RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.23■■□□□ 1.15
CSNK1E-210ENST00000442216 FOXD1Q16676 465 aa22.22■■□□□ 1.15
CSNK1E-210ENST00000442216 LTBP4Q8N2S1 1624 aa22.21■■□□□ 1.15
CSNK1E-210ENST00000442216 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
CSNK1E-210ENST00000442216 PLEKHG1Q9ULL1 1385 aa22.18■■□□□ 1.14
CSNK1E-210ENST00000442216 ZNF335Q9H4Z2 1342 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-210ENST00000442216 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
CSNK1E-210ENST00000442216 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
CSNK1E-210ENST00000442216 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-210ENST00000442216 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
CSNK1E-210ENST00000442216 CERKQ8TCT0 537 aa22.14■■□□□ 1.13
CSNK1E-210ENST00000442216 CPS1P31327 1500 aa22.14■■□□□ 1.13
CSNK1E-210ENST00000442216 PPLO60437 1756 aa22.14■■□□□ 1.13
CSNK1E-210ENST00000442216 IQSEC2Q5JU85 1478 aa22.13■■□□□ 1.13
CSNK1E-210ENST00000442216 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
CSNK1E-210ENST00000442216 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
CSNK1E-210ENST00000442216 STRCP1A6NGW2 1772 aa22.11■■□□□ 1.13
CSNK1E-210ENST00000442216 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
CSNK1E-210ENST00000442216 IFT172Q9UG01 1749 aa22.09■■□□□ 1.13
CSNK1E-210ENST00000442216 SETBP1Q9Y6X0 1596 aa22.09■■□□□ 1.13
CSNK1E-210ENST00000442216 BCANQ96GW7 911 aa22.08■■□□□ 1.13
CSNK1E-210ENST00000442216 TBX22Q9Y458 520 aa22.08■■□□□ 1.13
CSNK1E-210ENST00000442216 CHD2O14647 1828 aaKnown RBP22.08■■□□□ 1.12
CSNK1E-210ENST00000442216 NRXN3Q9Y4C0 1643 aa22.07■■□□□ 1.12
CSNK1E-210ENST00000442216 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
CSNK1E-210ENST00000442216 NUTM2DQ5VT03 806 aaPredicted RBP22.07■■□□□ 1.12
CSNK1E-210ENST00000442216 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
CSNK1E-210ENST00000442216 SLC26A8Q96RN1 970 aa22.06■■□□□ 1.12
CSNK1E-210ENST00000442216 NWD1Q149M9 1564 aa22.05■■□□□ 1.12
CSNK1E-210ENST00000442216 PIK3R4Q99570 1358 aa22.04■■□□□ 1.12
CSNK1E-210ENST00000442216 KCNA6P17658 529 aa22.03■■□□□ 1.12
CSNK1E-210ENST00000442216 RGL3Q3MIN7 710 aa22■■□□□ 1.11
CSNK1E-210ENST00000442216 FBXO41Q8TF61 875 aa22■■□□□ 1.11
CSNK1E-210ENST00000442216 NKTRP30414 1462 aaKnown RBP22■■□□□ 1.11
CSNK1E-210ENST00000442216 LRRC7Q96NW7 1537 aa21.99■■□□□ 1.11
CSNK1E-210ENST00000442216 SETD1AO15047 1707 aaKnown RBP21.98■■□□□ 1.11
CSNK1E-210ENST00000442216 XIRP1Q702N8 1843 aaKnown RBP21.98■■□□□ 1.11
CSNK1E-210ENST00000442216 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
CSNK1E-210ENST00000442216 MYOM2P54296 1465 aa21.96■■□□□ 1.11
CSNK1E-210ENST00000442216 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
CSNK1E-210ENST00000442216 STAC3Q96MF2 364 aa21.94■■□□□ 1.1
CSNK1E-210ENST00000442216 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
CSNK1E-210ENST00000442216 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
CSNK1E-210ENST00000442216 NRXN1Q9ULB1 1477 aa21.92■■□□□ 1.1
CSNK1E-210ENST00000442216 ADGRF5Q8IZF2 1346 aa21.92■■□□□ 1.1
CSNK1E-210ENST00000442216 PIK3C2GO75747 1445 aa21.91■■□□□ 1.1
CSNK1E-210ENST00000442216 PTPRUQ92729 1446 aa21.9■■□□□ 1.1
CSNK1E-210ENST00000442216 METP08581 1390 aa21.9■■□□□ 1.1
CSNK1E-210ENST00000442216 LAMC1P11047 1609 aa21.9■■□□□ 1.1
CSNK1E-210ENST00000442216 NCOA3Q9Y6Q9 1424 aa21.89■■□□□ 1.1
CSNK1E-210ENST00000442216 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
CSNK1E-210ENST00000442216 ILDR1Q86SU0 546 aaPredicted RBP21.88■■□□□ 1.09
CSNK1E-210ENST00000442216 AMOTL2Q9Y2J4 779 aa21.88■■□□□ 1.09
CSNK1E-210ENST00000442216 TMEM94Q12767 1356 aa21.87■■□□□ 1.09
CSNK1E-210ENST00000442216 PRAG1Q86YV5 1406 aa21.86■■□□□ 1.09
CSNK1E-210ENST00000442216 TOM1O60784 492 aa21.85■■□□□ 1.09
CSNK1E-210ENST00000442216 UBAP1LF5GYI3 381 aa21.84■■□□□ 1.09
CSNK1E-210ENST00000442216 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
CSNK1E-210ENST00000442216 PCGF6Q9BYE7 350 aa21.84■■□□□ 1.09
CSNK1E-210ENST00000442216 C14orf93Q9H972 538 aaKnown RBP21.82■■□□□ 1.08
CSNK1E-210ENST00000442216 KNDC1Q76NI1 1749 aa21.81■■□□□ 1.08
CSNK1E-210ENST00000442216 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
CSNK1E-210ENST00000442216 MSH6P52701 1360 aa21.79■■□□□ 1.08
CSNK1E-210ENST00000442216 ASXL1Q8IXJ9 1541 aa21.79■■□□□ 1.08
CSNK1E-210ENST00000442216 SIN3AQ96ST3 1273 aa21.78■■□□□ 1.08
CSNK1E-210ENST00000442216 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
CSNK1E-210ENST00000442216 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.77■■□□□ 1.08
CSNK1E-210ENST00000442216 KIAA1210Q9ULL0 1709 aa21.77■■□□□ 1.08
CSNK1E-210ENST00000442216 TECPR2O15040 1411 aa21.77■■□□□ 1.08
CSNK1E-210ENST00000442216 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
CSNK1E-210ENST00000442216 RBM33Q96EV2 1170 aaKnown RBP21.76■■□□□ 1.07
CSNK1E-210ENST00000442216 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
CSNK1E-210ENST00000442216 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
CSNK1E-210ENST00000442216 YTHDC2Q9H6S0 1430 aaKnown RBP21.74■■□□□ 1.07
CSNK1E-210ENST00000442216 C19orf44Q9H6X5 657 aa21.74■■□□□ 1.07
CSNK1E-210ENST00000442216 DCCP43146 1447 aa21.73■■□□□ 1.07
CSNK1E-210ENST00000442216 ROBO2Q9HCK4 1378 aa21.73■■□□□ 1.07
CSNK1E-210ENST00000442216 NALCNQ8IZF0 1738 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 TMEM132EQ6IEE7 984 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 ADGRB1O14514 1584 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 ADGRL3Q9HAR2 1447 aa21.72■■□□□ 1.07
CSNK1E-210ENST00000442216 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
CSNK1E-210ENST00000442216 CADPS2Q86UW7 1296 aa21.7■■□□□ 1.06
CSNK1E-210ENST00000442216 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
CSNK1E-210ENST00000442216 FAM135BQ49AJ0 1406 aa21.69■■□□□ 1.06
CSNK1E-210ENST00000442216 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
CSNK1E-210ENST00000442216 PIP4K2BP78356 416 aa21.68■■□□□ 1.06
CSNK1E-210ENST00000442216 ATF3P18847 181 aa21.67■■□□□ 1.06
CSNK1E-210ENST00000442216 STK26Q9P289 416 aa21.67■■□□□ 1.06
CSNK1E-210ENST00000442216 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
CSNK1E-210ENST00000442216 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
CSNK1E-210ENST00000442216 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
CSNK1E-210ENST00000442216 TONSLQ96HA7 1378 aa21.63■■□□□ 1.05
CSNK1E-210ENST00000442216 TRPM1Q7Z4N2 1603 aa21.62■■□□□ 1.05
CSNK1E-210ENST00000442216 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
CSNK1E-210ENST00000442216 ARHGEF28Q8N1W1 1705 aaKnown RBP21.61■■□□□ 1.05
CSNK1E-210ENST00000442216 WAPLQ7Z5K2 1190 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms