RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
PDLIM2-211ENST00000436754 ZFYVE9O95405 1425 aa16.72■□□□□ 0.27
PDLIM2-211ENST00000436754 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
PDLIM2-211ENST00000436754 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
PDLIM2-211ENST00000436754 UNC13BO14795 1591 aa16.7■□□□□ 0.26
PDLIM2-211ENST00000436754 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-211ENST00000436754 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM2-211ENST00000436754 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
PDLIM2-211ENST00000436754 GCC2Q8IWJ2 1684 aa16.69■□□□□ 0.26
PDLIM2-211ENST00000436754 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
PDLIM2-211ENST00000436754 BCANQ96GW7 911 aa16.69■□□□□ 0.26
PDLIM2-211ENST00000436754 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
PDLIM2-211ENST00000436754 RIMS2Q9UQ26 1411 aa16.68■□□□□ 0.26
PDLIM2-211ENST00000436754 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-211ENST00000436754 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-211ENST00000436754 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
PDLIM2-211ENST00000436754 MSH6P52701 1360 aa16.65■□□□□ 0.26
PDLIM2-211ENST00000436754 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-211ENST00000436754 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
PDLIM2-211ENST00000436754 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-211ENST00000436754 E9PCH4 1651 aa16.65■□□□□ 0.26
PDLIM2-211ENST00000436754 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
PDLIM2-211ENST00000436754 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
PDLIM2-211ENST00000436754 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-211ENST00000436754 NUP155O75694 1391 aa16.64■□□□□ 0.25
PDLIM2-211ENST00000436754 PIK3R4Q99570 1358 aa16.63■□□□□ 0.25
PDLIM2-211ENST00000436754 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
PDLIM2-211ENST00000436754 ADAMTS13Q76LX8 1427 aa16.62■□□□□ 0.25
PDLIM2-211ENST00000436754 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-211ENST00000436754 DIP2AQ14689 1571 aa16.59■□□□□ 0.25
PDLIM2-211ENST00000436754 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
PDLIM2-211ENST00000436754 NAIPQ13075 1403 aa16.56■□□□□ 0.24
PDLIM2-211ENST00000436754 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
PDLIM2-211ENST00000436754 CADPS2Q86UW7 1296 aa16.56■□□□□ 0.24
PDLIM2-211ENST00000436754 JCADQ9P266 1359 aa16.54■□□□□ 0.24
PDLIM2-211ENST00000436754 AMOTL2Q9Y2J4 779 aa16.54■□□□□ 0.24
PDLIM2-211ENST00000436754 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
PDLIM2-211ENST00000436754 TRPM2O94759 1503 aa16.53■□□□□ 0.24
PDLIM2-211ENST00000436754 ATF3P18847 181 aa16.52■□□□□ 0.24
PDLIM2-211ENST00000436754 POTEAQ6S8J7 498 aa16.52■□□□□ 0.24
PDLIM2-211ENST00000436754 PHLPP1O60346 1717 aa16.52■□□□□ 0.24
PDLIM2-211ENST00000436754 C14orf37Q86TY3 774 aa16.51■□□□□ 0.23
PDLIM2-211ENST00000436754 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
PDLIM2-211ENST00000436754 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
PDLIM2-211ENST00000436754 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-211ENST00000436754 SPHKAPQ2M3C7 1700 aa16.49■□□□□ 0.23
PDLIM2-211ENST00000436754 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
PDLIM2-211ENST00000436754 DCCP43146 1447 aa16.48■□□□□ 0.23
PDLIM2-211ENST00000436754 TRIM52Q96A61 297 aa16.48■□□□□ 0.23
PDLIM2-211ENST00000436754 COL16A1Q07092 1604 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-211ENST00000436754 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
PDLIM2-211ENST00000436754 NRXN3Q9Y4C0 1643 aa16.47■□□□□ 0.23
PDLIM2-211ENST00000436754 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
PDLIM2-211ENST00000436754 BRINP3Q76B58 766 aa16.45■□□□□ 0.22
PDLIM2-211ENST00000436754 METP08581 1390 aa16.44■□□□□ 0.22
PDLIM2-211ENST00000436754 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-211ENST00000436754 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
PDLIM2-211ENST00000436754 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-211ENST00000436754 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
PDLIM2-211ENST00000436754 RPGRIP1LQ68CZ1 1315 aa16.41■□□□□ 0.22
PDLIM2-211ENST00000436754 MST1RQ04912 1400 aa16.4■□□□□ 0.22
PDLIM2-211ENST00000436754 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-211ENST00000436754 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-211ENST00000436754 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
PDLIM2-211ENST00000436754 LRP6O75581 1613 aa16.39■□□□□ 0.21
PDLIM2-211ENST00000436754 KIF1BO60333 1816 aa16.38■□□□□ 0.21
PDLIM2-211ENST00000436754 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
PDLIM2-211ENST00000436754 ADGRL3Q9HAR2 1447 aa16.37■□□□□ 0.21
PDLIM2-211ENST00000436754 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
PDLIM2-211ENST00000436754 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-211ENST00000436754 LRRC59Q96AG4 307 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-211ENST00000436754 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
PDLIM2-211ENST00000436754 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
PDLIM2-211ENST00000436754 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
PDLIM2-211ENST00000436754 RXRBP28702 533 aa16.31■□□□□ 0.2
PDLIM2-211ENST00000436754 FOXD1Q16676 465 aa16.31■□□□□ 0.2
PDLIM2-211ENST00000436754 MPHOSPH9Q99550 1183 aa16.31■□□□□ 0.2
PDLIM2-211ENST00000436754 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-211ENST00000436754 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 ACIN1Q9UKV3 1341 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 NALCNQ8IZF0 1738 aa16.3■□□□□ 0.2
PDLIM2-211ENST00000436754 LAMC1P11047 1609 aa16.28■□□□□ 0.2
PDLIM2-211ENST00000436754 CDK12Q9NYV4 1490 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-211ENST00000436754 PNPLA6Q8IY17 1366 aa16.27■□□□□ 0.2
PDLIM2-211ENST00000436754 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-211ENST00000436754 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-211ENST00000436754 PPLO60437 1756 aa16.27■□□□□ 0.2
PDLIM2-211ENST00000436754 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
PDLIM2-211ENST00000436754 AFF2P51816 1311 aa16.26■□□□□ 0.19
PDLIM2-211ENST00000436754 UPF1Q92900 1129 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDLIM2-211ENST00000436754 ORAI2Q96SN7 254 aa16.26■□□□□ 0.19
PDLIM2-211ENST00000436754 ADGRF5Q8IZF2 1346 aa16.23■□□□□ 0.19
PDLIM2-211ENST00000436754 SPATA31E1Q6ZUB1 1445 aa16.23■□□□□ 0.19
PDLIM2-211ENST00000436754 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
PDLIM2-211ENST00000436754 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms