RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
TRAPPC4-202ENST00000434101 SLC4A1APQ9BWU0 796 aaKnown RBP19.75■□□□□ 0.75
TRAPPC4-202ENST00000434101 TRPM2O94759 1503 aa19.75■□□□□ 0.75
TRAPPC4-202ENST00000434101 KIF1BO60333 1816 aa19.74■□□□□ 0.75
TRAPPC4-202ENST00000434101 BCANQ96GW7 911 aa19.74■□□□□ 0.75
TRAPPC4-202ENST00000434101 PLEKHG1Q9ULL1 1385 aa19.73■□□□□ 0.75
TRAPPC4-202ENST00000434101 UBAP1LF5GYI3 381 aa19.72■□□□□ 0.75
TRAPPC4-202ENST00000434101 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
TRAPPC4-202ENST00000434101 SLC26A8Q96RN1 970 aa19.7■□□□□ 0.74
TRAPPC4-202ENST00000434101 LRRC7Q96NW7 1537 aa19.7■□□□□ 0.74
TRAPPC4-202ENST00000434101 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
TRAPPC4-202ENST00000434101 TOM1O60784 492 aa19.68■□□□□ 0.74
TRAPPC4-202ENST00000434101 KCNA6P17658 529 aa19.67■□□□□ 0.74
TRAPPC4-202ENST00000434101 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
TRAPPC4-202ENST00000434101 DIP2AQ14689 1571 aa19.66■□□□□ 0.74
TRAPPC4-202ENST00000434101 CHD2O14647 1828 aaKnown RBP19.65■□□□□ 0.74
TRAPPC4-202ENST00000434101 NUTM2DQ5VT03 806 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC4-202ENST00000434101 NWD1Q149M9 1564 aa19.65■□□□□ 0.74
TRAPPC4-202ENST00000434101 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
TRAPPC4-202ENST00000434101 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
TRAPPC4-202ENST00000434101 TBX22Q9Y458 520 aa19.64■□□□□ 0.73
TRAPPC4-202ENST00000434101 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
TRAPPC4-202ENST00000434101 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC4-202ENST00000434101 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
TRAPPC4-202ENST00000434101 ADAMTS13Q76LX8 1427 aa19.6■□□□□ 0.73
TRAPPC4-202ENST00000434101 RAB3GAP2Q9H2M9 1393 aa19.6■□□□□ 0.73
TRAPPC4-202ENST00000434101 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
TRAPPC4-202ENST00000434101 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
TRAPPC4-202ENST00000434101 FOXD1Q16676 465 aa19.59■□□□□ 0.73
TRAPPC4-202ENST00000434101 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC4-202ENST00000434101 CCDC144AA2RUR9 1427 aa19.59■□□□□ 0.73
TRAPPC4-202ENST00000434101 SETBP1Q9Y6X0 1596 aa19.58■□□□□ 0.73
TRAPPC4-202ENST00000434101 PIP4K2BP78356 416 aa19.58■□□□□ 0.72
TRAPPC4-202ENST00000434101 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
TRAPPC4-202ENST00000434101 NRXN3Q9Y4C0 1643 aa19.57■□□□□ 0.72
TRAPPC4-202ENST00000434101 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
TRAPPC4-202ENST00000434101 ALKQ9UM73 1620 aa19.55■□□□□ 0.72
TRAPPC4-202ENST00000434101 PPLO60437 1756 aa19.55■□□□□ 0.72
TRAPPC4-202ENST00000434101 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC4-202ENST00000434101 HRCP23327 699 aa19.53■□□□□ 0.72
TRAPPC4-202ENST00000434101 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
TRAPPC4-202ENST00000434101 MSH6P52701 1360 aa19.5■□□□□ 0.71
TRAPPC4-202ENST00000434101 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
TRAPPC4-202ENST00000434101 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-202ENST00000434101 RBM33Q96EV2 1170 aaKnown RBP19.48■□□□□ 0.71
TRAPPC4-202ENST00000434101 SPATA31E1Q6ZUB1 1445 aa19.48■□□□□ 0.71
TRAPPC4-202ENST00000434101 HSPA1LP34931 641 aa19.47■□□□□ 0.71
TRAPPC4-202ENST00000434101 PTPRUQ92729 1446 aa19.47■□□□□ 0.71
TRAPPC4-202ENST00000434101 IFT172Q9UG01 1749 aa19.47■□□□□ 0.71
TRAPPC4-202ENST00000434101 RGL3Q3MIN7 710 aa19.46■□□□□ 0.71
TRAPPC4-202ENST00000434101 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
TRAPPC4-202ENST00000434101 METP08581 1390 aa19.45■□□□□ 0.7
TRAPPC4-202ENST00000434101 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
TRAPPC4-202ENST00000434101 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-202ENST00000434101 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
TRAPPC4-202ENST00000434101 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC4-202ENST00000434101 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
TRAPPC4-202ENST00000434101 ROBO1Q9Y6N7 1651 aa19.4■□□□□ 0.7
TRAPPC4-202ENST00000434101 CADPS2Q86UW7 1296 aa19.39■□□□□ 0.69
TRAPPC4-202ENST00000434101 ATF3P18847 181 aa19.38■□□□□ 0.69
TRAPPC4-202ENST00000434101 ADGRF5Q8IZF2 1346 aa19.38■□□□□ 0.69
TRAPPC4-202ENST00000434101 SLAIN2Q9P270 581 aa19.38■□□□□ 0.69
TRAPPC4-202ENST00000434101 DCCP43146 1447 aa19.37■□□□□ 0.69
TRAPPC4-202ENST00000434101 PTCH1Q13635 1447 aa19.36■□□□□ 0.69
TRAPPC4-202ENST00000434101 PRAG1Q86YV5 1406 aa19.35■□□□□ 0.69
TRAPPC4-202ENST00000434101 DISP3Q9P2K9 1392 aa19.35■□□□□ 0.69
TRAPPC4-202ENST00000434101 MYOM2P54296 1465 aa19.35■□□□□ 0.69
TRAPPC4-202ENST00000434101 PIK3C2GO75747 1445 aa19.34■□□□□ 0.69
TRAPPC4-202ENST00000434101 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
TRAPPC4-202ENST00000434101 NALCNQ8IZF0 1738 aa19.33■□□□□ 0.68
TRAPPC4-202ENST00000434101 LAMC1P11047 1609 aa19.33■□□□□ 0.68
TRAPPC4-202ENST00000434101 NRXN1Q9ULB1 1477 aa19.31■□□□□ 0.68
TRAPPC4-202ENST00000434101 PHLPP1O60346 1717 aa19.31■□□□□ 0.68
TRAPPC4-202ENST00000434101 ROBO2Q9HCK4 1378 aa19.31■□□□□ 0.68
TRAPPC4-202ENST00000434101 KNDC1Q76NI1 1749 aa19.29■□□□□ 0.68
TRAPPC4-202ENST00000434101 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-202ENST00000434101 STAC3Q96MF2 364 aa19.28■□□□□ 0.68
TRAPPC4-202ENST00000434101 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-202ENST00000434101 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.68
TRAPPC4-202ENST00000434101 C14orf93Q9H972 538 aaKnown RBP19.27■□□□□ 0.68
TRAPPC4-202ENST00000434101 TECPR2O15040 1411 aa19.26■□□□□ 0.67
TRAPPC4-202ENST00000434101 ABCC11Q96J66 1382 aa19.26■□□□□ 0.67
TRAPPC4-202ENST00000434101 MST1RQ04912 1400 aa19.25■□□□□ 0.67
TRAPPC4-202ENST00000434101 TMEM132EQ6IEE7 984 aa19.25■□□□□ 0.67
TRAPPC4-202ENST00000434101 STK26Q9P289 416 aa19.25■□□□□ 0.67
TRAPPC4-202ENST00000434101 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-202ENST00000434101 DCAF11Q8TEB1 546 aa19.24■□□□□ 0.67
TRAPPC4-202ENST00000434101 AHDC1Q5TGY3 1603 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC4-202ENST00000434101 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
TRAPPC4-202ENST00000434101 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
TRAPPC4-202ENST00000434101 BRINP3Q76B58 766 aa19.23■□□□□ 0.67
TRAPPC4-202ENST00000434101 COL16A1Q07092 1604 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC4-202ENST00000434101 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
TRAPPC4-202ENST00000434101 CDC42BPGQ6DT37 1551 aa19.2■□□□□ 0.66
TRAPPC4-202ENST00000434101 SIRT1Q96EB6 747 aa19.2■□□□□ 0.66
TRAPPC4-202ENST00000434101 JCADQ9P266 1359 aa19.19■□□□□ 0.66
TRAPPC4-202ENST00000434101 NHSL1Q5SYE7 1610 aa19.19■□□□□ 0.66
TRAPPC4-202ENST00000434101 TRIM26Q12899 539 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC4-202ENST00000434101 C1orf167Q5SNV9 1468 aa19.18■□□□□ 0.66
TRAPPC4-202ENST00000434101 WAPLQ7Z5K2 1190 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms