RNA–Protein interactions for RNA: ENST00000430978.6

LINC00454-202, long intergenic non-protein coding RNA 454, humanhuman

TSL 5 BASIC

Gene LINC00454, Length 1,327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-202ENST00000430978 SENP3Q9H4L4 574 aaPredicted RBP32.65■■■□□ 2.82
LINC00454-202ENST00000430978 SLC26A8Q96RN1 970 aa32.64■■■□□ 2.82
LINC00454-202ENST00000430978 SLC4A1APQ9BWU0 796 aaKnown RBP32.63■■■□□ 2.81
LINC00454-202ENST00000430978 ZFYVE9O95405 1425 aa32.62■■■□□ 2.81
LINC00454-202ENST00000430978 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.62■■■□□ 2.81
LINC00454-202ENST00000430978 NUTM2DQ5VT03 806 aaPredicted RBP32.58■■■□□ 2.81
LINC00454-202ENST00000430978 TOM1O60784 492 aa32.56■■■□□ 2.8
LINC00454-202ENST00000430978 PLEKHG1Q9ULL1 1385 aa32.56■■■□□ 2.8
LINC00454-202ENST00000430978 LRRC7Q96NW7 1537 aa32.56■■■□□ 2.8
LINC00454-202ENST00000430978 ZNF326Q5BKZ1 582 aaKnown RBP32.54■■■□□ 2.8
LINC00454-202ENST00000430978 SCAF1Q9H7N4 1312 aaKnown RBP32.53■■■□□ 2.8
LINC00454-202ENST00000430978 TRPM2O94759 1503 aa32.53■■■□□ 2.8
LINC00454-202ENST00000430978 KIF1BO60333 1816 aa32.52■■■□□ 2.8
LINC00454-202ENST00000430978 CLTCL1P53675 1640 aa32.52■■■□□ 2.8
LINC00454-202ENST00000430978 KCNA6P17658 529 aa32.51■■■□□ 2.8
LINC00454-202ENST00000430978 PIP4K2BP78356 416 aa32.5■■■□□ 2.79
LINC00454-202ENST00000430978 SETD5Q9C0A6 1442 aa32.48■■■□□ 2.79
LINC00454-202ENST00000430978 FOXD1Q16676 465 aa32.45■■■□□ 2.78
LINC00454-202ENST00000430978 ACIN1Q9UKV3 1341 aaKnown RBP32.45■■■□□ 2.78
LINC00454-202ENST00000430978 PROSER2Q86WR7 435 aaPredicted RBP32.44■■■□□ 2.78
LINC00454-202ENST00000430978 MPHOSPH9Q99550 1183 aa32.44■■■□□ 2.78
LINC00454-202ENST00000430978 TBX22Q9Y458 520 aa32.44■■■□□ 2.78
LINC00454-202ENST00000430978 XIRP1Q702N8 1843 aaKnown RBP32.44■■■□□ 2.78
LINC00454-202ENST00000430978 CHD2O14647 1828 aaKnown RBP32.42■■■□□ 2.78
LINC00454-202ENST00000430978 NWD1Q149M9 1564 aa32.37■■■□□ 2.77
LINC00454-202ENST00000430978 ADAMTS13Q76LX8 1427 aa32.37■■■□□ 2.77
LINC00454-202ENST00000430978 TMEM94Q12767 1356 aa32.37■■■□□ 2.77
LINC00454-202ENST00000430978 DIP2AQ14689 1571 aa32.37■■■□□ 2.77
LINC00454-202ENST00000430978 RBM33Q96EV2 1170 aaKnown RBP32.36■■■□□ 2.77
LINC00454-202ENST00000430978 NKTRP30414 1462 aaKnown RBP32.36■■■□□ 2.77
LINC00454-202ENST00000430978 RAB3GAP2Q9H2M9 1393 aa32.35■■■□□ 2.77
LINC00454-202ENST00000430978 NEXMIFQ5QGS0 1516 aa32.33■■■□□ 2.77
LINC00454-202ENST00000430978 ALKQ9UM73 1620 aa32.32■■■□□ 2.76
LINC00454-202ENST00000430978 PIK3R4Q99570 1358 aa32.3■■■□□ 2.76
LINC00454-202ENST00000430978 CCDC144AA2RUR9 1427 aa32.3■■■□□ 2.76
LINC00454-202ENST00000430978 VGFO15240 615 aaPredicted RBP32.27■■■□□ 2.76
LINC00454-202ENST00000430978 HSPA1LP34931 641 aa32.27■■■□□ 2.76
LINC00454-202ENST00000430978 SETBP1Q9Y6X0 1596 aa32.27■■■□□ 2.76
LINC00454-202ENST00000430978 NRXN3Q9Y4C0 1643 aa32.27■■■□□ 2.76
LINC00454-202ENST00000430978 RPGRIP1LQ68CZ1 1315 aa32.26■■■□□ 2.75
LINC00454-202ENST00000430978 AMOTL2Q9Y2J4 779 aa32.25■■■□□ 2.75
LINC00454-202ENST00000430978 MSH6P52701 1360 aa32.23■■■□□ 2.75
LINC00454-202ENST00000430978 C14orf37Q86TY3 774 aa32.23■■■□□ 2.75
LINC00454-202ENST00000430978 RGL3Q3MIN7 710 aa32.22■■■□□ 2.75
LINC00454-202ENST00000430978 PPLO60437 1756 aa32.21■■■□□ 2.75
LINC00454-202ENST00000430978 PTPRUQ92729 1446 aa32.18■■■□□ 2.74
LINC00454-202ENST00000430978 METP08581 1390 aa32.17■■■□□ 2.74
LINC00454-202ENST00000430978 NCOA3Q9Y6Q9 1424 aa32.15■■■□□ 2.74
LINC00454-202ENST00000430978 HRCP23327 699 aa32.14■■■□□ 2.74
LINC00454-202ENST00000430978 DISP3Q9P2K9 1392 aa32.12■■■□□ 2.73
LINC00454-202ENST00000430978 SPATA31E1Q6ZUB1 1445 aa32.11■■■□□ 2.73
LINC00454-202ENST00000430978 XRN1Q8IZH2 1706 aaKnown RBP32.11■■■□□ 2.73
LINC00454-202ENST00000430978 FAM135BQ49AJ0 1406 aa32.1■■■□□ 2.73
LINC00454-202ENST00000430978 C19orf44Q9H6X5 657 aa32.09■■■□□ 2.73
LINC00454-202ENST00000430978 SLAIN2Q9P270 581 aa32.09■■■□□ 2.73
LINC00454-202ENST00000430978 ATF3P18847 181 aa32.07■■■□□ 2.72
LINC00454-202ENST00000430978 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.07■■■□□ 2.72
LINC00454-202ENST00000430978 ANKRD30BQ9BXX2 1392 aa32.07■■■□□ 2.72
LINC00454-202ENST00000430978 ROBO1Q9Y6N7 1651 aa32.07■■■□□ 2.72
LINC00454-202ENST00000430978 IFT172Q9UG01 1749 aa32.06■■■□□ 2.72
LINC00454-202ENST00000430978 SETD1AO15047 1707 aaKnown RBP32.05■■■□□ 2.72
LINC00454-202ENST00000430978 ADGRF5Q8IZF2 1346 aa32.05■■■□□ 2.72
LINC00454-202ENST00000430978 CADPS2Q86UW7 1296 aa32.04■■■□□ 2.72
LINC00454-202ENST00000430978 DCCP43146 1447 aa31.92■■■□□ 2.7
LINC00454-202ENST00000430978 PTCH1Q13635 1447 aa31.91■■■□□ 2.7
LINC00454-202ENST00000430978 PHLPP1O60346 1717 aa31.9■■■□□ 2.7
LINC00454-202ENST00000430978 PIK3C2GO75747 1445 aa31.9■■■□□ 2.7
LINC00454-202ENST00000430978 MED1Q15648 1581 aaPredicted RBP31.9■■■□□ 2.7
LINC00454-202ENST00000430978 ADGRL3Q9HAR2 1447 aa31.9■■■□□ 2.7
LINC00454-202ENST00000430978 ROBO2Q9HCK4 1378 aa31.9■■■□□ 2.7
LINC00454-202ENST00000430978 NALCNQ8IZF0 1738 aa31.89■■■□□ 2.7
LINC00454-202ENST00000430978 STK26Q9P289 416 aa31.89■■■□□ 2.7
LINC00454-202ENST00000430978 TMEM132EQ6IEE7 984 aa31.87■■■□□ 2.69
LINC00454-202ENST00000430978 MYOM2P54296 1465 aa31.85■■■□□ 2.69
LINC00454-202ENST00000430978 KDM2AQ9Y2K7 1162 aa31.83■■■□□ 2.69
LINC00454-202ENST00000430978 PRAG1Q86YV5 1406 aa31.83■■■□□ 2.69
LINC00454-202ENST00000430978 C14orf93Q9H972 538 aaKnown RBP31.82■■■□□ 2.68
LINC00454-202ENST00000430978 BRINP3Q76B58 766 aa31.81■■■□□ 2.68
LINC00454-202ENST00000430978 DCAF11Q8TEB1 546 aa31.81■■■□□ 2.68
LINC00454-202ENST00000430978 LRPPRCP42704 1394 aaKnown RBP31.81■■■□□ 2.68
LINC00454-202ENST00000430978 MST1RQ04912 1400 aa31.8■■■□□ 2.68
LINC00454-202ENST00000430978 CFAP70Q5T0N1 1121 aa31.8■■■□□ 2.68
LINC00454-202ENST00000430978 PHF23Q9BUL5 403 aaPredicted RBP31.8■■■□□ 2.68
LINC00454-202ENST00000430978 NRXN1Q9ULB1 1477 aa31.8■■■□□ 2.68
LINC00454-202ENST00000430978 LAMC1P11047 1609 aa31.79■■■□□ 2.68
LINC00454-202ENST00000430978 ASXL1Q8IXJ9 1541 aa31.78■■■□□ 2.68
LINC00454-202ENST00000430978 ILDR2Q71H61 639 aa31.77■■■□□ 2.68
LINC00454-202ENST00000430978 ABCC11Q96J66 1382 aa31.77■■■□□ 2.68
LINC00454-202ENST00000430978 YTHDC2Q9H6S0 1430 aaKnown RBP31.76■■■□□ 2.68
LINC00454-202ENST00000430978 KNDC1Q76NI1 1749 aa31.76■■■□□ 2.67
LINC00454-202ENST00000430978 DHX57Q6P158 1386 aaKnown RBP31.76■■■□□ 2.67
LINC00454-202ENST00000430978 WAPLQ7Z5K2 1190 aa31.75■■■□□ 2.67
LINC00454-202ENST00000430978 TECPR2O15040 1411 aa31.74■■■□□ 2.67
LINC00454-202ENST00000430978 COL16A1Q07092 1604 aaPredicted RBP31.74■■■□□ 2.67
LINC00454-202ENST00000430978 AHDC1Q5TGY3 1603 aaPredicted RBP31.74■■■□□ 2.67
LINC00454-202ENST00000430978 STAC3Q96MF2 364 aa31.74■■■□□ 2.67
LINC00454-202ENST00000430978 JCADQ9P266 1359 aa31.72■■■□□ 2.67
LINC00454-202ENST00000430978 C1orf167Q5SNV9 1468 aa31.7■■■□□ 2.67
LINC00454-202ENST00000430978 PLEKHH1Q9ULM0 1364 aa31.67■■■□□ 2.66
LINC00454-202ENST00000430978 SIRT1Q96EB6 747 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms