RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 RIMS2Q9UQ26 1411 aa24.61■■□□□ 1.53
TOM1-207ENST00000439512 MPHOSPH9Q99550 1183 aa24.56■■□□□ 1.52
TOM1-207ENST00000439512 PLEKHG1Q9ULL1 1385 aa24.55■■□□□ 1.52
TOM1-207ENST00000439512 KIF1BO60333 1816 aa24.55■■□□□ 1.52
TOM1-207ENST00000439512 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
TOM1-207ENST00000439512 NWD1Q149M9 1564 aa24.54■■□□□ 1.52
TOM1-207ENST00000439512 HDGFP51858 240 aaKnown RBP24.54■■□□□ 1.52
TOM1-207ENST00000439512 FOXD1Q16676 465 aa24.54■■□□□ 1.52
TOM1-207ENST00000439512 NEXMIFQ5QGS0 1516 aa24.53■■□□□ 1.52
TOM1-207ENST00000439512 LRRC7Q96NW7 1537 aa24.53■■□□□ 1.52
TOM1-207ENST00000439512 ACIN1Q9UKV3 1341 aaKnown RBP24.53■■□□□ 1.52
TOM1-207ENST00000439512 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
TOM1-207ENST00000439512 BCANQ96GW7 911 aa24.52■■□□□ 1.52
TOM1-207ENST00000439512 XIRP1Q702N8 1843 aaKnown RBP24.51■■□□□ 1.51
TOM1-207ENST00000439512 SENP3Q9H4L4 574 aaPredicted RBP24.51■■□□□ 1.51
TOM1-207ENST00000439512 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
TOM1-207ENST00000439512 NUTM2DQ5VT03 806 aaPredicted RBP24.5■■□□□ 1.51
TOM1-207ENST00000439512 ADAMTS13Q76LX8 1427 aa24.5■■□□□ 1.51
TOM1-207ENST00000439512 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
TOM1-207ENST00000439512 DIP2AQ14689 1571 aa24.49■■□□□ 1.51
TOM1-207ENST00000439512 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.48■■□□□ 1.51
TOM1-207ENST00000439512 SETBP1Q9Y6X0 1596 aa24.47■■□□□ 1.51
TOM1-207ENST00000439512 ZNF326Q5BKZ1 582 aaKnown RBP24.47■■□□□ 1.51
TOM1-207ENST00000439512 SLC26A8Q96RN1 970 aa24.47■■□□□ 1.51
TOM1-207ENST00000439512 CHD2O14647 1828 aaKnown RBP24.47■■□□□ 1.51
TOM1-207ENST00000439512 PPLO60437 1756 aa24.43■■□□□ 1.5
TOM1-207ENST00000439512 NKTRP30414 1462 aaKnown RBP24.43■■□□□ 1.5
TOM1-207ENST00000439512 HRCP23327 699 aa24.42■■□□□ 1.5
TOM1-207ENST00000439512 SPATA31E1Q6ZUB1 1445 aa24.41■■□□□ 1.5
TOM1-207ENST00000439512 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
TOM1-207ENST00000439512 SETD1AO15047 1707 aaKnown RBP24.39■■□□□ 1.5
TOM1-207ENST00000439512 KCNA6P17658 529 aa24.39■■□□□ 1.49
TOM1-207ENST00000439512 TBX22Q9Y458 520 aa24.39■■□□□ 1.49
TOM1-207ENST00000439512 CCDC144AA2RUR9 1427 aa24.38■■□□□ 1.49
TOM1-207ENST00000439512 XRN1Q8IZH2 1706 aaKnown RBP24.36■■□□□ 1.49
TOM1-207ENST00000439512 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
TOM1-207ENST00000439512 UBAP1LF5GYI3 381 aa24.34■■□□□ 1.49
TOM1-207ENST00000439512 PTPRUQ92729 1446 aa24.34■■□□□ 1.49
TOM1-207ENST00000439512 TMEM94Q12767 1356 aa24.32■■□□□ 1.48
TOM1-207ENST00000439512 RGL3Q3MIN7 710 aa24.32■■□□□ 1.48
TOM1-207ENST00000439512 RPGRIP1LQ68CZ1 1315 aa24.31■■□□□ 1.48
TOM1-207ENST00000439512 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
TOM1-207ENST00000439512 VGFO15240 615 aaPredicted RBP24.28■■□□□ 1.48
TOM1-207ENST00000439512 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
TOM1-207ENST00000439512 METP08581 1390 aa24.28■■□□□ 1.48
TOM1-207ENST00000439512 RBM33Q96EV2 1170 aaKnown RBP24.25■■□□□ 1.47
TOM1-207ENST00000439512 TOM1O60784 492 aa24.24■■□□□ 1.47
TOM1-207ENST00000439512 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
TOM1-207ENST00000439512 PRAG1Q86YV5 1406 aa24.23■■□□□ 1.47
TOM1-207ENST00000439512 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
TOM1-207ENST00000439512 NRXN1Q9ULB1 1477 aa24.21■■□□□ 1.47
TOM1-207ENST00000439512 ASXL1Q8IXJ9 1541 aa24.2■■□□□ 1.47
TOM1-207ENST00000439512 ADGRF5Q8IZF2 1346 aa24.2■■□□□ 1.46
TOM1-207ENST00000439512 AMOTL2Q9Y2J4 779 aa24.2■■□□□ 1.46
TOM1-207ENST00000439512 MYOM2P54296 1465 aa24.19■■□□□ 1.46
TOM1-207ENST00000439512 PIK3C2GO75747 1445 aa24.19■■□□□ 1.46
TOM1-207ENST00000439512 PIP4K2BP78356 416 aa24.19■■□□□ 1.46
TOM1-207ENST00000439512 SCAF1Q9H7N4 1312 aaKnown RBP24.18■■□□□ 1.46
TOM1-207ENST00000439512 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
TOM1-207ENST00000439512 PTCH1Q13635 1447 aa24.15■■□□□ 1.46
TOM1-207ENST00000439512 NALCNQ8IZF0 1738 aa24.14■■□□□ 1.45
TOM1-207ENST00000439512 MSH6P52701 1360 aa24.14■■□□□ 1.45
TOM1-207ENST00000439512 ROBO1Q9Y6N7 1651 aa24.13■■□□□ 1.45
TOM1-207ENST00000439512 KNDC1Q76NI1 1749 aa24.12■■□□□ 1.45
TOM1-207ENST00000439512 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
TOM1-207ENST00000439512 LAMC1P11047 1609 aa24.11■■□□□ 1.45
TOM1-207ENST00000439512 C14orf37Q86TY3 774 aa24.11■■□□□ 1.45
TOM1-207ENST00000439512 HSPA1LP34931 641 aa24.1■■□□□ 1.45
TOM1-207ENST00000439512 DCCP43146 1447 aa24.1■■□□□ 1.45
TOM1-207ENST00000439512 ROBO2Q9HCK4 1378 aa24.08■■□□□ 1.45
TOM1-207ENST00000439512 TECPR2O15040 1411 aa24.08■■□□□ 1.44
TOM1-207ENST00000439512 ADGRL3Q9HAR2 1447 aa24.08■■□□□ 1.44
TOM1-207ENST00000439512 DHX57Q6P158 1386 aaKnown RBP24.06■■□□□ 1.44
TOM1-207ENST00000439512 KDM2AQ9Y2K7 1162 aa24.06■■□□□ 1.44
TOM1-207ENST00000439512 DCAF11Q8TEB1 546 aa24.05■■□□□ 1.44
TOM1-207ENST00000439512 C19orf44Q9H6X5 657 aa24.04■■□□□ 1.44
TOM1-207ENST00000439512 ADGRB1O14514 1584 aa24.03■■□□□ 1.44
TOM1-207ENST00000439512 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
TOM1-207ENST00000439512 TMEM132EQ6IEE7 984 aa24.02■■□□□ 1.44
TOM1-207ENST00000439512 C14orf93Q9H972 538 aaKnown RBP24.01■■□□□ 1.43
TOM1-207ENST00000439512 MST1RQ04912 1400 aa24.01■■□□□ 1.43
TOM1-207ENST00000439512 CFAP70Q5T0N1 1121 aa24■■□□□ 1.43
TOM1-207ENST00000439512 SLAIN2Q9P270 581 aa24■■□□□ 1.43
TOM1-207ENST00000439512 STK26Q9P289 416 aa24■■□□□ 1.43
TOM1-207ENST00000439512 ATF3P18847 181 aa23.99■■□□□ 1.43
TOM1-207ENST00000439512 CADPS2Q86UW7 1296 aa23.99■■□□□ 1.43
TOM1-207ENST00000439512 ABCC11Q96J66 1382 aa23.99■■□□□ 1.43
TOM1-207ENST00000439512 YTHDC2Q9H6S0 1430 aaKnown RBP23.99■■□□□ 1.43
TOM1-207ENST00000439512 COL16A1Q07092 1604 aaPredicted RBP23.97■■□□□ 1.43
TOM1-207ENST00000439512 AHDC1Q5TGY3 1603 aaPredicted RBP23.97■■□□□ 1.43
TOM1-207ENST00000439512 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
TOM1-207ENST00000439512 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
TOM1-207ENST00000439512 SIN3AQ96ST3 1273 aa23.96■■□□□ 1.43
TOM1-207ENST00000439512 PHLPP1O60346 1717 aa23.96■■□□□ 1.43
TOM1-207ENST00000439512 MED1Q15648 1581 aaPredicted RBP23.95■■□□□ 1.42
TOM1-207ENST00000439512 NEUROD1Q13562 356 aa23.94■■□□□ 1.42
TOM1-207ENST00000439512 NHSL1Q5SYE7 1610 aa23.93■■□□□ 1.42
TOM1-207ENST00000439512 DLC1Q96QB1 1528 aa23.93■■□□□ 1.42
TOM1-207ENST00000439512 PLEKHH1Q9ULM0 1364 aa23.92■■□□□ 1.42
TOM1-207ENST00000439512 KIAA1210Q9ULL0 1709 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms