RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 NUP155O75694 1391 aa30.76■■■□□ 2.51
HLA-B-250ENST00000434333 SLC26A8Q96RN1 970 aa30.74■■■□□ 2.51
HLA-B-250ENST00000434333 RIMS2Q9UQ26 1411 aa30.72■■■□□ 2.51
HLA-B-250ENST00000434333 NWD1Q149M9 1564 aa30.71■■■□□ 2.51
HLA-B-250ENST00000434333 KCNA6P17658 529 aa30.7■■■□□ 2.51
HLA-B-250ENST00000434333 PLEKHG1Q9ULL1 1385 aa30.69■■■□□ 2.5
HLA-B-250ENST00000434333 TMEM94Q12767 1356 aa30.66■■■□□ 2.5
HLA-B-250ENST00000434333 NKTRP30414 1462 aaKnown RBP30.64■■■□□ 2.5
HLA-B-250ENST00000434333 NAIPQ13075 1403 aa30.63■■■□□ 2.49
HLA-B-250ENST00000434333 CHGAP10645 457 aaKnown RBP30.62■■■□□ 2.49
HLA-B-250ENST00000434333 SENP3Q9H4L4 574 aaPredicted RBP30.62■■■□□ 2.49
HLA-B-250ENST00000434333 MED1Q15648 1581 aaPredicted RBP30.62■■■□□ 2.49
HLA-B-250ENST00000434333 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
HLA-B-250ENST00000434333 CHD2O14647 1828 aaKnown RBP30.6■■■□□ 2.49
HLA-B-250ENST00000434333 HDGFP51858 240 aaKnown RBP30.6■■■□□ 2.49
HLA-B-250ENST00000434333 BCANQ96GW7 911 aa30.6■■■□□ 2.49
HLA-B-250ENST00000434333 PPP1R15AO75807 674 aaPredicted RBP30.59■■■□□ 2.49
HLA-B-250ENST00000434333 ADAMTS13Q76LX8 1427 aa30.58■■■□□ 2.49
HLA-B-250ENST00000434333 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.58■■■□□ 2.49
HLA-B-250ENST00000434333 PROSER2Q86WR7 435 aaPredicted RBP30.57■■■□□ 2.48
HLA-B-250ENST00000434333 RBM33Q96EV2 1170 aaKnown RBP30.57■■■□□ 2.48
HLA-B-250ENST00000434333 NUTM2DQ5VT03 806 aaPredicted RBP30.55■■■□□ 2.48
HLA-B-250ENST00000434333 TBX22Q9Y458 520 aa30.54■■■□□ 2.48
HLA-B-250ENST00000434333 DIP2AQ14689 1571 aa30.53■■■□□ 2.48
HLA-B-250ENST00000434333 FAM135BQ49AJ0 1406 aa30.52■■■□□ 2.48
HLA-B-250ENST00000434333 HFM1A2PYH4 1435 aa30.5■■■□□ 2.47
HLA-B-250ENST00000434333 SOCS7O14512 581 aa30.49■■■□□ 2.47
HLA-B-250ENST00000434333 CLTCL1P53675 1640 aa30.48■■■□□ 2.47
HLA-B-250ENST00000434333 TRPM2O94759 1503 aa30.47■■■□□ 2.47
HLA-B-250ENST00000434333 ROBO1Q9Y6N7 1651 aa30.46■■■□□ 2.47
HLA-B-250ENST00000434333 PIK3R4Q99570 1358 aa30.45■■■□□ 2.47
HLA-B-250ENST00000434333 NRXN3Q9Y4C0 1643 aa30.45■■■□□ 2.47
HLA-B-250ENST00000434333 MSH6P52701 1360 aa30.44■■■□□ 2.46
HLA-B-250ENST00000434333 SETBP1Q9Y6X0 1596 aa30.41■■■□□ 2.46
HLA-B-250ENST00000434333 PTPRUQ92729 1446 aa30.41■■■□□ 2.46
HLA-B-250ENST00000434333 NCOA3Q9Y6Q9 1424 aa30.4■■■□□ 2.46
HLA-B-250ENST00000434333 NEXMIFQ5QGS0 1516 aa30.38■■■□□ 2.45
HLA-B-250ENST00000434333 ZNF326Q5BKZ1 582 aaKnown RBP30.35■■■□□ 2.45
HLA-B-250ENST00000434333 XRN1Q8IZH2 1706 aaKnown RBP30.35■■■□□ 2.45
HLA-B-250ENST00000434333 KIF1BO60333 1816 aa30.35■■■□□ 2.45
HLA-B-250ENST00000434333 TRIM52Q96A61 297 aa30.34■■■□□ 2.45
HLA-B-250ENST00000434333 SLAIN2Q9P270 581 aa30.33■■■□□ 2.45
HLA-B-250ENST00000434333 AMOTL2Q9Y2J4 779 aa30.33■■■□□ 2.45
HLA-B-250ENST00000434333 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.32■■■□□ 2.44
HLA-B-250ENST00000434333 SLC4A1APQ9BWU0 796 aaKnown RBP30.29■■■□□ 2.44
HLA-B-250ENST00000434333 METP08581 1390 aa30.28■■■□□ 2.44
HLA-B-250ENST00000434333 PHF23Q9BUL5 403 aaPredicted RBP30.28■■■□□ 2.44
HLA-B-250ENST00000434333 PHLPP1O60346 1717 aa30.25■■■□□ 2.43
HLA-B-250ENST00000434333 C14orf37Q86TY3 774 aa30.25■■■□□ 2.43
HLA-B-250ENST00000434333 C19orf44Q9H6X5 657 aa30.25■■■□□ 2.43
HLA-B-250ENST00000434333 COL16A1Q07092 1604 aaPredicted RBP30.22■■■□□ 2.43
HLA-B-250ENST00000434333 CADPS2Q86UW7 1296 aa30.21■■■□□ 2.43
HLA-B-250ENST00000434333 SETD1AO15047 1707 aaKnown RBP30.21■■■□□ 2.43
HLA-B-250ENST00000434333 RGS17Q9UGC6 210 aaPredicted RBP30.2■■■□□ 2.43
HLA-B-250ENST00000434333 DCCP43146 1447 aa30.19■■■□□ 2.42
HLA-B-250ENST00000434333 ATF3P18847 181 aa30.18■■■□□ 2.42
HLA-B-250ENST00000434333 FOXD1Q16676 465 aa30.18■■■□□ 2.42
HLA-B-250ENST00000434333 PPLO60437 1756 aa30.17■■■□□ 2.42
HLA-B-250ENST00000434333 AHDC1Q5TGY3 1603 aaPredicted RBP30.16■■■□□ 2.42
HLA-B-250ENST00000434333 VGFO15240 615 aaPredicted RBP30.14■■■□□ 2.42
HLA-B-250ENST00000434333 RPGRIP1LQ68CZ1 1315 aa30.14■■■□□ 2.42
HLA-B-250ENST00000434333 JCADQ9P266 1359 aa30.14■■■□□ 2.41
HLA-B-250ENST00000434333 NALCNQ8IZF0 1738 aa30.12■■■□□ 2.41
HLA-B-250ENST00000434333 MST1RQ04912 1400 aa30.11■■■□□ 2.41
HLA-B-250ENST00000434333 ADGRL3Q9HAR2 1447 aa30.11■■■□□ 2.41
HLA-B-250ENST00000434333 MPHOSPH9Q99550 1183 aa30.1■■■□□ 2.41
HLA-B-250ENST00000434333 BRINP3Q76B58 766 aa30.09■■■□□ 2.41
HLA-B-250ENST00000434333 PTCH1Q13635 1447 aa30.08■■■□□ 2.41
HLA-B-250ENST00000434333 PRAG1Q86YV5 1406 aa30.08■■■□□ 2.41
HLA-B-250ENST00000434333 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
HLA-B-250ENST00000434333 SPATA31E1Q6ZUB1 1445 aa30.07■■■□□ 2.4
HLA-B-250ENST00000434333 ASXL1Q8IXJ9 1541 aa30.06■■■□□ 2.4
HLA-B-250ENST00000434333 IFT172Q9UG01 1749 aa30.04■■■□□ 2.4
HLA-B-250ENST00000434333 ROBO2Q9HCK4 1378 aa30.03■■■□□ 2.4
HLA-B-250ENST00000434333 SHPRHQ149N8 1683 aa30.03■■■□□ 2.4
HLA-B-250ENST00000434333 LRP6O75581 1613 aa30.02■■■□□ 2.4
HLA-B-250ENST00000434333 NHSL1Q5SYE7 1610 aa30.02■■■□□ 2.4
HLA-B-250ENST00000434333 SETD5Q9C0A6 1442 aa30.02■■■□□ 2.4
HLA-B-250ENST00000434333 POTEAQ6S8J7 498 aa30■■■□□ 2.39
HLA-B-250ENST00000434333 ADGRF5Q8IZF2 1346 aa29.99■■■□□ 2.39
HLA-B-250ENST00000434333 SPATA31A6Q5VVP1 1343 aa29.97■■■□□ 2.39
HLA-B-250ENST00000434333 RGL3Q3MIN7 710 aa29.96■■■□□ 2.39
HLA-B-250ENST00000434333 ACIN1Q9UKV3 1341 aaKnown RBP29.95■■■□□ 2.38
HLA-B-250ENST00000434333 ANKRD30BQ9BXX2 1392 aa29.94■■■□□ 2.38
HLA-B-250ENST00000434333 C1orf167Q5SNV9 1468 aa29.93■■■□□ 2.38
HLA-B-250ENST00000434333 RAB3GAP2Q9H2M9 1393 aa29.92■■■□□ 2.38
HLA-B-250ENST00000434333 PIK3C2GO75747 1445 aa29.9■■■□□ 2.38
HLA-B-250ENST00000434333 DDX17Q92841 729 aaKnown RBP29.89■■■□□ 2.38
HLA-B-250ENST00000434333 LAMC1P11047 1609 aa29.89■■■□□ 2.37
HLA-B-250ENST00000434333 TECPR2O15040 1411 aa29.88■■■□□ 2.37
HLA-B-250ENST00000434333 KNDC1Q76NI1 1749 aa29.85■■■□□ 2.37
HLA-B-250ENST00000434333 LRPPRCP42704 1394 aaKnown RBP29.84■■■□□ 2.37
HLA-B-250ENST00000434333 CDC42BPGQ6DT37 1551 aa29.84■■■□□ 2.37
HLA-B-250ENST00000434333 NRXN1Q9ULB1 1477 aa29.82■■■□□ 2.36
HLA-B-250ENST00000434333 LRRC59Q96AG4 307 aaKnown RBP29.82■■■□□ 2.36
HLA-B-250ENST00000434333 ORAI2Q96SN7 254 aa29.82■■■□□ 2.36
HLA-B-250ENST00000434333 PNPLA6Q8IY17 1366 aa29.81■■■□□ 2.36
HLA-B-250ENST00000434333 ABCC11Q96J66 1382 aa29.8■■■□□ 2.36
HLA-B-250ENST00000434333 MEX3CQ5U5Q3 659 aaKnown RBP29.8■■■□□ 2.36
HLA-B-250ENST00000434333 TMEM132EQ6IEE7 984 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms