RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 TOP2AP11388 1531 aaKnown RBP10.99□□□□□ -0.65
CHD6-204ENST00000440647 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
CHD6-204ENST00000440647 TSR3Q9UJK0 312 aaKnown RBP10.98□□□□□ -0.65
CHD6-204ENST00000440647 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
CHD6-204ENST00000440647 FANCD2Q9BXW9 1451 aa10.98□□□□□ -0.65
CHD6-204ENST00000440647 TULP1O00294 542 aaPredicted RBP10.97□□□□□ -0.65
CHD6-204ENST00000440647 FCHSD2O94868 740 aa10.97□□□□□ -0.65
CHD6-204ENST00000440647 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
CHD6-204ENST00000440647 A0A0G2JS52 829 aa10.96□□□□□ -0.65
CHD6-204ENST00000440647 HDGFP51858 240 aaKnown RBP10.96□□□□□ -0.65
CHD6-204ENST00000440647 TATDN2Q93075 761 aa10.96□□□□□ -0.65
CHD6-204ENST00000440647 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
CHD6-204ENST00000440647 CFTRP13569 1480 aa10.95□□□□□ -0.66
CHD6-204ENST00000440647 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
CHD6-204ENST00000440647 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
CHD6-204ENST00000440647 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
CHD6-204ENST00000440647 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
CHD6-204ENST00000440647 C3orf80F5H4A9 247 aa10.93□□□□□ -0.66
CHD6-204ENST00000440647 SMAPO00193 183 aa10.93□□□□□ -0.66
CHD6-204ENST00000440647 PPP4CP60510 307 aa10.93□□□□□ -0.66
CHD6-204ENST00000440647 KCNC4Q03721 635 aa10.93□□□□□ -0.66
CHD6-204ENST00000440647 NUDT18Q6ZVK8 323 aa10.93□□□□□ -0.66
CHD6-204ENST00000440647 HIC1Q14526 733 aa10.92□□□□□ -0.66
CHD6-204ENST00000440647 HPS5Q9UPZ3 1129 aa10.92□□□□□ -0.66
CHD6-204ENST00000440647 GPR37O15354 613 aa10.89□□□□□ -0.67
CHD6-204ENST00000440647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHD6-204ENST00000440647 GPIHBP1Q8IV16 184 aa10.89□□□□□ -0.67
CHD6-204ENST00000440647 GNPATO15228 680 aa10.88□□□□□ -0.67
CHD6-204ENST00000440647 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
CHD6-204ENST00000440647 NECTIN2Q92692 538 aa10.87□□□□□ -0.67
CHD6-204ENST00000440647 EYA1Q99502 592 aa10.87□□□□□ -0.67
CHD6-204ENST00000440647 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
CHD6-204ENST00000440647 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
CHD6-204ENST00000440647 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
CHD6-204ENST00000440647 FECHP22830 423 aa10.84□□□□□ -0.67
CHD6-204ENST00000440647 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
CHD6-204ENST00000440647 IRX2Q9BZI1 471 aaPredicted RBP10.84□□□□□ -0.67
CHD6-204ENST00000440647 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
CHD6-204ENST00000440647 OATP04181 439 aa10.82□□□□□ -0.68
CHD6-204ENST00000440647 FAM161AQ3B820 660 aa10.82□□□□□ -0.68
CHD6-204ENST00000440647 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
CHD6-204ENST00000440647 RNF40O75150 1001 aa10.78□□□□□ -0.68
CHD6-204ENST00000440647 DNAJB2P25686 324 aa10.78□□□□□ -0.68
CHD6-204ENST00000440647 SWT1Q5T5J6 900 aaKnown RBP10.78□□□□□ -0.68
CHD6-204ENST00000440647 SLF2Q8IX21 1173 aa10.78□□□□□ -0.68
CHD6-204ENST00000440647 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
CHD6-204ENST00000440647 IFT140Q96RY7 1462 aa10.78□□□□□ -0.68
CHD6-204ENST00000440647 RCCD1A6NED2 376 aa10.77□□□□□ -0.69
CHD6-204ENST00000440647 TOPBP1Q92547 1522 aa10.77□□□□□ -0.69
CHD6-204ENST00000440647 ABCC8Q09428 1581 aa10.77□□□□□ -0.69
CHD6-204ENST00000440647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.76□□□□□ -0.69
CHD6-204ENST00000440647 METTL3Q86U44 580 aaKnown RBP10.76□□□□□ -0.69
CHD6-204ENST00000440647 IL21Q9HBE4 155 aa10.76□□□□□ -0.69
CHD6-204ENST00000440647 DNMBPQ6XZF7 1577 aa10.75□□□□□ -0.69
CHD6-204ENST00000440647 TMEM134Q9H6X4 195 aa10.75□□□□□ -0.69
CHD6-204ENST00000440647 ZNF608Q9ULD9 1512 aaPredicted RBP10.74□□□□□ -0.69
CHD6-204ENST00000440647 EIF4G3O43432 1585 aaKnown RBP10.74□□□□□ -0.69
CHD6-204ENST00000440647 TJAP1Q5JTD0 557 aa10.74□□□□□ -0.69
CHD6-204ENST00000440647 MAP2K5Q13163 448 aa10.73□□□□□ -0.69
CHD6-204ENST00000440647 BCANQ96GW7 911 aa10.73□□□□□ -0.69
CHD6-204ENST00000440647 PRR14Q9BWN1 585 aa10.73□□□□□ -0.69
CHD6-204ENST00000440647 IRF6O14896 467 aa10.72□□□□□ -0.69
CHD6-204ENST00000440647 MTRQ99707 1265 aa10.72□□□□□ -0.69
CHD6-204ENST00000440647 MINK1Q8N4C8 1332 aaPredicted RBP10.72□□□□□ -0.69
CHD6-204ENST00000440647 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
CHD6-204ENST00000440647 RIMBP3CA6NJZ7 1639 aa10.7□□□□□ -0.7
CHD6-204ENST00000440647 RIMBP3BA6NNM3 1639 aa10.7□□□□□ -0.7
CHD6-204ENST00000440647 RIMBP3Q9UFD9 1639 aa10.7□□□□□ -0.7
CHD6-204ENST00000440647 ZMYND10O75800 440 aa10.69□□□□□ -0.7
CHD6-204ENST00000440647 CHD1O14646 1710 aa10.68□□□□□ -0.7
CHD6-204ENST00000440647 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
CHD6-204ENST00000440647 BARGINQ6ZT62 677 aa10.68□□□□□ -0.7
CHD6-204ENST00000440647 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
CHD6-204ENST00000440647 TARBP1Q13395 1621 aaKnown RBP10.68□□□□□ -0.7
CHD6-204ENST00000440647 GGCXP38435 758 aa10.67□□□□□ -0.7
CHD6-204ENST00000440647 APLP1P51693 650 aa10.67□□□□□ -0.7
CHD6-204ENST00000440647 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
CHD6-204ENST00000440647 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
CHD6-204ENST00000440647 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
CHD6-204ENST00000440647 ARHGEF11O15085 1522 aa10.64□□□□□ -0.71
CHD6-204ENST00000440647 AQRO60306 1485 aaKnown RBP eCLIP10.64□□□□□ -0.719e-19■□□□□ 9
CHD6-204ENST00000440647 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
CHD6-204ENST00000440647 PPP1R18Q6NYC8 613 aa10.63□□□□□ -0.71
CHD6-204ENST00000440647 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
CHD6-204ENST00000440647 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
CHD6-204ENST00000440647 SLC10A3P09131 477 aa10.62□□□□□ -0.71
CHD6-204ENST00000440647 RSPH4AQ5TD94 716 aa10.62□□□□□ -0.71
CHD6-204ENST00000440647 Q6ZNB5 142 aa10.61□□□□□ -0.71
CHD6-204ENST00000440647 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
CHD6-204ENST00000440647 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
CHD6-204ENST00000440647 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
CHD6-204ENST00000440647 COPS2P61201 443 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 TMUB1Q9BVT8 246 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 PCDHB3Q9Y5E6 796 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 FGD5Q6ZNL6 1462 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
CHD6-204ENST00000440647 SOGA1O94964 1423 aa10.59□□□□□ -0.71
CHD6-204ENST00000440647 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
CHD6-204ENST00000440647 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms