RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 ZNF335Q9H4Z2 1342 aaPredicted RBP33.12■■■□□ 2.89
CNOT3-203ENST00000440571 CCDC144AA2RUR9 1427 aa33.11■■■□□ 2.89
CNOT3-203ENST00000440571 ZFYVE9O95405 1425 aa33.11■■■□□ 2.89
CNOT3-203ENST00000440571 SENP3Q9H4L4 574 aaPredicted RBP33.1■■■□□ 2.89
CNOT3-203ENST00000440571 POLR1AO95602 1720 aaPredicted RBP33.09■■■□□ 2.89
CNOT3-203ENST00000440571 CLTCL1P53675 1640 aa33.09■■■□□ 2.89
CNOT3-203ENST00000440571 CERKQ8TCT0 537 aa33.07■■■□□ 2.88
CNOT3-203ENST00000440571 SLC26A8Q96RN1 970 aa33.06■■■□□ 2.88
CNOT3-203ENST00000440571 RGL3Q3MIN7 710 aa33.04■■■□□ 2.88
CNOT3-203ENST00000440571 PLEKHG1Q9ULL1 1385 aa33.04■■■□□ 2.88
CNOT3-203ENST00000440571 RPGRIP1LQ68CZ1 1315 aa33.03■■■□□ 2.88
CNOT3-203ENST00000440571 ANKRD30BQ9BXX2 1392 aa33.02■■■□□ 2.88
CNOT3-203ENST00000440571 IQGAP1P46940 1657 aa33.01■■■□□ 2.87
CNOT3-203ENST00000440571 VGFO15240 615 aaPredicted RBP32.99■■■□□ 2.87
CNOT3-203ENST00000440571 MYO5BQ9ULV0 1848 aa32.98■■■□□ 2.87
CNOT3-203ENST00000440571 TBX22Q9Y458 520 aa32.97■■■□□ 2.87
CNOT3-203ENST00000440571 LTBP4Q8N2S1 1624 aa32.93■■■□□ 2.86
CNOT3-203ENST00000440571 KIF1BO60333 1816 aa32.93■■■□□ 2.86
CNOT3-203ENST00000440571 SPATA31E1Q6ZUB1 1445 aa32.91■■■□□ 2.86
CNOT3-203ENST00000440571 KCNA6P17658 529 aa32.9■■■□□ 2.86
CNOT3-203ENST00000440571 PCGF6Q9BYE7 350 aa32.9■■■□□ 2.86
CNOT3-203ENST00000440571 NEXMIFQ5QGS0 1516 aa32.86■■■□□ 2.85
CNOT3-203ENST00000440571 ADAMTS13Q76LX8 1427 aa32.85■■■□□ 2.85
CNOT3-203ENST00000440571 CPS1P31327 1500 aa32.82■■■□□ 2.85
CNOT3-203ENST00000440571 FBXO41Q8TF61 875 aa32.8■■■□□ 2.84
CNOT3-203ENST00000440571 ADGRF5Q8IZF2 1346 aa32.79■■■□□ 2.84
CNOT3-203ENST00000440571 PROSER2Q86WR7 435 aaPredicted RBP32.78■■■□□ 2.84
CNOT3-203ENST00000440571 DHX57Q6P158 1386 aaKnown RBP32.77■■■□□ 2.84
CNOT3-203ENST00000440571 PIK3R4Q99570 1358 aa32.77■■■□□ 2.84
CNOT3-203ENST00000440571 AMOTL2Q9Y2J4 779 aa32.75■■■□□ 2.83
CNOT3-203ENST00000440571 IQSEC2Q5JU85 1478 aa32.74■■■□□ 2.83
CNOT3-203ENST00000440571 DCAF11Q8TEB1 546 aa32.73■■■□□ 2.83
CNOT3-203ENST00000440571 KDM2AQ9Y2K7 1162 aa32.73■■■□□ 2.83
CNOT3-203ENST00000440571 SETBP1Q9Y6X0 1596 aa32.73■■■□□ 2.83
CNOT3-203ENST00000440571 METP08581 1390 aa32.71■■■□□ 2.83
CNOT3-203ENST00000440571 DIP2AQ14689 1571 aa32.71■■■□□ 2.83
CNOT3-203ENST00000440571 ILDR1Q86SU0 546 aaPredicted RBP32.71■■■□□ 2.83
CNOT3-203ENST00000440571 LRRC7Q96NW7 1537 aa32.71■■■□□ 2.83
CNOT3-203ENST00000440571 STAC3Q96MF2 364 aa32.7■■■□□ 2.83
CNOT3-203ENST00000440571 SIN3AQ96ST3 1273 aa32.7■■■□□ 2.83
CNOT3-203ENST00000440571 NEUROD1Q13562 356 aa32.69■■■□□ 2.82
CNOT3-203ENST00000440571 UBAP1LF5GYI3 381 aa32.68■■■□□ 2.82
CNOT3-203ENST00000440571 RBM33Q96EV2 1170 aaKnown RBP32.68■■■□□ 2.82
CNOT3-203ENST00000440571 STRCP1A6NGW2 1772 aa32.65■■■□□ 2.82
CNOT3-203ENST00000440571 PPLO60437 1756 aa32.65■■■□□ 2.82
CNOT3-203ENST00000440571 TOM1O60784 492 aa32.65■■■□□ 2.82
CNOT3-203ENST00000440571 TMEM94Q12767 1356 aa32.65■■■□□ 2.82
CNOT3-203ENST00000440571 PTPRUQ92729 1446 aa32.65■■■□□ 2.82
CNOT3-203ENST00000440571 NRXN3Q9Y4C0 1643 aa32.64■■■□□ 2.82
CNOT3-203ENST00000440571 C14orf93Q9H972 538 aaKnown RBP32.62■■■□□ 2.81
CNOT3-203ENST00000440571 NKTRP30414 1462 aaKnown RBP32.61■■■□□ 2.81
CNOT3-203ENST00000440571 ALKQ9UM73 1620 aa32.61■■■□□ 2.81
CNOT3-203ENST00000440571 NWD1Q149M9 1564 aa32.59■■■□□ 2.81
CNOT3-203ENST00000440571 CFAP70Q5T0N1 1121 aa32.59■■■□□ 2.81
CNOT3-203ENST00000440571 MYOM2P54296 1465 aa32.59■■■□□ 2.81
CNOT3-203ENST00000440571 PIK3C2GO75747 1445 aa32.59■■■□□ 2.81
CNOT3-203ENST00000440571 TMEM132EQ6IEE7 984 aa32.58■■■□□ 2.81
CNOT3-203ENST00000440571 C14orf37Q86TY3 774 aa32.58■■■□□ 2.81
CNOT3-203ENST00000440571 CHD2O14647 1828 aaKnown RBP32.56■■■□□ 2.8
CNOT3-203ENST00000440571 NRXN1Q9ULB1 1477 aa32.54■■■□□ 2.8
CNOT3-203ENST00000440571 L3MBTL2Q969R5 705 aa32.54■■■□□ 2.8
CNOT3-203ENST00000440571 STK26Q9P289 416 aa32.54■■■□□ 2.8
CNOT3-203ENST00000440571 IFT172Q9UG01 1749 aa32.53■■■□□ 2.8
CNOT3-203ENST00000440571 NCOA3Q9Y6Q9 1424 aa32.52■■■□□ 2.8
CNOT3-203ENST00000440571 PIP4K2BP78356 416 aa32.52■■■□□ 2.8
CNOT3-203ENST00000440571 SCAF1Q9H7N4 1312 aaKnown RBP32.51■■■□□ 2.79
CNOT3-203ENST00000440571 MSH6P52701 1360 aa32.49■■■□□ 2.79
CNOT3-203ENST00000440571 C19orf44Q9H6X5 657 aa32.49■■■□□ 2.79
CNOT3-203ENST00000440571 LRPPRCP42704 1394 aaKnown RBP32.46■■■□□ 2.79
CNOT3-203ENST00000440571 ABCC11Q96J66 1382 aa32.44■■■□□ 2.78
CNOT3-203ENST00000440571 ROBO2Q9HCK4 1378 aa32.44■■■□□ 2.78
CNOT3-203ENST00000440571 ATF3P18847 181 aa32.43■■■□□ 2.78
CNOT3-203ENST00000440571 SETD1AO15047 1707 aaKnown RBP32.4■■■□□ 2.78
CNOT3-203ENST00000440571 XRN1Q8IZH2 1706 aaKnown RBP32.4■■■□□ 2.78
CNOT3-203ENST00000440571 CADPS2Q86UW7 1296 aa32.4■■■□□ 2.78
CNOT3-203ENST00000440571 YTHDC2Q9H6S0 1430 aaKnown RBP32.4■■■□□ 2.78
CNOT3-203ENST00000440571 WAPLQ7Z5K2 1190 aa32.39■■■□□ 2.78
CNOT3-203ENST00000440571 SIRT1Q96EB6 747 aa32.39■■■□□ 2.78
CNOT3-203ENST00000440571 SLAIN2Q9P270 581 aa32.39■■■□□ 2.78
CNOT3-203ENST00000440571 PTCH1Q13635 1447 aa32.39■■■□□ 2.78
CNOT3-203ENST00000440571 TONSLQ96HA7 1378 aa32.36■■■□□ 2.77
CNOT3-203ENST00000440571 PRAG1Q86YV5 1406 aa32.35■■■□□ 2.77
CNOT3-203ENST00000440571 XIRP1Q702N8 1843 aaKnown RBP32.35■■■□□ 2.77
CNOT3-203ENST00000440571 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
CNOT3-203ENST00000440571 TRAK1Q9UPV9 953 aa32.35■■■□□ 2.77
CNOT3-203ENST00000440571 CLSPNQ9HAW4 1339 aa32.33■■■□□ 2.77
CNOT3-203ENST00000440571 ASXL1Q8IXJ9 1541 aa32.33■■■□□ 2.77
CNOT3-203ENST00000440571 TECPR2O15040 1411 aa32.33■■■□□ 2.77
CNOT3-203ENST00000440571 NBPF1Q3BBV0 1214 aa32.31■■■□□ 2.76
CNOT3-203ENST00000440571 POGKQ9P215 609 aa32.31■■■□□ 2.76
CNOT3-203ENST00000440571 LAMC1P11047 1609 aa32.3■■■□□ 2.76
CNOT3-203ENST00000440571 PRAM1Q96QH2 718 aa32.29■■■□□ 2.76
CNOT3-203ENST00000440571 ADGRL3Q9HAR2 1447 aa32.28■■■□□ 2.76
CNOT3-203ENST00000440571 PLEKHH1Q9ULM0 1364 aa32.27■■■□□ 2.76
CNOT3-203ENST00000440571 FAM135BQ49AJ0 1406 aa32.26■■■□□ 2.76
CNOT3-203ENST00000440571 ADGRB1O14514 1584 aa32.25■■■□□ 2.75
CNOT3-203ENST00000440571 SAFB2Q14151 953 aaKnown RBP eCLIP32.25■■■□□ 2.75
CNOT3-203ENST00000440571 DCCP43146 1447 aa32.25■■■□□ 2.75
CNOT3-203ENST00000440571 HSPA1LP34931 641 aa32.24■■■□□ 2.75
CNOT3-203ENST00000440571 NBPF8Q3BBV2 869 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms