RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 PLEKHG1Q9ULL1 1385 aa31.85■■■□□ 2.69
HNF4A-205ENST00000443598 ACIN1Q9UKV3 1341 aaKnown RBP31.83■■■□□ 2.69
HNF4A-205ENST00000443598 SLC4A1APQ9BWU0 796 aaKnown RBP31.82■■■□□ 2.69
HNF4A-205ENST00000443598 UBAP1LF5GYI3 381 aa31.82■■■□□ 2.68
HNF4A-205ENST00000443598 PPP1R15AO75807 674 aaPredicted RBP31.82■■■□□ 2.68
HNF4A-205ENST00000443598 LRRC7Q96NW7 1537 aa31.82■■■□□ 2.68
HNF4A-205ENST00000443598 SLC26A8Q96RN1 970 aa31.78■■■□□ 2.68
HNF4A-205ENST00000443598 CLTCL1P53675 1640 aa31.78■■■□□ 2.68
HNF4A-205ENST00000443598 BCANQ96GW7 911 aa31.76■■■□□ 2.67
HNF4A-205ENST00000443598 KIF1BO60333 1816 aa31.76■■■□□ 2.67
HNF4A-205ENST00000443598 KCNA6P17658 529 aa31.75■■■□□ 2.67
HNF4A-205ENST00000443598 SETD5Q9C0A6 1442 aa31.75■■■□□ 2.67
HNF4A-205ENST00000443598 TOM1O60784 492 aa31.75■■■□□ 2.67
HNF4A-205ENST00000443598 NWD1Q149M9 1564 aa31.72■■■□□ 2.67
HNF4A-205ENST00000443598 TBX22Q9Y458 520 aa31.71■■■□□ 2.67
HNF4A-205ENST00000443598 DIP2AQ14689 1571 aa31.7■■■□□ 2.67
HNF4A-205ENST00000443598 CHD2O14647 1828 aaKnown RBP31.69■■■□□ 2.66
HNF4A-205ENST00000443598 XIRP1Q702N8 1843 aaKnown RBP31.69■■■□□ 2.66
HNF4A-205ENST00000443598 NKTRP30414 1462 aaKnown RBP31.68■■■□□ 2.66
HNF4A-205ENST00000443598 ADAMTS13Q76LX8 1427 aa31.68■■■□□ 2.66
HNF4A-205ENST00000443598 ZNF326Q5BKZ1 582 aaKnown RBP31.67■■■□□ 2.66
HNF4A-205ENST00000443598 NUTM2DQ5VT03 806 aaPredicted RBP31.67■■■□□ 2.66
HNF4A-205ENST00000443598 MPHOSPH9Q99550 1183 aa31.67■■■□□ 2.66
HNF4A-205ENST00000443598 ALKQ9UM73 1620 aa31.64■■■□□ 2.66
HNF4A-205ENST00000443598 PIK3R4Q99570 1358 aa31.63■■■□□ 2.65
HNF4A-205ENST00000443598 NEXMIFQ5QGS0 1516 aa31.63■■■□□ 2.65
HNF4A-205ENST00000443598 RAB3GAP2Q9H2M9 1393 aa31.61■■■□□ 2.65
HNF4A-205ENST00000443598 SENP3Q9H4L4 574 aaPredicted RBP31.61■■■□□ 2.65
HNF4A-205ENST00000443598 SETBP1Q9Y6X0 1596 aa31.61■■■□□ 2.65
HNF4A-205ENST00000443598 TMEM94Q12767 1356 aa31.6■■■□□ 2.65
HNF4A-205ENST00000443598 PROSER2Q86WR7 435 aaPredicted RBP31.6■■■□□ 2.65
HNF4A-205ENST00000443598 FOXD1Q16676 465 aa31.59■■■□□ 2.65
HNF4A-205ENST00000443598 NRXN3Q9Y4C0 1643 aa31.58■■■□□ 2.65
HNF4A-205ENST00000443598 RPGRIP1LQ68CZ1 1315 aa31.57■■■□□ 2.65
HNF4A-205ENST00000443598 PIP4K2BP78356 416 aa31.57■■■□□ 2.64
HNF4A-205ENST00000443598 CCDC144AA2RUR9 1427 aa31.56■■■□□ 2.64
HNF4A-205ENST00000443598 SCAF1Q9H7N4 1312 aaKnown RBP31.55■■■□□ 2.64
HNF4A-205ENST00000443598 HRCP23327 699 aa31.53■■■□□ 2.64
HNF4A-205ENST00000443598 VGFO15240 615 aaPredicted RBP31.52■■■□□ 2.64
HNF4A-205ENST00000443598 NCOA3Q9Y6Q9 1424 aa31.51■■■□□ 2.63
HNF4A-205ENST00000443598 PPLO60437 1756 aa31.5■■■□□ 2.63
HNF4A-205ENST00000443598 SPATA31E1Q6ZUB1 1445 aa31.46■■■□□ 2.63
HNF4A-205ENST00000443598 PTPRUQ92729 1446 aa31.46■■■□□ 2.63
HNF4A-205ENST00000443598 AMOTL2Q9Y2J4 779 aa31.46■■■□□ 2.63
HNF4A-205ENST00000443598 MSH6P52701 1360 aa31.45■■■□□ 2.63
HNF4A-205ENST00000443598 RBM33Q96EV2 1170 aaKnown RBP31.45■■■□□ 2.62
HNF4A-205ENST00000443598 HSPA1LP34931 641 aa31.44■■■□□ 2.62
HNF4A-205ENST00000443598 XRN1Q8IZH2 1706 aaKnown RBP31.44■■■□□ 2.62
HNF4A-205ENST00000443598 METP08581 1390 aa31.42■■■□□ 2.62
HNF4A-205ENST00000443598 FAM135BQ49AJ0 1406 aa31.39■■■□□ 2.62
HNF4A-205ENST00000443598 SETD1AO15047 1707 aaKnown RBP31.39■■■□□ 2.61
HNF4A-205ENST00000443598 IFT172Q9UG01 1749 aa31.38■■■□□ 2.61
HNF4A-205ENST00000443598 ANKRD30BQ9BXX2 1392 aa31.37■■■□□ 2.61
HNF4A-205ENST00000443598 RGL3Q3MIN7 710 aa31.35■■■□□ 2.61
HNF4A-205ENST00000443598 C19orf44Q9H6X5 657 aa31.34■■■□□ 2.61
HNF4A-205ENST00000443598 C14orf37Q86TY3 774 aa31.32■■■□□ 2.6
HNF4A-205ENST00000443598 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
HNF4A-205ENST00000443598 SLAIN2Q9P270 581 aa31.31■■■□□ 2.6
HNF4A-205ENST00000443598 ROBO1Q9Y6N7 1651 aa31.3■■■□□ 2.6
HNF4A-205ENST00000443598 ADGRF5Q8IZF2 1346 aa31.29■■■□□ 2.6
HNF4A-205ENST00000443598 CADPS2Q86UW7 1296 aa31.28■■■□□ 2.6
HNF4A-205ENST00000443598 PRAG1Q86YV5 1406 aa31.28■■■□□ 2.6
HNF4A-205ENST00000443598 DCCP43146 1447 aa31.27■■■□□ 2.6
HNF4A-205ENST00000443598 PTCH1Q13635 1447 aa31.25■■■□□ 2.59
HNF4A-205ENST00000443598 ATF3P18847 181 aa31.24■■■□□ 2.59
HNF4A-205ENST00000443598 DISP3Q9P2K9 1392 aa31.23■■■□□ 2.59
HNF4A-205ENST00000443598 PIK3C2GO75747 1445 aa31.23■■■□□ 2.59
HNF4A-205ENST00000443598 MYOM2P54296 1465 aa31.21■■■□□ 2.59
HNF4A-205ENST00000443598 ADGRL3Q9HAR2 1447 aa31.2■■■□□ 2.58
HNF4A-205ENST00000443598 NRXN1Q9ULB1 1477 aa31.18■■■□□ 2.58
HNF4A-205ENST00000443598 ROBO2Q9HCK4 1378 aa31.17■■■□□ 2.58
HNF4A-205ENST00000443598 NALCNQ8IZF0 1738 aa31.16■■■□□ 2.58
HNF4A-205ENST00000443598 MED1Q15648 1581 aaPredicted RBP31.13■■■□□ 2.57
HNF4A-205ENST00000443598 TECPR2O15040 1411 aa31.12■■■□□ 2.57
HNF4A-205ENST00000443598 LAMC1P11047 1609 aa31.12■■■□□ 2.57
HNF4A-205ENST00000443598 PHLPP1O60346 1717 aa31.11■■■□□ 2.57
HNF4A-205ENST00000443598 STAC3Q96MF2 364 aa31.11■■■□□ 2.57
HNF4A-205ENST00000443598 C14orf93Q9H972 538 aaKnown RBP31.11■■■□□ 2.57
HNF4A-205ENST00000443598 LRPPRCP42704 1394 aaKnown RBP31.1■■■□□ 2.57
HNF4A-205ENST00000443598 ASXL1Q8IXJ9 1541 aa31.1■■■□□ 2.57
HNF4A-205ENST00000443598 KNDC1Q76NI1 1749 aa31.1■■■□□ 2.57
HNF4A-205ENST00000443598 ABCC11Q96J66 1382 aa31.1■■■□□ 2.57
HNF4A-205ENST00000443598 MST1RQ04912 1400 aa31.09■■■□□ 2.57
HNF4A-205ENST00000443598 AHDC1Q5TGY3 1603 aaPredicted RBP31.06■■■□□ 2.56
HNF4A-205ENST00000443598 TMEM132EQ6IEE7 984 aa31.05■■■□□ 2.56
HNF4A-205ENST00000443598 YTHDC2Q9H6S0 1430 aaKnown RBP31.04■■■□□ 2.56
HNF4A-205ENST00000443598 BRINP3Q76B58 766 aa31.04■■■□□ 2.56
HNF4A-205ENST00000443598 COL16A1Q07092 1604 aaPredicted RBP31.03■■■□□ 2.56
HNF4A-205ENST00000443598 STK26Q9P289 416 aa31.02■■■□□ 2.56
HNF4A-205ENST00000443598 CFAP70Q5T0N1 1121 aa31.02■■■□□ 2.56
HNF4A-205ENST00000443598 DCAF11Q8TEB1 546 aa31.01■■■□□ 2.55
HNF4A-205ENST00000443598 SIRT1Q96EB6 747 aa31.01■■■□□ 2.55
HNF4A-205ENST00000443598 DHX57Q6P158 1386 aaKnown RBP31■■■□□ 2.55
HNF4A-205ENST00000443598 JCADQ9P266 1359 aa30.98■■■□□ 2.55
HNF4A-205ENST00000443598 CDC42BPGQ6DT37 1551 aa30.98■■■□□ 2.55
HNF4A-205ENST00000443598 C1orf167Q5SNV9 1468 aa30.97■■■□□ 2.55
HNF4A-205ENST00000443598 KDM2AQ9Y2K7 1162 aa30.96■■■□□ 2.55
HNF4A-205ENST00000443598 NHSL1Q5SYE7 1610 aa30.96■■■□□ 2.55
HNF4A-205ENST00000443598 WAPLQ7Z5K2 1190 aa30.95■■■□□ 2.54
HNF4A-205ENST00000443598 ILDR2Q71H61 639 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms