RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 HRCP23327 699 aa26.71■■□□□ 1.87
CPSF4-205ENST00000440514 CCDC144AA2RUR9 1427 aa26.69■■□□□ 1.86
CPSF4-205ENST00000440514 NUTM2DQ5VT03 806 aaPredicted RBP26.68■■□□□ 1.86
CPSF4-205ENST00000440514 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
CPSF4-205ENST00000440514 PPP1R15AO75807 674 aaPredicted RBP26.67■■□□□ 1.86
CPSF4-205ENST00000440514 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
CPSF4-205ENST00000440514 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
CPSF4-205ENST00000440514 PLEKHG1Q9ULL1 1385 aa26.66■■□□□ 1.86
CPSF4-205ENST00000440514 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
CPSF4-205ENST00000440514 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
CPSF4-205ENST00000440514 CERKQ8TCT0 537 aa26.64■■□□□ 1.86
CPSF4-205ENST00000440514 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.63■■□□□ 1.85
CPSF4-205ENST00000440514 HDGFP51858 240 aaKnown RBP26.61■■□□□ 1.85
CPSF4-205ENST00000440514 BCANQ96GW7 911 aa26.6■■□□□ 1.85
CPSF4-205ENST00000440514 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
CPSF4-205ENST00000440514 PPLO60437 1756 aa26.6■■□□□ 1.85
CPSF4-205ENST00000440514 CPS1P31327 1500 aa26.6■■□□□ 1.85
CPSF4-205ENST00000440514 NRXN3Q9Y4C0 1643 aa26.59■■□□□ 1.85
CPSF4-205ENST00000440514 SPATA31E1Q6ZUB1 1445 aa26.58■■□□□ 1.85
CPSF4-205ENST00000440514 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
CPSF4-205ENST00000440514 ADAMTS13Q76LX8 1427 aa26.56■■□□□ 1.84
CPSF4-205ENST00000440514 DIP2AQ14689 1571 aa26.56■■□□□ 1.84
CPSF4-205ENST00000440514 SETBP1Q9Y6X0 1596 aa26.56■■□□□ 1.84
CPSF4-205ENST00000440514 IFT172Q9UG01 1749 aa26.56■■□□□ 1.84
CPSF4-205ENST00000440514 NWD1Q149M9 1564 aa26.54■■□□□ 1.84
CPSF4-205ENST00000440514 IQSEC2Q5JU85 1478 aa26.53■■□□□ 1.84
CPSF4-205ENST00000440514 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
CPSF4-205ENST00000440514 LRRC7Q96NW7 1537 aa26.49■■□□□ 1.83
CPSF4-205ENST00000440514 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
CPSF4-205ENST00000440514 CHD2O14647 1828 aaKnown RBP26.49■■□□□ 1.83
CPSF4-205ENST00000440514 TBX22Q9Y458 520 aa26.46■■□□□ 1.83
CPSF4-205ENST00000440514 SETD1AO15047 1707 aaKnown RBP26.45■■□□□ 1.83
CPSF4-205ENST00000440514 XIRP1Q702N8 1843 aaKnown RBP26.44■■□□□ 1.82
CPSF4-205ENST00000440514 NKTRP30414 1462 aaKnown RBP26.44■■□□□ 1.82
CPSF4-205ENST00000440514 KCNA6P17658 529 aa26.44■■□□□ 1.82
CPSF4-205ENST00000440514 FBXO41Q8TF61 875 aa26.44■■□□□ 1.82
CPSF4-205ENST00000440514 VGFO15240 615 aaPredicted RBP26.43■■□□□ 1.82
CPSF4-205ENST00000440514 ILDR1Q86SU0 546 aaPredicted RBP26.42■■□□□ 1.82
CPSF4-205ENST00000440514 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
CPSF4-205ENST00000440514 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
CPSF4-205ENST00000440514 PTPRUQ92729 1446 aa26.4■■□□□ 1.82
CPSF4-205ENST00000440514 ALKQ9UM73 1620 aa26.4■■□□□ 1.82
CPSF4-205ENST00000440514 XRN1Q8IZH2 1706 aaKnown RBP26.4■■□□□ 1.82
CPSF4-205ENST00000440514 METP08581 1390 aa26.39■■□□□ 1.82
CPSF4-205ENST00000440514 PIK3R4Q99570 1358 aa26.39■■□□□ 1.82
CPSF4-205ENST00000440514 MYOM2P54296 1465 aa26.38■■□□□ 1.81
CPSF4-205ENST00000440514 TMEM94Q12767 1356 aa26.35■■□□□ 1.81
CPSF4-205ENST00000440514 PIK3C2GO75747 1445 aa26.35■■□□□ 1.81
CPSF4-205ENST00000440514 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
CPSF4-205ENST00000440514 PROSER2Q86WR7 435 aaPredicted RBP26.33■■□□□ 1.81
CPSF4-205ENST00000440514 RBM33Q96EV2 1170 aaKnown RBP26.33■■□□□ 1.81
CPSF4-205ENST00000440514 ASXL1Q8IXJ9 1541 aa26.31■■□□□ 1.8
CPSF4-205ENST00000440514 AMOTL2Q9Y2J4 779 aa26.31■■□□□ 1.8
CPSF4-205ENST00000440514 UBAP1LF5GYI3 381 aa26.3■■□□□ 1.8
CPSF4-205ENST00000440514 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
CPSF4-205ENST00000440514 LAMC1P11047 1609 aa26.28■■□□□ 1.8
CPSF4-205ENST00000440514 DCAF11Q8TEB1 546 aa26.25■■□□□ 1.79
CPSF4-205ENST00000440514 KDM2AQ9Y2K7 1162 aa26.24■■□□□ 1.79
CPSF4-205ENST00000440514 SIN3AQ96ST3 1273 aa26.23■■□□□ 1.79
CPSF4-205ENST00000440514 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
CPSF4-205ENST00000440514 TOM1O60784 492 aa26.21■■□□□ 1.79
CPSF4-205ENST00000440514 PRAG1Q86YV5 1406 aa26.21■■□□□ 1.79
CPSF4-205ENST00000440514 KNDC1Q76NI1 1749 aa26.2■■□□□ 1.79
CPSF4-205ENST00000440514 MSH6P52701 1360 aa26.2■■□□□ 1.78
CPSF4-205ENST00000440514 NALCNQ8IZF0 1738 aa26.19■■□□□ 1.78
CPSF4-205ENST00000440514 PIP4K2BP78356 416 aa26.19■■□□□ 1.78
CPSF4-205ENST00000440514 ROBO2Q9HCK4 1378 aa26.19■■□□□ 1.78
CPSF4-205ENST00000440514 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
CPSF4-205ENST00000440514 CFAP70Q5T0N1 1121 aa26.18■■□□□ 1.78
CPSF4-205ENST00000440514 TMEM132EQ6IEE7 984 aa26.18■■□□□ 1.78
CPSF4-205ENST00000440514 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.18■■□□□ 1.78
CPSF4-205ENST00000440514 NCOA3Q9Y6Q9 1424 aa26.18■■□□□ 1.78
CPSF4-205ENST00000440514 NEUROD1Q13562 356 aa26.17■■□□□ 1.78
CPSF4-205ENST00000440514 C14orf37Q86TY3 774 aa26.17■■□□□ 1.78
CPSF4-205ENST00000440514 C14orf93Q9H972 538 aaKnown RBP26.17■■□□□ 1.78
CPSF4-205ENST00000440514 LRPPRCP42704 1394 aaKnown RBP26.16■■□□□ 1.78
CPSF4-205ENST00000440514 YTHDC2Q9H6S0 1430 aaKnown RBP26.15■■□□□ 1.78
CPSF4-205ENST00000440514 ADGRB1O14514 1584 aa26.15■■□□□ 1.78
CPSF4-205ENST00000440514 TECPR2O15040 1411 aa26.14■■□□□ 1.78
CPSF4-205ENST00000440514 STK26Q9P289 416 aa26.13■■□□□ 1.77
CPSF4-205ENST00000440514 ADGRL3Q9HAR2 1447 aa26.13■■□□□ 1.77
CPSF4-205ENST00000440514 STAC3Q96MF2 364 aa26.12■■□□□ 1.77
CPSF4-205ENST00000440514 L3MBTL2Q969R5 705 aa26.1■■□□□ 1.77
CPSF4-205ENST00000440514 ABCC11Q96J66 1382 aa26.09■■□□□ 1.77
CPSF4-205ENST00000440514 KIAA1210Q9ULL0 1709 aa26.08■■□□□ 1.77
CPSF4-205ENST00000440514 DCCP43146 1447 aa26.08■■□□□ 1.77
CPSF4-205ENST00000440514 C19orf44Q9H6X5 657 aa26.08■■□□□ 1.77
CPSF4-205ENST00000440514 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.77
CPSF4-205ENST00000440514 PLEKHH1Q9ULM0 1364 aa26.06■■□□□ 1.76
CPSF4-205ENST00000440514 DLC1Q96QB1 1528 aa26.04■■□□□ 1.76
CPSF4-205ENST00000440514 ATF3P18847 181 aa26.03■■□□□ 1.76
CPSF4-205ENST00000440514 WAPLQ7Z5K2 1190 aa26.03■■□□□ 1.76
CPSF4-205ENST00000440514 CADPS2Q86UW7 1296 aa26.02■■□□□ 1.76
CPSF4-205ENST00000440514 FAM135BQ49AJ0 1406 aa26.02■■□□□ 1.76
CPSF4-205ENST00000440514 CDC42BPGQ6DT37 1551 aa26.02■■□□□ 1.76
CPSF4-205ENST00000440514 MST1RQ04912 1400 aa26.01■■□□□ 1.75
CPSF4-205ENST00000440514 TONSLQ96HA7 1378 aa26.01■■□□□ 1.75
CPSF4-205ENST00000440514 SLAIN2Q9P270 581 aa26.01■■□□□ 1.75
CPSF4-205ENST00000440514 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
CPSF4-205ENST00000440514 TRPM1Q7Z4N2 1603 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms