RNA–Protein interactions for RNA: ENST00000435981.5

LINC01393-202, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 1 (best) BASIC

Gene LINC01393, Length 1,187 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-202ENST00000435981 WIZO95785 1651 aa12.51□□□□□ -0.41
LINC01393-202ENST00000435981 LCE2AQ5TA79 106 aaPredicted RBP12.5□□□□□ -0.41
LINC01393-202ENST00000435981 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
LINC01393-202ENST00000435981 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
LINC01393-202ENST00000435981 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
LINC01393-202ENST00000435981 NPDC1Q9NQX5 325 aaPredicted RBP12.49□□□□□ -0.41
LINC01393-202ENST00000435981 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
LINC01393-202ENST00000435981 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
LINC01393-202ENST00000435981 MYT1Q01538 1121 aa12.47□□□□□ -0.41
LINC01393-202ENST00000435981 DGAT1O75907 488 aa12.46□□□□□ -0.41
LINC01393-202ENST00000435981 GGCXP38435 758 aa12.46□□□□□ -0.41
LINC01393-202ENST00000435981 TTC13Q8NBP0 860 aa12.46□□□□□ -0.41
LINC01393-202ENST00000435981 PKDCCQ504Y2 493 aa12.45□□□□□ -0.42
LINC01393-202ENST00000435981 PADI6Q6TGC4 694 aa12.45□□□□□ -0.42
LINC01393-202ENST00000435981 POTECB2RU33 542 aa12.44□□□□□ -0.42
LINC01393-202ENST00000435981 TSHZ2Q9NRE2 1034 aa12.44□□□□□ -0.42
LINC01393-202ENST00000435981 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
LINC01393-202ENST00000435981 RNF40O75150 1001 aa12.41□□□□□ -0.42
LINC01393-202ENST00000435981 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
LINC01393-202ENST00000435981 TRIM67Q6ZTA4 783 aa12.41□□□□□ -0.42
LINC01393-202ENST00000435981 ZNF516Q92618 1163 aa12.41□□□□□ -0.42
LINC01393-202ENST00000435981 STK17AQ9UEE5 414 aa12.41□□□□□ -0.42
LINC01393-202ENST00000435981 APLP1P51693 650 aa12.4□□□□□ -0.42
LINC01393-202ENST00000435981 TOP2AP11388 1531 aaKnown RBP12.4□□□□□ -0.42
LINC01393-202ENST00000435981 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
LINC01393-202ENST00000435981 KCNV2Q8TDN2 545 aa12.38□□□□□ -0.43
LINC01393-202ENST00000435981 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
LINC01393-202ENST00000435981 HDGFP51858 240 aaKnown RBP12.36□□□□□ -0.43
LINC01393-202ENST00000435981 EYA1Q99502 592 aa12.36□□□□□ -0.43
LINC01393-202ENST00000435981 LOC100996750A0A140TA64 210 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 PRR20EP86478 221 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 PRR20CP86479 221 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 PRR20DP86480 221 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 PRR20BP86481 221 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 PRR20AP86496 221 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 KRTAP4-6Q9BYQ5 205 aa12.34□□□□□ -0.43
LINC01393-202ENST00000435981 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
LINC01393-202ENST00000435981 SLC19A1P41440 591 aa12.3□□□□□ -0.44
LINC01393-202ENST00000435981 PTGDRQ13258 359 aa12.29□□□□□ -0.44
LINC01393-202ENST00000435981 COPS2P61201 443 aa12.28□□□□□ -0.44
LINC01393-202ENST00000435981 WFS1O76024 890 aa12.26□□□□□ -0.45
LINC01393-202ENST00000435981 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
LINC01393-202ENST00000435981 ZNF598Q86UK7 904 aaKnown RBP12.26□□□□□ -0.45
LINC01393-202ENST00000435981 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
LINC01393-202ENST00000435981 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
LINC01393-202ENST00000435981 WIPF1O43516 503 aa12.23□□□□□ -0.45
LINC01393-202ENST00000435981 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
LINC01393-202ENST00000435981 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
LINC01393-202ENST00000435981 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
LINC01393-202ENST00000435981 AAASQ9NRG9 546 aa12.22□□□□□ -0.45
LINC01393-202ENST00000435981 ADGRG1Q9Y653 693 aa12.22□□□□□ -0.45
LINC01393-202ENST00000435981 DNAJB2P25686 324 aa12.21□□□□□ -0.45
LINC01393-202ENST00000435981 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
LINC01393-202ENST00000435981 ZPR1O75312 459 aa12.2□□□□□ -0.46
LINC01393-202ENST00000435981 SLC4A3P48751 1232 aa12.2□□□□□ -0.46
LINC01393-202ENST00000435981 EMID1Q96A84 441 aaPredicted RBP12.2□□□□□ -0.46
LINC01393-202ENST00000435981 LAMC3Q9Y6N6 1575 aa12.19□□□□□ -0.46
LINC01393-202ENST00000435981 RBM46Q8TBY0 533 aaKnown RBP12.19□□□□□ -0.46
LINC01393-202ENST00000435981 TMEM134Q9H6X4 195 aa12.19□□□□□ -0.46
LINC01393-202ENST00000435981 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
LINC01393-202ENST00000435981 RNF223E7ERA6 249 aa12.18□□□□□ -0.46
LINC01393-202ENST00000435981 SEMA3EO15041 775 aa12.18□□□□□ -0.46
LINC01393-202ENST00000435981 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
LINC01393-202ENST00000435981 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
LINC01393-202ENST00000435981 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
LINC01393-202ENST00000435981 ST8SIA5O15466 376 aa12.16□□□□□ -0.46
LINC01393-202ENST00000435981 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
LINC01393-202ENST00000435981 GDF9O60383 454 aa12.15□□□□□ -0.46
LINC01393-202ENST00000435981 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
LINC01393-202ENST00000435981 P3H3Q8IVL6 736 aa12.14□□□□□ -0.47
LINC01393-202ENST00000435981 PRDM2Q13029 1718 aa12.14□□□□□ -0.47
LINC01393-202ENST00000435981 PDS5BQ9NTI5 1447 aa12.13□□□□□ -0.47
LINC01393-202ENST00000435981 NESP48681 1621 aa12.13□□□□□ -0.47
LINC01393-202ENST00000435981 TLL1O43897 1013 aa12.13□□□□□ -0.47
LINC01393-202ENST00000435981 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
LINC01393-202ENST00000435981 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
LINC01393-202ENST00000435981 FCHSD2O94868 740 aa12.12□□□□□ -0.47
LINC01393-202ENST00000435981 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
LINC01393-202ENST00000435981 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
LINC01393-202ENST00000435981 CFTRP13569 1480 aa12.11□□□□□ -0.47
LINC01393-202ENST00000435981 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
LINC01393-202ENST00000435981 SLC10A3P09131 477 aa12.11□□□□□ -0.47
LINC01393-202ENST00000435981 CFHP08603 1231 aa12.1□□□□□ -0.47
LINC01393-202ENST00000435981 TNFRSF10AO00220 468 aa12.09□□□□□ -0.47
LINC01393-202ENST00000435981 KMT5BQ4FZB7 885 aa12.08□□□□□ -0.48
LINC01393-202ENST00000435981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
LINC01393-202ENST00000435981 LIAT1Q6ZQX7 453 aa12.07□□□□□ -0.48
LINC01393-202ENST00000435981 PXYLP1Q8TE99 480 aa12.07□□□□□ -0.48
LINC01393-202ENST00000435981 PPEF1O14829 653 aaPredicted RBP12.05□□□□□ -0.48
LINC01393-202ENST00000435981 FANCD2Q9BXW9 1451 aa12.05□□□□□ -0.48
LINC01393-202ENST00000435981 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
LINC01393-202ENST00000435981 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
LINC01393-202ENST00000435981 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
LINC01393-202ENST00000435981 C11orf95C9JLR9 678 aaPredicted RBP12.04□□□□□ -0.48
LINC01393-202ENST00000435981 S1PR4O95977 384 aa12.04□□□□□ -0.48
LINC01393-202ENST00000435981 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
LINC01393-202ENST00000435981 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
LINC01393-202ENST00000435981 OATP04181 439 aa12.02□□□□□ -0.49
LINC01393-202ENST00000435981 FECHP22830 423 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms