RNA–Protein interactions for RNA: ENST00000442387.2

GACAT3-202, gastric cancer associated transcript 3, humanhuman

TSL 3

Gene GACAT3, Length 472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-202ENST00000442387 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
GACAT3-202ENST00000442387 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
GACAT3-202ENST00000442387 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
GACAT3-202ENST00000442387 MSH6P52701 1360 aa17.02■□□□□ 0.31
GACAT3-202ENST00000442387 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
GACAT3-202ENST00000442387 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
GACAT3-202ENST00000442387 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
GACAT3-202ENST00000442387 PLEKHG1Q9ULL1 1385 aa17.01■□□□□ 0.31
GACAT3-202ENST00000442387 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
GACAT3-202ENST00000442387 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
GACAT3-202ENST00000442387 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
GACAT3-202ENST00000442387 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
GACAT3-202ENST00000442387 POTEAQ6S8J7 498 aa16.95■□□□□ 0.3
GACAT3-202ENST00000442387 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.95■□□□□ 0.3
GACAT3-202ENST00000442387 TBX22Q9Y458 520 aa16.95■□□□□ 0.3
GACAT3-202ENST00000442387 TMEM131LA2VDJ0 1609 aa16.95■□□□□ 0.3
GACAT3-202ENST00000442387 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
GACAT3-202ENST00000442387 UNC13BO14795 1591 aa16.94■□□□□ 0.3
GACAT3-202ENST00000442387 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
GACAT3-202ENST00000442387 JCADQ9P266 1359 aa16.92■□□□□ 0.3
GACAT3-202ENST00000442387 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
GACAT3-202ENST00000442387 NUTM2DQ5VT03 806 aaPredicted RBP16.91■□□□□ 0.3
GACAT3-202ENST00000442387 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
GACAT3-202ENST00000442387 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
GACAT3-202ENST00000442387 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
GACAT3-202ENST00000442387 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
GACAT3-202ENST00000442387 MYO5BQ9ULV0 1848 aa16.89■□□□□ 0.29
GACAT3-202ENST00000442387 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
GACAT3-202ENST00000442387 PIK3R4Q99570 1358 aa16.89■□□□□ 0.29
GACAT3-202ENST00000442387 E9PCH4 1651 aa16.88■□□□□ 0.29
GACAT3-202ENST00000442387 CADPS2Q86UW7 1296 aa16.87■□□□□ 0.29
GACAT3-202ENST00000442387 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
GACAT3-202ENST00000442387 NUP155O75694 1391 aa16.87■□□□□ 0.29
GACAT3-202ENST00000442387 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
GACAT3-202ENST00000442387 ATF3P18847 181 aa16.86■□□□□ 0.29
GACAT3-202ENST00000442387 C19orf44Q9H6X5 657 aa16.86■□□□□ 0.29
GACAT3-202ENST00000442387 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
GACAT3-202ENST00000442387 SPATA31A6Q5VVP1 1343 aa16.84■□□□□ 0.29
GACAT3-202ENST00000442387 TRPM2O94759 1503 aa16.84■□□□□ 0.29
GACAT3-202ENST00000442387 ITGAEP38570 1179 aa16.83■□□□□ 0.28
GACAT3-202ENST00000442387 MEX3CQ5U5Q3 659 aaKnown RBP16.82■□□□□ 0.28
GACAT3-202ENST00000442387 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
GACAT3-202ENST00000442387 LRP6O75581 1613 aa16.81■□□□□ 0.28
GACAT3-202ENST00000442387 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
GACAT3-202ENST00000442387 PTPRUQ92729 1446 aa16.81■□□□□ 0.28
GACAT3-202ENST00000442387 DCCP43146 1447 aa16.79■□□□□ 0.28
GACAT3-202ENST00000442387 ZNF772Q68DY9 489 aaPredicted RBP16.78■□□□□ 0.28
GACAT3-202ENST00000442387 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
GACAT3-202ENST00000442387 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
GACAT3-202ENST00000442387 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
GACAT3-202ENST00000442387 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
GACAT3-202ENST00000442387 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
GACAT3-202ENST00000442387 NRXN3Q9Y4C0 1643 aa16.74■□□□□ 0.27
GACAT3-202ENST00000442387 XRN1Q8IZH2 1706 aaKnown RBP16.74■□□□□ 0.27
GACAT3-202ENST00000442387 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
GACAT3-202ENST00000442387 METP08581 1390 aa16.74■□□□□ 0.27
GACAT3-202ENST00000442387 MST1RQ04912 1400 aa16.73■□□□□ 0.27
GACAT3-202ENST00000442387 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
GACAT3-202ENST00000442387 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
GACAT3-202ENST00000442387 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
GACAT3-202ENST00000442387 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
GACAT3-202ENST00000442387 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
GACAT3-202ENST00000442387 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
GACAT3-202ENST00000442387 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
GACAT3-202ENST00000442387 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
GACAT3-202ENST00000442387 RXRBP28702 533 aa16.69■□□□□ 0.26
GACAT3-202ENST00000442387 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
GACAT3-202ENST00000442387 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
GACAT3-202ENST00000442387 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
GACAT3-202ENST00000442387 CLTCL1P53675 1640 aa16.67■□□□□ 0.26
GACAT3-202ENST00000442387 AFF2P51816 1311 aa16.67■□□□□ 0.26
GACAT3-202ENST00000442387 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
GACAT3-202ENST00000442387 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
GACAT3-202ENST00000442387 CDK12Q9NYV4 1490 aaPredicted RBP16.65■□□□□ 0.26
GACAT3-202ENST00000442387 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.25
GACAT3-202ENST00000442387 NAIPQ13075 1403 aa16.63■□□□□ 0.25
GACAT3-202ENST00000442387 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
GACAT3-202ENST00000442387 VGFO15240 615 aaPredicted RBP16.63■□□□□ 0.25
GACAT3-202ENST00000442387 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
GACAT3-202ENST00000442387 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
GACAT3-202ENST00000442387 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
GACAT3-202ENST00000442387 C1orf167Q5SNV9 1468 aa16.62■□□□□ 0.25
GACAT3-202ENST00000442387 QTRT2Q9H974 415 aaKnown RBP16.6■□□□□ 0.25
GACAT3-202ENST00000442387 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
GACAT3-202ENST00000442387 RPGRIP1LQ68CZ1 1315 aa16.59■□□□□ 0.25
GACAT3-202ENST00000442387 ROBO2Q9HCK4 1378 aa16.59■□□□□ 0.25
GACAT3-202ENST00000442387 KIF1BO60333 1816 aa16.59■□□□□ 0.25
GACAT3-202ENST00000442387 RGS12O14924 1447 aa16.57■□□□□ 0.24
GACAT3-202ENST00000442387 PRAG1Q86YV5 1406 aa16.57■□□□□ 0.24
GACAT3-202ENST00000442387 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
GACAT3-202ENST00000442387 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
GACAT3-202ENST00000442387 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
GACAT3-202ENST00000442387 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
GACAT3-202ENST00000442387 SLC4A1APQ9BWU0 796 aaKnown RBP16.56■□□□□ 0.24
GACAT3-202ENST00000442387 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
GACAT3-202ENST00000442387 LAMC1P11047 1609 aa16.55■□□□□ 0.24
GACAT3-202ENST00000442387 USP21Q9UK80 565 aa16.52■□□□□ 0.24
GACAT3-202ENST00000442387 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
GACAT3-202ENST00000442387 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
GACAT3-202ENST00000442387 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms