RNA–Protein interactions for RNA: ENST00000437613.1

LSG1-203, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-203ENST00000437613 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
LSG1-203ENST00000437613 SCAF11Q99590 1463 aaKnown RBP13.89□□□□□ -0.19
LSG1-203ENST00000437613 NPHP4O75161 1426 aaPredicted RBP13.89□□□□□ -0.19
LSG1-203ENST00000437613 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
LSG1-203ENST00000437613 MED14O60244 1454 aa13.87□□□□□ -0.19
LSG1-203ENST00000437613 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
LSG1-203ENST00000437613 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
LSG1-203ENST00000437613 ZFYVE9O95405 1425 aa13.86□□□□□ -0.19
LSG1-203ENST00000437613 SLC26A8Q96RN1 970 aa13.85□□□□□ -0.19
LSG1-203ENST00000437613 KIF1BO60333 1816 aa13.85□□□□□ -0.19
LSG1-203ENST00000437613 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
LSG1-203ENST00000437613 NEURL4Q96JN8 1562 aa13.84□□□□□ -0.19
LSG1-203ENST00000437613 MYO5BQ9ULV0 1848 aa13.84□□□□□ -0.19
LSG1-203ENST00000437613 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
LSG1-203ENST00000437613 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.19
LSG1-203ENST00000437613 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
LSG1-203ENST00000437613 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
LSG1-203ENST00000437613 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
LSG1-203ENST00000437613 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
LSG1-203ENST00000437613 ZNF335Q9H4Z2 1342 aaPredicted RBP13.81□□□□□ -0.2
LSG1-203ENST00000437613 IQGAP1P46940 1657 aa13.8□□□□□ -0.2
LSG1-203ENST00000437613 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
LSG1-203ENST00000437613 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
LSG1-203ENST00000437613 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
LSG1-203ENST00000437613 KCNA6P17658 529 aa13.77□□□□□ -0.21
LSG1-203ENST00000437613 ADGRF5Q8IZF2 1346 aa13.77□□□□□ -0.21
LSG1-203ENST00000437613 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
LSG1-203ENST00000437613 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
LSG1-203ENST00000437613 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
LSG1-203ENST00000437613 CCER1Q8TC90 406 aaPredicted RBP13.73□□□□□ -0.21
LSG1-203ENST00000437613 AMOTL2Q9Y2J4 779 aa13.73□□□□□ -0.21
LSG1-203ENST00000437613 PIK3R4Q99570 1358 aa13.72□□□□□ -0.21
LSG1-203ENST00000437613 LTBP4Q8N2S1 1624 aa13.72□□□□□ -0.21
LSG1-203ENST00000437613 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
LSG1-203ENST00000437613 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
LSG1-203ENST00000437613 C14orf93Q9H972 538 aaKnown RBP13.72□□□□□ -0.21
LSG1-203ENST00000437613 PPLO60437 1756 aa13.72□□□□□ -0.21
LSG1-203ENST00000437613 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
LSG1-203ENST00000437613 METP08581 1390 aa13.71□□□□□ -0.22
LSG1-203ENST00000437613 CFAP70Q5T0N1 1121 aa13.7□□□□□ -0.22
LSG1-203ENST00000437613 CPS1P31327 1500 aa13.69□□□□□ -0.22
LSG1-203ENST00000437613 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
LSG1-203ENST00000437613 DIP2AQ14689 1571 aa13.69□□□□□ -0.22
LSG1-203ENST00000437613 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
LSG1-203ENST00000437613 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
LSG1-203ENST00000437613 MYOM2P54296 1465 aa13.68□□□□□ -0.22
LSG1-203ENST00000437613 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
LSG1-203ENST00000437613 PIK3C2GO75747 1445 aa13.68□□□□□ -0.22
LSG1-203ENST00000437613 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
LSG1-203ENST00000437613 IFT172Q9UG01 1749 aa13.67□□□□□ -0.22
LSG1-203ENST00000437613 STK26Q9P289 416 aa13.67□□□□□ -0.22
LSG1-203ENST00000437613 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
LSG1-203ENST00000437613 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
LSG1-203ENST00000437613 PTPRUQ92729 1446 aa13.66□□□□□ -0.22
LSG1-203ENST00000437613 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
LSG1-203ENST00000437613 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
LSG1-203ENST00000437613 TMEM94Q12767 1356 aa13.65□□□□□ -0.22
LSG1-203ENST00000437613 STRCP1A6NGW2 1772 aa13.65□□□□□ -0.22
LSG1-203ENST00000437613 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
LSG1-203ENST00000437613 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
LSG1-203ENST00000437613 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
LSG1-203ENST00000437613 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
LSG1-203ENST00000437613 IQSEC2Q5JU85 1478 aa13.62□□□□□ -0.23
LSG1-203ENST00000437613 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
LSG1-203ENST00000437613 TOM1O60784 492 aa13.62□□□□□ -0.23
LSG1-203ENST00000437613 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
LSG1-203ENST00000437613 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
LSG1-203ENST00000437613 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
LSG1-203ENST00000437613 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
LSG1-203ENST00000437613 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
LSG1-203ENST00000437613 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
LSG1-203ENST00000437613 ROBO2Q9HCK4 1378 aa13.6□□□□□ -0.23
LSG1-203ENST00000437613 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
LSG1-203ENST00000437613 SIRT1Q96EB6 747 aa13.6□□□□□ -0.23
LSG1-203ENST00000437613 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
LSG1-203ENST00000437613 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
LSG1-203ENST00000437613 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
LSG1-203ENST00000437613 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
LSG1-203ENST00000437613 TRAK1Q9UPV9 953 aa13.59□□□□□ -0.23
LSG1-203ENST00000437613 MSH6P52701 1360 aa13.58□□□□□ -0.23
LSG1-203ENST00000437613 ATF3P18847 181 aa13.58□□□□□ -0.24
LSG1-203ENST00000437613 POGKQ9P215 609 aa13.58□□□□□ -0.24
LSG1-203ENST00000437613 LAMC1P11047 1609 aa13.57□□□□□ -0.24
LSG1-203ENST00000437613 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
LSG1-203ENST00000437613 PIP4K2BP78356 416 aa13.57□□□□□ -0.24
LSG1-203ENST00000437613 PTCH1Q13635 1447 aa13.56□□□□□ -0.24
LSG1-203ENST00000437613 ASXL1Q8IXJ9 1541 aa13.56□□□□□ -0.24
LSG1-203ENST00000437613 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
LSG1-203ENST00000437613 PRAM1Q96QH2 718 aa13.56□□□□□ -0.24
LSG1-203ENST00000437613 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
LSG1-203ENST00000437613 TECPR2O15040 1411 aa13.56□□□□□ -0.24
LSG1-203ENST00000437613 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
LSG1-203ENST00000437613 ADGRB1O14514 1584 aa13.54□□□□□ -0.24
LSG1-203ENST00000437613 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
LSG1-203ENST00000437613 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
LSG1-203ENST00000437613 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
LSG1-203ENST00000437613 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
LSG1-203ENST00000437613 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
LSG1-203ENST00000437613 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
LSG1-203ENST00000437613 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms