RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 MSH6P52701 1360 aa32.17■■■□□ 2.74
TRIM39-210ENST00000440271 NWD1Q149M9 1564 aa32.16■■■□□ 2.74
TRIM39-210ENST00000440271 SLAIN2Q9P270 581 aa32.16■■■□□ 2.74
TRIM39-210ENST00000440271 ADGRL2O95490 1459 aa32.11■■■□□ 2.73
TRIM39-210ENST00000440271 RPRD2Q5VT52 1461 aaKnown RBP32.1■■■□□ 2.73
TRIM39-210ENST00000440271 ZFYVE9O95405 1425 aa32.09■■■□□ 2.73
TRIM39-210ENST00000440271 PLEKHG1Q9ULL1 1385 aa32.09■■■□□ 2.73
TRIM39-210ENST00000440271 HDGFP51858 240 aaKnown RBP32.09■■■□□ 2.73
TRIM39-210ENST00000440271 PPP1R15AO75807 674 aaPredicted RBP32.08■■■□□ 2.73
TRIM39-210ENST00000440271 ANKRD50Q9ULJ7 1429 aa32.07■■■□□ 2.72
TRIM39-210ENST00000440271 FAM50AQ14320 339 aaKnown RBP32.06■■■□□ 2.72
TRIM39-210ENST00000440271 RIMS2Q9UQ26 1411 aa32.06■■■□□ 2.72
TRIM39-210ENST00000440271 JCADQ9P266 1359 aa32.06■■■□□ 2.72
TRIM39-210ENST00000440271 TBX22Q9Y458 520 aa32.04■■■□□ 2.72
TRIM39-210ENST00000440271 PHLPP1O60346 1717 aa32.03■■■□□ 2.72
TRIM39-210ENST00000440271 CHD2O14647 1828 aaKnown RBP32.02■■■□□ 2.72
TRIM39-210ENST00000440271 MYO5BQ9ULV0 1848 aa31.99■■■□□ 2.71
TRIM39-210ENST00000440271 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.99■■■□□ 2.71
TRIM39-210ENST00000440271 TMEM131LA2VDJ0 1609 aa31.98■■■□□ 2.71
TRIM39-210ENST00000440271 NCOA3Q9Y6Q9 1424 aa31.98■■■□□ 2.71
TRIM39-210ENST00000440271 GCC2Q8IWJ2 1684 aa31.97■■■□□ 2.71
TRIM39-210ENST00000440271 CHGAP10645 457 aaKnown RBP31.97■■■□□ 2.71
TRIM39-210ENST00000440271 C14orf37Q86TY3 774 aa31.96■■■□□ 2.71
TRIM39-210ENST00000440271 NUTM2DQ5VT03 806 aaPredicted RBP31.94■■■□□ 2.7
TRIM39-210ENST00000440271 COL16A1Q07092 1604 aaPredicted RBP31.93■■■□□ 2.7
TRIM39-210ENST00000440271 ADAMTS13Q76LX8 1427 aa31.92■■■□□ 2.7
TRIM39-210ENST00000440271 C19orf44Q9H6X5 657 aa31.91■■■□□ 2.7
TRIM39-210ENST00000440271 CADPS2Q86UW7 1296 aa31.9■■■□□ 2.7
TRIM39-210ENST00000440271 SPATA31A6Q5VVP1 1343 aa31.9■■■□□ 2.7
TRIM39-210ENST00000440271 ATF3P18847 181 aa31.88■■■□□ 2.69
TRIM39-210ENST00000440271 SETD1AO15047 1707 aaKnown RBP31.87■■■□□ 2.69
TRIM39-210ENST00000440271 PIK3R4Q99570 1358 aa31.87■■■□□ 2.69
TRIM39-210ENST00000440271 LRP6O75581 1613 aa31.86■■■□□ 2.69
TRIM39-210ENST00000440271 MEX3CQ5U5Q3 659 aaKnown RBP31.86■■■□□ 2.69
TRIM39-210ENST00000440271 UNC13BO14795 1591 aa31.85■■■□□ 2.69
TRIM39-210ENST00000440271 ZNF772Q68DY9 489 aaPredicted RBP31.84■■■□□ 2.69
TRIM39-210ENST00000440271 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.83■■■□□ 2.69
TRIM39-210ENST00000440271 DIP2AQ14689 1571 aa31.82■■■□□ 2.68
TRIM39-210ENST00000440271 AMOTL2Q9Y2J4 779 aa31.82■■■□□ 2.68
TRIM39-210ENST00000440271 E9PCH4 1651 aa31.82■■■□□ 2.68
TRIM39-210ENST00000440271 AHDC1Q5TGY3 1603 aaPredicted RBP31.81■■■□□ 2.68
TRIM39-210ENST00000440271 BRINP3Q76B58 766 aa31.77■■■□□ 2.68
TRIM39-210ENST00000440271 PTPRUQ92729 1446 aa31.76■■■□□ 2.68
TRIM39-210ENST00000440271 TRIM52Q96A61 297 aa31.76■■■□□ 2.67
TRIM39-210ENST00000440271 ROCK1Q13464 1354 aa31.76■■■□□ 2.67
TRIM39-210ENST00000440271 TRPM2O94759 1503 aa31.75■■■□□ 2.67
TRIM39-210ENST00000440271 UPF1Q92900 1129 aaKnown RBP eCLIP31.75■■■□□ 2.67
TRIM39-210ENST00000440271 IQGAP3Q86VI3 1631 aa31.74■■■□□ 2.67
TRIM39-210ENST00000440271 SHPRHQ149N8 1683 aa31.73■■■□□ 2.67
TRIM39-210ENST00000440271 NUP155O75694 1391 aa31.73■■■□□ 2.67
TRIM39-210ENST00000440271 NUTM2BA6NNL0 878 aaPredicted RBP31.7■■■□□ 2.67
TRIM39-210ENST00000440271 NUTM2EB1AL46 878 aaPredicted RBP31.7■■■□□ 2.67
TRIM39-210ENST00000440271 RXRBP28702 533 aa31.7■■■□□ 2.67
TRIM39-210ENST00000440271 NUTM2AQ8IVF1 878 aaPredicted RBP31.7■■■□□ 2.67
TRIM39-210ENST00000440271 DCCP43146 1447 aa31.67■■■□□ 2.66
TRIM39-210ENST00000440271 ITGAEP38570 1179 aa31.62■■■□□ 2.65
TRIM39-210ENST00000440271 ASXL1Q8IXJ9 1541 aa31.62■■■□□ 2.65
TRIM39-210ENST00000440271 SETD5Q9C0A6 1442 aa31.62■■■□□ 2.65
TRIM39-210ENST00000440271 MST1RQ04912 1400 aa31.61■■■□□ 2.65
TRIM39-210ENST00000440271 ZNF326Q5BKZ1 582 aaKnown RBP31.61■■■□□ 2.65
TRIM39-210ENST00000440271 NRXN3Q9Y4C0 1643 aa31.6■■■□□ 2.65
TRIM39-210ENST00000440271 AFF2P51816 1311 aa31.6■■■□□ 2.65
TRIM39-210ENST00000440271 LRRC59Q96AG4 307 aaKnown RBP31.6■■■□□ 2.65
TRIM39-210ENST00000440271 XRN1Q8IZH2 1706 aaKnown RBP31.6■■■□□ 2.65
TRIM39-210ENST00000440271 SETBP1Q9Y6X0 1596 aa31.6■■■□□ 2.65
TRIM39-210ENST00000440271 METP08581 1390 aa31.59■■■□□ 2.65
TRIM39-210ENST00000440271 CDK12Q9NYV4 1490 aaPredicted RBP31.57■■■□□ 2.64
TRIM39-210ENST00000440271 DDX17Q92841 729 aaKnown RBP31.54■■■□□ 2.64
TRIM39-210ENST00000440271 NHSL1Q5SYE7 1610 aa31.53■■■□□ 2.64
TRIM39-210ENST00000440271 ADGRL3Q9HAR2 1447 aa31.5■■■□□ 2.63
TRIM39-210ENST00000440271 SPHKAPQ2M3C7 1700 aa31.5■■■□□ 2.63
TRIM39-210ENST00000440271 C8orf37Q96NL8 207 aa31.5■■■□□ 2.63
TRIM39-210ENST00000440271 PNPLA6Q8IY17 1366 aa31.49■■■□□ 2.63
TRIM39-210ENST00000440271 QTRT2Q9H974 415 aaKnown RBP31.49■■■□□ 2.63
TRIM39-210ENST00000440271 RBM6P78332 1123 aaKnown RBP31.46■■■□□ 2.63
TRIM39-210ENST00000440271 NEXMIFQ5QGS0 1516 aa31.42■■■□□ 2.62
TRIM39-210ENST00000440271 RGS12O14924 1447 aa31.41■■■□□ 2.62
TRIM39-210ENST00000440271 PPARGC1BQ86YN6 1023 aaKnown RBP31.4■■■□□ 2.62
TRIM39-210ENST00000440271 NGLY1Q96IV0 654 aa31.4■■■□□ 2.62
TRIM39-210ENST00000440271 NALCNQ8IZF0 1738 aa31.4■■■□□ 2.62
TRIM39-210ENST00000440271 C1orf167Q5SNV9 1468 aa31.4■■■□□ 2.62
TRIM39-210ENST00000440271 CLTCL1P53675 1640 aa31.39■■■□□ 2.62
TRIM39-210ENST00000440271 ADAMTS2O95450 1211 aa31.39■■■□□ 2.62
TRIM39-210ENST00000440271 ORAI2Q96SN7 254 aa31.35■■■□□ 2.61
TRIM39-210ENST00000440271 SOS2Q07890 1332 aaPredicted RBP31.33■■■□□ 2.61
TRIM39-210ENST00000440271 VGFO15240 615 aaPredicted RBP31.33■■■□□ 2.61
TRIM39-210ENST00000440271 ROBO2Q9HCK4 1378 aa31.32■■■□□ 2.6
TRIM39-210ENST00000440271 PTCH1Q13635 1447 aa31.32■■■□□ 2.6
TRIM39-210ENST00000440271 LAMC1P11047 1609 aa31.29■■■□□ 2.6
TRIM39-210ENST00000440271 USP21Q9UK80 565 aa31.29■■■□□ 2.6
TRIM39-210ENST00000440271 KIF1BO60333 1816 aa31.28■■■□□ 2.6
TRIM39-210ENST00000440271 TRPC5Q9UL62 973 aaPredicted RBP31.25■■■□□ 2.59
TRIM39-210ENST00000440271 FNBP4Q8N3X1 1017 aaPredicted RBP31.24■■■□□ 2.59
TRIM39-210ENST00000440271 RPGRIP1LQ68CZ1 1315 aa31.24■■■□□ 2.59
TRIM39-210ENST00000440271 NAIPQ13075 1403 aa31.23■■■□□ 2.59
TRIM39-210ENST00000440271 ATAD2Q6PL18 1390 aa31.22■■■□□ 2.59
TRIM39-210ENST00000440271 PRAG1Q86YV5 1406 aa31.22■■■□□ 2.59
TRIM39-210ENST00000440271 HFM1A2PYH4 1435 aa31.2■■■□□ 2.59
TRIM39-210ENST00000440271 ESCO1Q5FWF5 840 aa31.16■■■□□ 2.58
TRIM39-210ENST00000440271 ATRNO75882 1429 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms