RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 XIRP1Q702N8 1843 aaKnown RBP41.14■■■■■ 4.18
MRPL28-204ENST00000441883 RIMS2Q9UQ26 1411 aa41.12■■■■■ 4.17
MRPL28-204ENST00000441883 KCNA6P17658 529 aa41.12■■■■■ 4.17
MRPL28-204ENST00000441883 CHGAP10645 457 aaKnown RBP41.09■■■■■ 4.17
MRPL28-204ENST00000441883 NAIPQ13075 1403 aa41.09■■■■■ 4.17
MRPL28-204ENST00000441883 HDGFP51858 240 aaKnown RBP41.07■■■■■ 4.17
MRPL28-204ENST00000441883 PLEKHG1Q9ULL1 1385 aa41.07■■■■■ 4.16
MRPL28-204ENST00000441883 SENP3Q9H4L4 574 aaPredicted RBP41.06■■■■■ 4.16
MRPL28-204ENST00000441883 BCANQ96GW7 911 aa41.05■■■■■ 4.16
MRPL28-204ENST00000441883 PPP1R15AO75807 674 aaPredicted RBP41.01■■■■■ 4.16
MRPL28-204ENST00000441883 ILDR2Q71H61 639 aa41.01■■■■■ 4.16
MRPL28-204ENST00000441883 TMEM94Q12767 1356 aa41■■■■■ 4.15
MRPL28-204ENST00000441883 ABCF1Q8NE71 845 aaKnown RBP eCLIP41■■■■■ 4.15
MRPL28-204ENST00000441883 NWD1Q149M9 1564 aa40.99■■■■■ 4.15
MRPL28-204ENST00000441883 NUTM2DQ5VT03 806 aaPredicted RBP40.97■■■■■ 4.15
MRPL28-204ENST00000441883 PROSER2Q86WR7 435 aaPredicted RBP40.97■■■■■ 4.15
MRPL28-204ENST00000441883 SPHKAPQ2M3C7 1700 aa40.96■■■■■ 4.15
MRPL28-204ENST00000441883 TBX22Q9Y458 520 aa40.95■■■■■ 4.15
MRPL28-204ENST00000441883 RBM33Q96EV2 1170 aaKnown RBP40.94■■■■■ 4.14
MRPL28-204ENST00000441883 CHD2O14647 1828 aaKnown RBP40.93■■■■■ 4.14
MRPL28-204ENST00000441883 NKTRP30414 1462 aaKnown RBP40.92■■■■■ 4.14
MRPL28-204ENST00000441883 HFM1A2PYH4 1435 aa40.92■■■■■ 4.14
MRPL28-204ENST00000441883 ADAMTS13Q76LX8 1427 aa40.9■■■■■ 4.14
MRPL28-204ENST00000441883 CLTCL1P53675 1640 aa40.8■■■■■ 4.12
MRPL28-204ENST00000441883 TRIM52Q96A61 297 aa40.8■■■■■ 4.12
MRPL28-204ENST00000441883 FAM135BQ49AJ0 1406 aa40.79■■■■■ 4.12
MRPL28-204ENST00000441883 DIP2AQ14689 1571 aa40.78■■■■■ 4.12
MRPL28-204ENST00000441883 TRPM2O94759 1503 aa40.78■■■■■ 4.12
MRPL28-204ENST00000441883 MED1Q15648 1581 aaPredicted RBP40.77■■■■■ 4.12
MRPL28-204ENST00000441883 PIK3R4Q99570 1358 aa40.75■■■■■ 4.11
MRPL28-204ENST00000441883 ZNF326Q5BKZ1 582 aaKnown RBP40.73■■■■■ 4.11
MRPL28-204ENST00000441883 MSH6P52701 1360 aa40.72■■■■■ 4.11
MRPL28-204ENST00000441883 NRXN3Q9Y4C0 1643 aa40.71■■■■■ 4.11
MRPL28-204ENST00000441883 SLC4A1APQ9BWU0 796 aaKnown RBP40.69■■■■■ 4.1
MRPL28-204ENST00000441883 PTPRUQ92729 1446 aa40.68■■■■■ 4.1
MRPL28-204ENST00000441883 SETBP1Q9Y6X0 1596 aa40.67■■■■■ 4.1
MRPL28-204ENST00000441883 NCOA3Q9Y6Q9 1424 aa40.67■■■■■ 4.1
MRPL28-204ENST00000441883 KIF1BO60333 1816 aa40.66■■■■■ 4.1
MRPL28-204ENST00000441883 ROBO1Q9Y6N7 1651 aa40.66■■■■■ 4.1
MRPL28-204ENST00000441883 AMOTL2Q9Y2J4 779 aa40.65■■■■■ 4.1
MRPL28-204ENST00000441883 NEXMIFQ5QGS0 1516 aa40.65■■■■■ 4.1
MRPL28-204ENST00000441883 SOCS7O14512 581 aa40.63■■■■■ 4.09
MRPL28-204ENST00000441883 SLAIN2Q9P270 581 aa40.63■■■■■ 4.09
MRPL28-204ENST00000441883 METP08581 1390 aa40.56■■■■■ 4.08
MRPL28-204ENST00000441883 C19orf44Q9H6X5 657 aa40.55■■■■■ 4.08
MRPL28-204ENST00000441883 FOXD1Q16676 465 aa40.54■■■■■ 4.08
MRPL28-204ENST00000441883 C14orf37Q86TY3 774 aa40.54■■■■■ 4.08
MRPL28-204ENST00000441883 XRN1Q8IZH2 1706 aaKnown RBP40.53■■■■■ 4.08
MRPL28-204ENST00000441883 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.53■■■■■ 4.08
MRPL28-204ENST00000441883 MPHOSPH9Q99550 1183 aa40.47■■■■■ 4.07
MRPL28-204ENST00000441883 CADPS2Q86UW7 1296 aa40.46■■■■■ 4.07
MRPL28-204ENST00000441883 RPGRIP1LQ68CZ1 1315 aa40.45■■■■■ 4.07
MRPL28-204ENST00000441883 VGFO15240 615 aaPredicted RBP40.45■■■■■ 4.07
MRPL28-204ENST00000441883 PHF23Q9BUL5 403 aaPredicted RBP40.45■■■■■ 4.07
MRPL28-204ENST00000441883 ATF3P18847 181 aa40.43■■■■■ 4.06
MRPL28-204ENST00000441883 PHLPP1O60346 1717 aa40.39■■■■■ 4.06
MRPL28-204ENST00000441883 PPLO60437 1756 aa40.38■■■■■ 4.05
MRPL28-204ENST00000441883 SETD1AO15047 1707 aaKnown RBP40.37■■■■■ 4.05
MRPL28-204ENST00000441883 SETD5Q9C0A6 1442 aa40.35■■■■■ 4.05
MRPL28-204ENST00000441883 DCCP43146 1447 aa40.34■■■■■ 4.05
MRPL28-204ENST00000441883 RGS17Q9UGC6 210 aaPredicted RBP40.34■■■■■ 4.05
MRPL28-204ENST00000441883 CCDC144AA2RUR9 1427 aa40.33■■■■■ 4.05
MRPL28-204ENST00000441883 COL16A1Q07092 1604 aaPredicted RBP40.31■■■■■ 4.04
MRPL28-204ENST00000441883 SPATA31E1Q6ZUB1 1445 aa40.3■■■■■ 4.04
MRPL28-204ENST00000441883 ACIN1Q9UKV3 1341 aaKnown RBP40.28■■■■■ 4.04
MRPL28-204ENST00000441883 BRINP3Q76B58 766 aa40.28■■■■■ 4.04
MRPL28-204ENST00000441883 JCADQ9P266 1359 aa40.27■■■■■ 4.04
MRPL28-204ENST00000441883 ADGRL3Q9HAR2 1447 aa40.26■■■■■ 4.04
MRPL28-204ENST00000441883 RGL3Q3MIN7 710 aa40.26■■■■■ 4.04
MRPL28-204ENST00000441883 AHDC1Q5TGY3 1603 aaPredicted RBP40.26■■■■■ 4.04
MRPL28-204ENST00000441883 MST1RQ04912 1400 aa40.25■■■■■ 4.03
MRPL28-204ENST00000441883 ADGRF5Q8IZF2 1346 aa40.23■■■■■ 4.03
MRPL28-204ENST00000441883 ROBO2Q9HCK4 1378 aa40.23■■■■■ 4.03
MRPL28-204ENST00000441883 NALCNQ8IZF0 1738 aa40.22■■■■■ 4.03
MRPL28-204ENST00000441883 PTCH1Q13635 1447 aa40.22■■■■■ 4.03
MRPL28-204ENST00000441883 PRAG1Q86YV5 1406 aa40.2■■■■■ 4.03
MRPL28-204ENST00000441883 RAB3GAP2Q9H2M9 1393 aa40.2■■■■■ 4.03
MRPL28-204ENST00000441883 IFT172Q9UG01 1749 aa40.18■■■■■ 4.02
MRPL28-204ENST00000441883 ANKRD30BQ9BXX2 1392 aa40.16■■■■■ 4.02
MRPL28-204ENST00000441883 ASXL1Q8IXJ9 1541 aa40.15■■■■■ 4.02
MRPL28-204ENST00000441883 POTEAQ6S8J7 498 aa40.09■■■■■ 4.01
MRPL28-204ENST00000441883 SPATA31A6Q5VVP1 1343 aa40.08■■■■■ 4.01
MRPL28-204ENST00000441883 NHSL1Q5SYE7 1610 aa40.07■■■■■ 4.01
MRPL28-204ENST00000441883 SHPRHQ149N8 1683 aa40.06■■■■■ 4
MRPL28-204ENST00000441883 LRP6O75581 1613 aa40.05■■■■■ 4
MRPL28-204ENST00000441883 C1orf167Q5SNV9 1468 aa40.04■■■■■ 4
MRPL28-204ENST00000441883 PIK3C2GO75747 1445 aa40.03■■■■■ 4
MRPL28-204ENST00000441883 DDX17Q92841 729 aaKnown RBP40.02■■■■■ 4
MRPL28-204ENST00000441883 TMEM132EQ6IEE7 984 aa40■■■■□ 3.99
MRPL28-204ENST00000441883 LRPPRCP42704 1394 aaKnown RBP39.98■■■■□ 3.99
MRPL28-204ENST00000441883 STK26Q9P289 416 aa39.98■■■■□ 3.99
MRPL28-204ENST00000441883 TECPR2O15040 1411 aa39.98■■■■□ 3.99
MRPL28-204ENST00000441883 ORAI2Q96SN7 254 aa39.96■■■■□ 3.99
MRPL28-204ENST00000441883 ABCC11Q96J66 1382 aa39.96■■■■□ 3.99
MRPL28-204ENST00000441883 HRCP23327 699 aa39.95■■■■□ 3.99
MRPL28-204ENST00000441883 LRRC59Q96AG4 307 aaKnown RBP39.94■■■■□ 3.98
MRPL28-204ENST00000441883 NRXN1Q9ULB1 1477 aa39.94■■■■□ 3.98
MRPL28-204ENST00000441883 WAPLQ7Z5K2 1190 aa39.93■■■■□ 3.98
MRPL28-204ENST00000441883 C14orf93Q9H972 538 aaKnown RBP39.93■■■■□ 3.98
MRPL28-204ENST00000441883 LAMC1P11047 1609 aa39.91■■■■□ 3.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms