
PTPRN-207ENST00000443981 PHLPP1O60346 1717 aa17.47■□□□□ 0.39
PTPRN-207ENST00000443981 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
PTPRN-207ENST00000443981 MED1Q15648 1581 aaPredicted RBP17.46■□□□□ 0.39
PTPRN-207ENST00000443981 ADGRL3Q9HAR2 1447 aa17.46■□□□□ 0.39
PTPRN-207ENST00000443981 SOCS7O14512 581 aa17.45■□□□□ 0.38
PTPRN-207ENST00000443981 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
PTPRN-207ENST00000443981 STAC3Q96MF2 364 aa17.44■□□□□ 0.38
PTPRN-207ENST00000443981 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
PTPRN-207ENST00000443981 PRAG1Q86YV5 1406 aa17.44■□□□□ 0.38
PTPRN-207ENST00000443981 MYOM2P54296 1465 aa17.43■□□□□ 0.38
PTPRN-207ENST00000443981 LAMC1P11047 1609 aa17.43■□□□□ 0.38
PTPRN-207ENST00000443981 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
PTPRN-207ENST00000443981 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
PTPRN-207ENST00000443981 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
PTPRN-207ENST00000443981 STK26Q9P289 416 aa17.4■□□□□ 0.38
PTPRN-207ENST00000443981 KNDC1Q76NI1 1749 aa17.4■□□□□ 0.38
PTPRN-207ENST00000443981 LRPPRCP42704 1394 aaKnown RBP17.4■□□□□ 0.38
PTPRN-207ENST00000443981 MST1RQ04912 1400 aa17.39■□□□□ 0.38
PTPRN-207ENST00000443981 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
PTPRN-207ENST00000443981 TMEM132EQ6IEE7 984 aa17.39■□□□□ 0.37
PTPRN-207ENST00000443981 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
PTPRN-207ENST00000443981 AHDC1Q5TGY3 1603 aaPredicted RBP17.39■□□□□ 0.37
PTPRN-207ENST00000443981 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
PTPRN-207ENST00000443981 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
PTPRN-207ENST00000443981 JCADQ9P266 1359 aa17.39■□□□□ 0.37
PTPRN-207ENST00000443981 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
PTPRN-207ENST00000443981 TECPR2O15040 1411 aa17.38■□□□□ 0.37
PTPRN-207ENST00000443981 COL16A1Q07092 1604 aaPredicted RBP17.37■□□□□ 0.37
PTPRN-207ENST00000443981 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
PTPRN-207ENST00000443981 YTHDC2Q9H6S0 1430 aaKnown RBP17.37■□□□□ 0.37
PTPRN-207ENST00000443981 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
PTPRN-207ENST00000443981 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
PTPRN-207ENST00000443981 ASXL1Q8IXJ9 1541 aa17.36■□□□□ 0.37
PTPRN-207ENST00000443981 C1orf167Q5SNV9 1468 aa17.34■□□□□ 0.37
PTPRN-207ENST00000443981 NHSL1Q5SYE7 1610 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms