RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 HDGFP51858 240 aaKnown RBP21.91■■□□□ 1.1
PTPRN-206ENST00000442029 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
PTPRN-206ENST00000442029 RIMS2Q9UQ26 1411 aa21.88■■□□□ 1.09
PTPRN-206ENST00000442029 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
PTPRN-206ENST00000442029 ZFYVE9O95405 1425 aa21.86■■□□□ 1.09
PTPRN-206ENST00000442029 ALKQ9UM73 1620 aa21.85■■□□□ 1.09
PTPRN-206ENST00000442029 CHD2O14647 1828 aaKnown RBP21.85■■□□□ 1.09
PTPRN-206ENST00000442029 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
PTPRN-206ENST00000442029 PLEKHG1Q9ULL1 1385 aa21.84■■□□□ 1.09
PTPRN-206ENST00000442029 KCNA6P17658 529 aa21.83■■□□□ 1.09
PTPRN-206ENST00000442029 HSPA1LP34931 641 aa21.83■■□□□ 1.09
PTPRN-206ENST00000442029 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
PTPRN-206ENST00000442029 NWD1Q149M9 1564 aa21.82■■□□□ 1.08
PTPRN-206ENST00000442029 NAIPQ13075 1403 aa21.82■■□□□ 1.08
PTPRN-206ENST00000442029 KIF1BO60333 1816 aa21.81■■□□□ 1.08
PTPRN-206ENST00000442029 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
PTPRN-206ENST00000442029 PROSER2Q86WR7 435 aaPredicted RBP21.79■■□□□ 1.08
PTPRN-206ENST00000442029 TMEM94Q12767 1356 aa21.78■■□□□ 1.08
PTPRN-206ENST00000442029 NUTM2DQ5VT03 806 aaPredicted RBP21.78■■□□□ 1.08
PTPRN-206ENST00000442029 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
PTPRN-206ENST00000442029 TRIM52Q96A61 297 aa21.77■■□□□ 1.08
PTPRN-206ENST00000442029 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
PTPRN-206ENST00000442029 CLTCL1P53675 1640 aa21.74■■□□□ 1.07
PTPRN-206ENST00000442029 TRPM2O94759 1503 aa21.74■■□□□ 1.07
PTPRN-206ENST00000442029 ZNF326Q5BKZ1 582 aaKnown RBP21.73■■□□□ 1.07
PTPRN-206ENST00000442029 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
PTPRN-206ENST00000442029 MED1Q15648 1581 aaPredicted RBP21.71■■□□□ 1.07
PTPRN-206ENST00000442029 RBM33Q96EV2 1170 aaKnown RBP21.71■■□□□ 1.07
PTPRN-206ENST00000442029 MSH6P52701 1360 aa21.71■■□□□ 1.07
PTPRN-206ENST00000442029 ADAMTS13Q76LX8 1427 aa21.7■■□□□ 1.06
PTPRN-206ENST00000442029 ROBO1Q9Y6N7 1651 aa21.69■■□□□ 1.06
PTPRN-206ENST00000442029 ILDR2Q71H61 639 aa21.68■■□□□ 1.06
PTPRN-206ENST00000442029 PIK3R4Q99570 1358 aa21.68■■□□□ 1.06
PTPRN-206ENST00000442029 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
PTPRN-206ENST00000442029 C14orf37Q86TY3 774 aa21.66■■□□□ 1.06
PTPRN-206ENST00000442029 NRXN3Q9Y4C0 1643 aa21.66■■□□□ 1.06
PTPRN-206ENST00000442029 FAM135BQ49AJ0 1406 aa21.65■■□□□ 1.06
PTPRN-206ENST00000442029 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
PTPRN-206ENST00000442029 NEXMIFQ5QGS0 1516 aa21.64■■□□□ 1.05
PTPRN-206ENST00000442029 NCOA3Q9Y6Q9 1424 aa21.62■■□□□ 1.05
PTPRN-206ENST00000442029 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
PTPRN-206ENST00000442029 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
PTPRN-206ENST00000442029 PHLPP1O60346 1717 aa21.6■■□□□ 1.05
PTPRN-206ENST00000442029 XRN1Q8IZH2 1706 aaKnown RBP21.59■■□□□ 1.05
PTPRN-206ENST00000442029 AMOTL2Q9Y2J4 779 aa21.59■■□□□ 1.05
PTPRN-206ENST00000442029 PPLO60437 1756 aa21.59■■□□□ 1.05
PTPRN-206ENST00000442029 SLAIN2Q9P270 581 aa21.57■■□□□ 1.04
PTPRN-206ENST00000442029 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
PTPRN-206ENST00000442029 SOCS7O14512 581 aa21.55■■□□□ 1.04
PTPRN-206ENST00000442029 ATF3P18847 181 aa21.54■■□□□ 1.04
PTPRN-206ENST00000442029 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
PTPRN-206ENST00000442029 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
PTPRN-206ENST00000442029 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
PTPRN-206ENST00000442029 FOXD1Q16676 465 aa21.52■■□□□ 1.04
PTPRN-206ENST00000442029 CCDC144AA2RUR9 1427 aa21.52■■□□□ 1.04
PTPRN-206ENST00000442029 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.03
PTPRN-206ENST00000442029 ACIN1Q9UKV3 1341 aaKnown RBP21.52■■□□□ 1.03
PTPRN-206ENST00000442029 METP08581 1390 aa21.51■■□□□ 1.03
PTPRN-206ENST00000442029 MPHOSPH9Q99550 1183 aa21.51■■□□□ 1.03
PTPRN-206ENST00000442029 SETD1AO15047 1707 aaKnown RBP21.51■■□□□ 1.03
PTPRN-206ENST00000442029 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
PTPRN-206ENST00000442029 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
PTPRN-206ENST00000442029 DCCP43146 1447 aa21.46■■□□□ 1.03
PTPRN-206ENST00000442029 NALCNQ8IZF0 1738 aa21.46■■□□□ 1.03
PTPRN-206ENST00000442029 COL16A1Q07092 1604 aaPredicted RBP21.45■■□□□ 1.02
PTPRN-206ENST00000442029 AHDC1Q5TGY3 1603 aaPredicted RBP21.43■■□□□ 1.02
PTPRN-206ENST00000442029 RGL3Q3MIN7 710 aa21.42■■□□□ 1.02
PTPRN-206ENST00000442029 ADGRL3Q9HAR2 1447 aa21.42■■□□□ 1.02
PTPRN-206ENST00000442029 JCADQ9P266 1359 aa21.42■■□□□ 1.02
PTPRN-206ENST00000442029 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
PTPRN-206ENST00000442029 RAB3GAP2Q9H2M9 1393 aa21.39■■□□□ 1.02
PTPRN-206ENST00000442029 SHPRHQ149N8 1683 aa21.39■■□□□ 1.01
PTPRN-206ENST00000442029 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
PTPRN-206ENST00000442029 ASXL1Q8IXJ9 1541 aa21.38■■□□□ 1.01
PTPRN-206ENST00000442029 MST1RQ04912 1400 aa21.38■■□□□ 1.01
PTPRN-206ENST00000442029 ANKRD30BQ9BXX2 1392 aa21.37■■□□□ 1.01
PTPRN-206ENST00000442029 NHSL1Q5SYE7 1610 aa21.37■■□□□ 1.01
PTPRN-206ENST00000442029 BRINP3Q76B58 766 aa21.37■■□□□ 1.01
PTPRN-206ENST00000442029 ADGRF5Q8IZF2 1346 aa21.35■■□□□ 1.01
PTPRN-206ENST00000442029 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
PTPRN-206ENST00000442029 PRAG1Q86YV5 1406 aa21.34■■□□□ 1.01
PTPRN-206ENST00000442029 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
PTPRN-206ENST00000442029 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
PTPRN-206ENST00000442029 RGS17Q9UGC6 210 aaPredicted RBP21.31■■□□□ 1
PTPRN-206ENST00000442029 MEX3CQ5U5Q3 659 aaKnown RBP21.3■■□□□ 1
PTPRN-206ENST00000442029 LAMC1P11047 1609 aa21.29■■□□□ 1
PTPRN-206ENST00000442029 PIK3C2GO75747 1445 aa21.29■■□□□ 1
PTPRN-206ENST00000442029 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
PTPRN-206ENST00000442029 STK26Q9P289 416 aa21.28■■□□□ 1
PTPRN-206ENST00000442029 CDC42BPGQ6DT37 1551 aa21.26■□□□□ 0.99
PTPRN-206ENST00000442029 LRP6O75581 1613 aa21.26■□□□□ 0.99
PTPRN-206ENST00000442029 LRPPRCP42704 1394 aaKnown RBP21.25■□□□□ 0.99
PTPRN-206ENST00000442029 LRRC59Q96AG4 307 aaKnown RBP21.25■□□□□ 0.99
PTPRN-206ENST00000442029 MYOM2P54296 1465 aa21.25■□□□□ 0.99
PTPRN-206ENST00000442029 TMEM132EQ6IEE7 984 aa21.24■□□□□ 0.99
PTPRN-206ENST00000442029 TECPR2O15040 1411 aa21.23■□□□□ 0.99
PTPRN-206ENST00000442029 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
PTPRN-206ENST00000442029 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
PTPRN-206ENST00000442029 POTEAQ6S8J7 498 aa21.23■□□□□ 0.99
PTPRN-206ENST00000442029 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms