RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 ILDR1Q86SU0 546 aaPredicted RBP28.15■■■□□ 2.1
RPUSD3-207ENST00000433555 EID1Q9Y6B2 187 aa28.15■■■□□ 2.1
RPUSD3-207ENST00000433555 NRXN3Q9Y4C0 1643 aa28.13■■■□□ 2.09
RPUSD3-207ENST00000433555 PPLO60437 1756 aa28.11■■■□□ 2.09
RPUSD3-207ENST00000433555 CERKQ8TCT0 537 aa28.11■■■□□ 2.09
RPUSD3-207ENST00000433555 ACIN1Q9UKV3 1341 aaKnown RBP28.1■■■□□ 2.09
RPUSD3-207ENST00000433555 PLEKHG1Q9ULL1 1385 aa28.1■■■□□ 2.09
RPUSD3-207ENST00000433555 IFT172Q9UG01 1749 aa28.09■■■□□ 2.09
RPUSD3-207ENST00000433555 NUTM2DQ5VT03 806 aaPredicted RBP28.09■■■□□ 2.09
RPUSD3-207ENST00000433555 CPS1P31327 1500 aa28.08■■■□□ 2.09
RPUSD3-207ENST00000433555 CCDC144AA2RUR9 1427 aa28.08■■■□□ 2.09
RPUSD3-207ENST00000433555 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
RPUSD3-207ENST00000433555 HRCP23327 699 aa28.06■■■□□ 2.08
RPUSD3-207ENST00000433555 NWD1Q149M9 1564 aa28.06■■■□□ 2.08
RPUSD3-207ENST00000433555 XIRP1Q702N8 1843 aaKnown RBP28.04■■■□□ 2.08
RPUSD3-207ENST00000433555 DIP2AQ14689 1571 aa28.04■■■□□ 2.08
RPUSD3-207ENST00000433555 SETBP1Q9Y6X0 1596 aa28.04■■■□□ 2.08
RPUSD3-207ENST00000433555 ADAMTS13Q76LX8 1427 aa28.04■■■□□ 2.08
RPUSD3-207ENST00000433555 IQSEC2Q5JU85 1478 aa28.03■■■□□ 2.08
RPUSD3-207ENST00000433555 SPATA31E1Q6ZUB1 1445 aa28.03■■■□□ 2.08
RPUSD3-207ENST00000433555 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
RPUSD3-207ENST00000433555 CHD2O14647 1828 aaKnown RBP28.02■■■□□ 2.08
RPUSD3-207ENST00000433555 SLC26A8Q96RN1 970 aa28.01■■■□□ 2.07
RPUSD3-207ENST00000433555 SETD1AO15047 1707 aaKnown RBP28.01■■■□□ 2.07
RPUSD3-207ENST00000433555 ZNF326Q5BKZ1 582 aaKnown RBP28■■■□□ 2.07
RPUSD3-207ENST00000433555 ABCF1Q8NE71 845 aaKnown RBP eCLIP28■■■□□ 2.07
RPUSD3-207ENST00000433555 LRRC7Q96NW7 1537 aa27.98■■■□□ 2.07
RPUSD3-207ENST00000433555 ANKRD30BQ9BXX2 1392 aa27.98■■■□□ 2.07
RPUSD3-207ENST00000433555 HDGFP51858 240 aaKnown RBP27.94■■■□□ 2.06
RPUSD3-207ENST00000433555 BCANQ96GW7 911 aa27.93■■■□□ 2.06
RPUSD3-207ENST00000433555 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
RPUSD3-207ENST00000433555 FBXO41Q8TF61 875 aa27.92■■■□□ 2.06
RPUSD3-207ENST00000433555 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
RPUSD3-207ENST00000433555 NKTRP30414 1462 aaKnown RBP27.9■■■□□ 2.06
RPUSD3-207ENST00000433555 ALKQ9UM73 1620 aa27.9■■■□□ 2.06
RPUSD3-207ENST00000433555 PTPRUQ92729 1446 aa27.87■■■□□ 2.05
RPUSD3-207ENST00000433555 TBX22Q9Y458 520 aa27.86■■■□□ 2.05
RPUSD3-207ENST00000433555 RPGRIP1LQ68CZ1 1315 aa27.86■■■□□ 2.05
RPUSD3-207ENST00000433555 KCNA6P17658 529 aa27.85■■■□□ 2.05
RPUSD3-207ENST00000433555 RGL3Q3MIN7 710 aa27.85■■■□□ 2.05
RPUSD3-207ENST00000433555 METP08581 1390 aa27.82■■■□□ 2.04
RPUSD3-207ENST00000433555 PIK3R4Q99570 1358 aa27.81■■■□□ 2.04
RPUSD3-207ENST00000433555 MYOM2P54296 1465 aa27.81■■■□□ 2.04
RPUSD3-207ENST00000433555 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
RPUSD3-207ENST00000433555 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
RPUSD3-207ENST00000433555 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
RPUSD3-207ENST00000433555 TMEM94Q12767 1356 aa27.79■■■□□ 2.04
RPUSD3-207ENST00000433555 PIK3C2GO75747 1445 aa27.78■■■□□ 2.04
RPUSD3-207ENST00000433555 VGFO15240 615 aaPredicted RBP27.78■■■□□ 2.04
RPUSD3-207ENST00000433555 DHX57Q6P158 1386 aaKnown RBP27.77■■■□□ 2.04
RPUSD3-207ENST00000433555 RBM33Q96EV2 1170 aaKnown RBP27.76■■■□□ 2.03
RPUSD3-207ENST00000433555 LAMC1P11047 1609 aa27.74■■■□□ 2.03
RPUSD3-207ENST00000433555 UBAP1LF5GYI3 381 aa27.73■■■□□ 2.03
RPUSD3-207ENST00000433555 PROSER2Q86WR7 435 aaPredicted RBP27.71■■■□□ 2.03
RPUSD3-207ENST00000433555 NALCNQ8IZF0 1738 aa27.71■■■□□ 2.03
RPUSD3-207ENST00000433555 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.03
RPUSD3-207ENST00000433555 AMOTL2Q9Y2J4 779 aa27.7■■■□□ 2.02
RPUSD3-207ENST00000433555 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.69■■■□□ 2.02
RPUSD3-207ENST00000433555 PRAG1Q86YV5 1406 aa27.67■■■□□ 2.02
RPUSD3-207ENST00000433555 PTCH1Q13635 1447 aa27.65■■■□□ 2.02
RPUSD3-207ENST00000433555 ROBO2Q9HCK4 1378 aa27.61■■■□□ 2.01
RPUSD3-207ENST00000433555 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
RPUSD3-207ENST00000433555 NCOA3Q9Y6Q9 1424 aa27.6■■■□□ 2.01
RPUSD3-207ENST00000433555 MSH6P52701 1360 aa27.6■■■□□ 2.01
RPUSD3-207ENST00000433555 TOM1O60784 492 aa27.59■■■□□ 2.01
RPUSD3-207ENST00000433555 PIP4K2BP78356 416 aa27.59■■■□□ 2.01
RPUSD3-207ENST00000433555 DCAF11Q8TEB1 546 aa27.58■■■□□ 2.01
RPUSD3-207ENST00000433555 SIN3AQ96ST3 1273 aa27.58■■■□□ 2.01
RPUSD3-207ENST00000433555 ROBO1Q9Y6N7 1651 aa27.58■■■□□ 2.01
RPUSD3-207ENST00000433555 TECPR2O15040 1411 aa27.58■■■□□ 2
RPUSD3-207ENST00000433555 KDM2AQ9Y2K7 1162 aa27.56■■■□□ 2
RPUSD3-207ENST00000433555 SCAF1Q9H7N4 1312 aaKnown RBP27.56■■■□□ 2
RPUSD3-207ENST00000433555 LRPPRCP42704 1394 aaKnown RBP27.56■■■□□ 2
RPUSD3-207ENST00000433555 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
RPUSD3-207ENST00000433555 CFAP70Q5T0N1 1121 aa27.55■■■□□ 2
RPUSD3-207ENST00000433555 TMEM132EQ6IEE7 984 aa27.55■■■□□ 2
RPUSD3-207ENST00000433555 C14orf93Q9H972 538 aaKnown RBP27.55■■■□□ 2
RPUSD3-207ENST00000433555 YTHDC2Q9H6S0 1430 aaKnown RBP27.55■■■□□ 2
RPUSD3-207ENST00000433555 PCGF6Q9BYE7 350 aa27.54■■■□□ 2
RPUSD3-207ENST00000433555 KIAA1210Q9ULL0 1709 aa27.54■■■□□ 2
RPUSD3-207ENST00000433555 DCCP43146 1447 aa27.5■■□□□ 1.99
RPUSD3-207ENST00000433555 C14orf37Q86TY3 774 aa27.5■■□□□ 1.99
RPUSD3-207ENST00000433555 ABCC11Q96J66 1382 aa27.48■■□□□ 1.99
RPUSD3-207ENST00000433555 PLEKHH1Q9ULM0 1364 aa27.48■■□□□ 1.99
RPUSD3-207ENST00000433555 ARHGEF28Q8N1W1 1705 aaKnown RBP27.48■■□□□ 1.99
RPUSD3-207ENST00000433555 STK26Q9P289 416 aa27.48■■□□□ 1.99
RPUSD3-207ENST00000433555 CDC42BPGQ6DT37 1551 aa27.47■■□□□ 1.99
RPUSD3-207ENST00000433555 DLC1Q96QB1 1528 aa27.46■■□□□ 1.99
RPUSD3-207ENST00000433555 NEUROD1Q13562 356 aa27.46■■□□□ 1.99
RPUSD3-207ENST00000433555 MST1RQ04912 1400 aa27.45■■□□□ 1.98
RPUSD3-207ENST00000433555 C19orf44Q9H6X5 657 aa27.45■■□□□ 1.98
RPUSD3-207ENST00000433555 TRPM1Q7Z4N2 1603 aa27.45■■□□□ 1.98
RPUSD3-207ENST00000433555 FAM135BQ49AJ0 1406 aa27.44■■□□□ 1.98
RPUSD3-207ENST00000433555 HSPA1LP34931 641 aa27.44■■□□□ 1.98
RPUSD3-207ENST00000433555 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
RPUSD3-207ENST00000433555 STAC3Q96MF2 364 aa27.43■■□□□ 1.98
RPUSD3-207ENST00000433555 FMN2Q9NZ56 1722 aa27.41■■□□□ 1.98
RPUSD3-207ENST00000433555 WAPLQ7Z5K2 1190 aa27.4■■□□□ 1.98
RPUSD3-207ENST00000433555 PHLPP1O60346 1717 aa27.4■■□□□ 1.98
RPUSD3-207ENST00000433555 CADPS2Q86UW7 1296 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms