RNA–Protein interactions for RNA: ENST00000433568.5

UBE2F-209, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-209ENST00000433568 PPP1R15AO75807 674 aaPredicted RBP29.41■■■□□ 2.3
UBE2F-209ENST00000433568 STRCP1A6NGW2 1772 aa29.4■■■□□ 2.3
UBE2F-209ENST00000433568 SETD5Q9C0A6 1442 aa29.39■■■□□ 2.3
UBE2F-209ENST00000433568 CLTCL1P53675 1640 aa29.38■■■□□ 2.29
UBE2F-209ENST00000433568 CPS1P31327 1500 aa29.37■■■□□ 2.29
UBE2F-209ENST00000433568 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
UBE2F-209ENST00000433568 TRPM2O94759 1503 aa29.35■■■□□ 2.29
UBE2F-209ENST00000433568 UBAP1LF5GYI3 381 aa29.34■■■□□ 2.29
UBE2F-209ENST00000433568 ZNF326Q5BKZ1 582 aaKnown RBP29.34■■■□□ 2.29
UBE2F-209ENST00000433568 MPHOSPH9Q99550 1183 aa29.34■■■□□ 2.29
UBE2F-209ENST00000433568 RAB3GAP2Q9H2M9 1393 aa29.33■■■□□ 2.29
UBE2F-209ENST00000433568 PLEKHG1Q9ULL1 1385 aa29.32■■■□□ 2.28
UBE2F-209ENST00000433568 LRRC7Q96NW7 1537 aa29.3■■■□□ 2.28
UBE2F-209ENST00000433568 HDGFP51858 240 aaKnown RBP29.3■■■□□ 2.28
UBE2F-209ENST00000433568 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.29■■■□□ 2.28
UBE2F-209ENST00000433568 RBM33Q96EV2 1170 aaKnown RBP29.28■■■□□ 2.28
UBE2F-209ENST00000433568 ADAMTS13Q76LX8 1427 aa29.23■■■□□ 2.27
UBE2F-209ENST00000433568 KCNA6P17658 529 aa29.23■■■□□ 2.27
UBE2F-209ENST00000433568 PIP4K2BP78356 416 aa29.22■■■□□ 2.27
UBE2F-209ENST00000433568 SCAF1Q9H7N4 1312 aaKnown RBP29.21■■■□□ 2.27
UBE2F-209ENST00000433568 TBX22Q9Y458 520 aa29.18■■■□□ 2.26
UBE2F-209ENST00000433568 NEXMIFQ5QGS0 1516 aa29.18■■■□□ 2.26
UBE2F-209ENST00000433568 KIF1BO60333 1816 aa29.17■■■□□ 2.26
UBE2F-209ENST00000433568 PROSER2Q86WR7 435 aaPredicted RBP29.17■■■□□ 2.26
UBE2F-209ENST00000433568 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
UBE2F-209ENST00000433568 TMEM94Q12767 1356 aa29.15■■■□□ 2.26
UBE2F-209ENST00000433568 TOM1O60784 492 aa29.15■■■□□ 2.26
UBE2F-209ENST00000433568 CCDC144AA2RUR9 1427 aa29.13■■■□□ 2.25
UBE2F-209ENST00000433568 RGL3Q3MIN7 710 aa29.13■■■□□ 2.25
UBE2F-209ENST00000433568 NWD1Q149M9 1564 aa29.13■■■□□ 2.25
UBE2F-209ENST00000433568 XIRP1Q702N8 1843 aaKnown RBP29.13■■■□□ 2.25
UBE2F-209ENST00000433568 NRXN3Q9Y4C0 1643 aa29.12■■■□□ 2.25
UBE2F-209ENST00000433568 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
UBE2F-209ENST00000433568 CHD2O14647 1828 aaKnown RBP29.08■■■□□ 2.25
UBE2F-209ENST00000433568 METP08581 1390 aa29.07■■■□□ 2.24
UBE2F-209ENST00000433568 NKTRP30414 1462 aaKnown RBP29.07■■■□□ 2.24
UBE2F-209ENST00000433568 SETBP1Q9Y6X0 1596 aa29.07■■■□□ 2.24
UBE2F-209ENST00000433568 DIP2AQ14689 1571 aa29.06■■■□□ 2.24
UBE2F-209ENST00000433568 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
UBE2F-209ENST00000433568 AMOTL2Q9Y2J4 779 aa29.05■■■□□ 2.24
UBE2F-209ENST00000433568 SPATA31E1Q6ZUB1 1445 aa29.04■■■□□ 2.24
UBE2F-209ENST00000433568 RPGRIP1LQ68CZ1 1315 aa29.02■■■□□ 2.24
UBE2F-209ENST00000433568 VGFO15240 615 aaPredicted RBP29.02■■■□□ 2.24
UBE2F-209ENST00000433568 HSPA1LP34931 641 aa29.02■■■□□ 2.24
UBE2F-209ENST00000433568 PIK3R4Q99570 1358 aa29.01■■■□□ 2.23
UBE2F-209ENST00000433568 ADGRF5Q8IZF2 1346 aa29■■■□□ 2.23
UBE2F-209ENST00000433568 PPLO60437 1756 aa29■■■□□ 2.23
UBE2F-209ENST00000433568 HRCP23327 699 aa28.99■■■□□ 2.23
UBE2F-209ENST00000433568 C14orf37Q86TY3 774 aa28.97■■■□□ 2.23
UBE2F-209ENST00000433568 ANKRD30BQ9BXX2 1392 aa28.97■■■□□ 2.23
UBE2F-209ENST00000433568 MSH6P52701 1360 aa28.94■■■□□ 2.22
UBE2F-209ENST00000433568 XRN1Q8IZH2 1706 aaKnown RBP28.92■■■□□ 2.22
UBE2F-209ENST00000433568 SETD1AO15047 1707 aaKnown RBP28.89■■■□□ 2.22
UBE2F-209ENST00000433568 IFT172Q9UG01 1749 aa28.88■■■□□ 2.21
UBE2F-209ENST00000433568 SLAIN2Q9P270 581 aa28.84■■■□□ 2.21
UBE2F-209ENST00000433568 TMEM132EQ6IEE7 984 aa28.83■■■□□ 2.21
UBE2F-209ENST00000433568 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
UBE2F-209ENST00000433568 ROBO2Q9HCK4 1378 aa28.83■■■□□ 2.21
UBE2F-209ENST00000433568 NCOA3Q9Y6Q9 1424 aa28.83■■■□□ 2.21
UBE2F-209ENST00000433568 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.81■■■□□ 2.2
UBE2F-209ENST00000433568 FAM135BQ49AJ0 1406 aa28.81■■■□□ 2.2
UBE2F-209ENST00000433568 STK26Q9P289 416 aa28.81■■■□□ 2.2
UBE2F-209ENST00000433568 PIK3C2GO75747 1445 aa28.8■■■□□ 2.2
UBE2F-209ENST00000433568 KDM2AQ9Y2K7 1162 aa28.8■■■□□ 2.2
UBE2F-209ENST00000433568 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
UBE2F-209ENST00000433568 ATF3P18847 181 aa28.79■■■□□ 2.2
UBE2F-209ENST00000433568 ASXL1Q8IXJ9 1541 aa28.78■■■□□ 2.2
UBE2F-209ENST00000433568 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
UBE2F-209ENST00000433568 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
UBE2F-209ENST00000433568 DISP3Q9P2K9 1392 aa28.75■■■□□ 2.19
UBE2F-209ENST00000433568 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
UBE2F-209ENST00000433568 MYOM2P54296 1465 aa28.74■■■□□ 2.19
UBE2F-209ENST00000433568 PTCH1Q13635 1447 aa28.74■■■□□ 2.19
UBE2F-209ENST00000433568 NRXN1Q9ULB1 1477 aa28.73■■■□□ 2.19
UBE2F-209ENST00000433568 ADGRL3Q9HAR2 1447 aa28.72■■■□□ 2.19
UBE2F-209ENST00000433568 C14orf93Q9H972 538 aaKnown RBP28.72■■■□□ 2.19
UBE2F-209ENST00000433568 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
UBE2F-209ENST00000433568 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
UBE2F-209ENST00000433568 WAPLQ7Z5K2 1190 aa28.71■■■□□ 2.19
UBE2F-209ENST00000433568 NALCNQ8IZF0 1738 aa28.71■■■□□ 2.19
UBE2F-209ENST00000433568 LRPPRCP42704 1394 aaKnown RBP28.69■■■□□ 2.18
UBE2F-209ENST00000433568 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
UBE2F-209ENST00000433568 MST1RQ04912 1400 aa28.67■■■□□ 2.18
UBE2F-209ENST00000433568 DCCP43146 1447 aa28.66■■■□□ 2.18
UBE2F-209ENST00000433568 PRAG1Q86YV5 1406 aa28.66■■■□□ 2.18
UBE2F-209ENST00000433568 YTHDC2Q9H6S0 1430 aaKnown RBP28.66■■■□□ 2.18
UBE2F-209ENST00000433568 BRINP3Q76B58 766 aa28.65■■■□□ 2.18
UBE2F-209ENST00000433568 SIN3AQ96ST3 1273 aa28.65■■■□□ 2.18
UBE2F-209ENST00000433568 ABCC11Q96J66 1382 aa28.62■■■□□ 2.17
UBE2F-209ENST00000433568 TECPR2O15040 1411 aa28.62■■■□□ 2.17
UBE2F-209ENST00000433568 MED1Q15648 1581 aaPredicted RBP28.62■■■□□ 2.17
UBE2F-209ENST00000433568 DDX17Q92841 729 aaKnown RBP28.61■■■□□ 2.17
UBE2F-209ENST00000433568 PHLPP1O60346 1717 aa28.6■■■□□ 2.17
UBE2F-209ENST00000433568 NEUROD1Q13562 356 aa28.58■■■□□ 2.17
UBE2F-209ENST00000433568 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
UBE2F-209ENST00000433568 NUTM2FA1L443 756 aa28.57■■■□□ 2.16
UBE2F-209ENST00000433568 C1orf167Q5SNV9 1468 aa28.57■■■□□ 2.16
UBE2F-209ENST00000433568 ILDR2Q71H61 639 aa28.56■■■□□ 2.16
UBE2F-209ENST00000433568 KNDC1Q76NI1 1749 aa28.55■■■□□ 2.16
UBE2F-209ENST00000433568 LAMC1P11047 1609 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms