RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 SUPT6HQ7KZ85 1726 aaKnown RBP8.63□□□□□ -1.03
CPS1-203ENST00000430249 CLSTN1O94985 981 aa8.63□□□□□ -1.03
CPS1-203ENST00000430249 DAPK1P53355 1430 aa8.63□□□□□ -1.03
CPS1-203ENST00000430249 CUL7Q14999 1698 aa8.63□□□□□ -1.03
CPS1-203ENST00000430249 NOC3LQ8WTT2 800 aaKnown RBP8.63□□□□□ -1.03
CPS1-203ENST00000430249 AKAP17AQ02040 695 aaKnown RBP8.63□□□□□ -1.03
CPS1-203ENST00000430249 TEFQ10587 303 aa8.63□□□□□ -1.03
CPS1-203ENST00000430249 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
CPS1-203ENST00000430249 ZKSCAN1P17029 563 aaPredicted RBP8.62□□□□□ -1.03
CPS1-203ENST00000430249 H3BQV1 296 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 SLC4A10Q6U841 1118 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 AEBP2Q6ZN18 517 aaPredicted RBP8.62□□□□□ -1.03
CPS1-203ENST00000430249 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 TSR1Q2NL82 804 aaKnown RBP8.62□□□□□ -1.03
CPS1-203ENST00000430249 CCDC70Q6NSX1 233 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 DIAPH3Q9NSV4 1193 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 FANCIQ9NVI1 1328 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 ERC2O15083 957 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 CCDC146Q8IYE0 955 aa8.62□□□□□ -1.03
CPS1-203ENST00000430249 AQRO60306 1485 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPS1-203ENST00000430249 RUSC2Q8N2Y8 1516 aa8.61□□□□□ -1.03
CPS1-203ENST00000430249 APBB1O00213 710 aa8.61□□□□□ -1.03
CPS1-203ENST00000430249 RAD54L2Q9Y4B4 1467 aa8.61□□□□□ -1.03
CPS1-203ENST00000430249 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
CPS1-203ENST00000430249 FAM184AQ8NB25 1140 aa8.61□□□□□ -1.03
CPS1-203ENST00000430249 RASSF8Q8NHQ8 419 aa8.61□□□□□ -1.03
CPS1-203ENST00000430249 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
CPS1-203ENST00000430249 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPS1-203ENST00000430249 DZIP1LQ8IYY4 767 aaKnown RBP8.61□□□□□ -1.03
CPS1-203ENST00000430249 SMG6Q86US8 1419 aaKnown RBP8.61□□□□□ -1.03
CPS1-203ENST00000430249 TRIM29Q14134 588 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 CEP89Q96ST8 783 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 TULP1O00294 542 aaPredicted RBP8.6□□□□□ -1.03
CPS1-203ENST00000430249 DHX8Q14562 1220 aaKnown RBP8.6□□□□□ -1.03
CPS1-203ENST00000430249 ANKRD20A12PQ8NF67 263 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 MAP3K1Q13233 1512 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 KIAA1107Q9UPP5 1409 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 NUCB2P80303 420 aa8.6□□□□□ -1.03
CPS1-203ENST00000430249 GPS2Q13227 327 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 TROQ12816 1431 aaPredicted RBP8.59□□□□□ -1.03
CPS1-203ENST00000430249 CCDC9Q9Y3X0 531 aaKnown RBP8.59□□□□□ -1.03
CPS1-203ENST00000430249 HIP1O00291 1037 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 CCDC141Q6ZP82 1450 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 PRXQ9BXM0 1461 aa8.59□□□□□ -1.03
CPS1-203ENST00000430249 PDE4AP27815 886 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 GTF2E1P29083 439 aaPredicted RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 MARCH6O60337 910 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 LETM1O95202 739 aaPredicted RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 EVA1CP58658 441 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 ANKRD45Q5TZF3 282 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 SLKQ9H2G2 1235 aaPredicted RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 TSHZ2Q9NRE2 1034 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 SENP3-EIF4A1A0A087X0R7 540 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 TPD52L1Q16890 204 aaPredicted RBP8.58□□□□□ -1.04
CPS1-203ENST00000430249 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 CHMP5Q9NZZ3 219 aa8.58□□□□□ -1.04
CPS1-203ENST00000430249 FRAT2O75474 233 aaPredicted RBP8.57□□□□□ -1.04
CPS1-203ENST00000430249 C9orf78Q9NZ63 289 aaPredicted RBP8.57□□□□□ -1.04
CPS1-203ENST00000430249 KIF7Q2M1P5 1343 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 C9orf84Q5VXU9 1444 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 G3BP1Q13283 466 aaKnown RBP eCLIP8.57□□□□□ -1.043e-6■■■■□ 19.4
CPS1-203ENST00000430249 PNISRQ8TF01 805 aaKnown RBP8.57□□□□□ -1.04
CPS1-203ENST00000430249 TAOK2Q9UL54 1235 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 LAMC3Q9Y6N6 1575 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 POGZQ7Z3K3 1410 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 TOPBP1Q92547 1522 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 MCM2P49736 904 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 PSME1Q06323 249 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 GPRASP1Q5JY77 1395 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 SYNJ1O43426 1573 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 CC2D2AQ9P2K1 1620 aa8.57□□□□□ -1.04
CPS1-203ENST00000430249 PSMA5P28066 241 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 RIPK4P57078 832 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 TRDNQ13061 729 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 ERC1Q8IUD2 1116 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 ARAP1Q96P48 1450 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 PRG4Q92954 1404 aaPredicted RBP8.56□□□□□ -1.04
CPS1-203ENST00000430249 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
CPS1-203ENST00000430249 ERICH2A1L162 156 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 CRBNQ96SW2 442 aa8.56□□□□□ -1.04
CPS1-203ENST00000430249 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
CPS1-203ENST00000430249 ANKRD30BQ9BXX2 1392 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 CDC45O75419 566 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 GNAI3P08754 354 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 RILPL2Q969X0 211 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 ZNF692Q9BU19 519 aaPredicted RBP8.55□□□□□ -1.04
CPS1-203ENST00000430249 MINK1Q8N4C8 1332 aaPredicted RBP8.55□□□□□ -1.04
CPS1-203ENST00000430249 BECN2A8MW95 431 aa8.55□□□□□ -1.04
CPS1-203ENST00000430249 TOMM22Q9NS69 142 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 ZNF428Q96B54 188 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms