RNA–Protein interactions for RNA: ENST00000430198.2

HMGA1P2-201, Transcript of high mobility group AT-hook 1 pseudogene 2, humanhuman

BASIC

Gene HMGA1P2, Length 324 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P2-201ENST00000430198 UPF1Q92900 1129 aaKnown RBP eCLIP19.31■□□□□ 0.68
HMGA1P2-201ENST00000430198 TRIM52Q96A61 297 aa19.31■□□□□ 0.68
HMGA1P2-201ENST00000430198 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
HMGA1P2-201ENST00000430198 SLC52A1Q9NWF4 448 aa19.29■□□□□ 0.68
HMGA1P2-201ENST00000430198 KDM5AP29375 1690 aaKnown RBP19.29■□□□□ 0.68
HMGA1P2-201ENST00000430198 MYO5BQ9ULV0 1848 aa19.28■□□□□ 0.68
HMGA1P2-201ENST00000430198 ZFYVE9O95405 1425 aa19.28■□□□□ 0.68
HMGA1P2-201ENST00000430198 NKTRP30414 1462 aaKnown RBP19.28■□□□□ 0.68
HMGA1P2-201ENST00000430198 CHD2O14647 1828 aaKnown RBP19.28■□□□□ 0.68
HMGA1P2-201ENST00000430198 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
HMGA1P2-201ENST00000430198 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.68
HMGA1P2-201ENST00000430198 ANKRD30AQ9BXX3 1397 aa19.27■□□□□ 0.68
HMGA1P2-201ENST00000430198 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
HMGA1P2-201ENST00000430198 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
HMGA1P2-201ENST00000430198 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
HMGA1P2-201ENST00000430198 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
HMGA1P2-201ENST00000430198 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
HMGA1P2-201ENST00000430198 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
HMGA1P2-201ENST00000430198 C14orf37Q86TY3 774 aa19.23■□□□□ 0.67
HMGA1P2-201ENST00000430198 NUTM2BA6NNL0 878 aaPredicted RBP19.22■□□□□ 0.67
HMGA1P2-201ENST00000430198 NUTM2EB1AL46 878 aaPredicted RBP19.22■□□□□ 0.67
HMGA1P2-201ENST00000430198 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
HMGA1P2-201ENST00000430198 ADAMTS13Q76LX8 1427 aa19.22■□□□□ 0.67
HMGA1P2-201ENST00000430198 MEX3CQ5U5Q3 659 aaKnown RBP19.21■□□□□ 0.67
HMGA1P2-201ENST00000430198 C19orf44Q9H6X5 657 aa19.2■□□□□ 0.66
HMGA1P2-201ENST00000430198 TMEM131LA2VDJ0 1609 aa19.2■□□□□ 0.66
HMGA1P2-201ENST00000430198 SPATA31A6Q5VVP1 1343 aa19.19■□□□□ 0.66
HMGA1P2-201ENST00000430198 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 ZNF772Q68DY9 489 aaPredicted RBP19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 BRINP3Q76B58 766 aa19.18■□□□□ 0.66
HMGA1P2-201ENST00000430198 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
HMGA1P2-201ENST00000430198 AMOTL2Q9Y2J4 779 aa19.17■□□□□ 0.66
HMGA1P2-201ENST00000430198 ATF3P18847 181 aa19.16■□□□□ 0.66
HMGA1P2-201ENST00000430198 RXRBP28702 533 aa19.16■□□□□ 0.66
HMGA1P2-201ENST00000430198 APLP2Q06481 763 aa19.16■□□□□ 0.66
HMGA1P2-201ENST00000430198 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
HMGA1P2-201ENST00000430198 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
HMGA1P2-201ENST00000430198 CADPS2Q86UW7 1296 aa19.15■□□□□ 0.66
HMGA1P2-201ENST00000430198 ADGRL2O95490 1459 aa19.14■□□□□ 0.65
HMGA1P2-201ENST00000430198 NCOA3Q9Y6Q9 1424 aa19.13■□□□□ 0.65
HMGA1P2-201ENST00000430198 AHDC1Q5TGY3 1603 aaPredicted RBP19.12■□□□□ 0.65
HMGA1P2-201ENST00000430198 RPRD2Q5VT52 1461 aaKnown RBP19.12■□□□□ 0.65
HMGA1P2-201ENST00000430198 AFF2P51816 1311 aa19.12■□□□□ 0.65
HMGA1P2-201ENST00000430198 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.12■□□□□ 0.65
HMGA1P2-201ENST00000430198 DIP2AQ14689 1571 aa19.11■□□□□ 0.65
HMGA1P2-201ENST00000430198 SHPRHQ149N8 1683 aa19.1■□□□□ 0.65
HMGA1P2-201ENST00000430198 E9PCH4 1651 aa19.08■□□□□ 0.64
HMGA1P2-201ENST00000430198 QTRT2Q9H974 415 aaKnown RBP19.07■□□□□ 0.64
HMGA1P2-201ENST00000430198 C8orf37Q96NL8 207 aa19.06■□□□□ 0.64
HMGA1P2-201ENST00000430198 METP08581 1390 aa19.05■□□□□ 0.64
HMGA1P2-201ENST00000430198 PIK3R4Q99570 1358 aa19.05■□□□□ 0.64
HMGA1P2-201ENST00000430198 MST1RQ04912 1400 aa19.04■□□□□ 0.64
HMGA1P2-201ENST00000430198 SETD5Q9C0A6 1442 aa19.02■□□□□ 0.64
HMGA1P2-201ENST00000430198 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
HMGA1P2-201ENST00000430198 UNC13BO14795 1591 aa19.02■□□□□ 0.63
HMGA1P2-201ENST00000430198 RGS12O14924 1447 aa19.01■□□□□ 0.63
HMGA1P2-201ENST00000430198 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
HMGA1P2-201ENST00000430198 LRRC59Q96AG4 307 aaKnown RBP19.01■□□□□ 0.63
HMGA1P2-201ENST00000430198 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
HMGA1P2-201ENST00000430198 NUP155O75694 1391 aa19■□□□□ 0.63
HMGA1P2-201ENST00000430198 CDK12Q9NYV4 1490 aaPredicted RBP18.99■□□□□ 0.63
HMGA1P2-201ENST00000430198 PNPLA6Q8IY17 1366 aa18.99■□□□□ 0.63
HMGA1P2-201ENST00000430198 RBM6P78332 1123 aaKnown RBP18.99■□□□□ 0.63
HMGA1P2-201ENST00000430198 TRPM2O94759 1503 aa18.99■□□□□ 0.63
HMGA1P2-201ENST00000430198 ITGAEP38570 1179 aa18.98■□□□□ 0.63
HMGA1P2-201ENST00000430198 NGLY1Q96IV0 654 aa18.97■□□□□ 0.63
HMGA1P2-201ENST00000430198 ORAI2Q96SN7 254 aa18.97■□□□□ 0.63
HMGA1P2-201ENST00000430198 XRN1Q8IZH2 1706 aaKnown RBP18.97■□□□□ 0.63
HMGA1P2-201ENST00000430198 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
HMGA1P2-201ENST00000430198 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
HMGA1P2-201ENST00000430198 SRCAPQ6ZRS2 3230 aa18.94■□□□□ 0.62
HMGA1P2-201ENST00000430198 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
HMGA1P2-201ENST00000430198 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
HMGA1P2-201ENST00000430198 DCCP43146 1447 aa18.93■□□□□ 0.62
HMGA1P2-201ENST00000430198 SETBP1Q9Y6X0 1596 aa18.91■□□□□ 0.62
HMGA1P2-201ENST00000430198 USP21Q9UK80 565 aa18.9■□□□□ 0.62
HMGA1P2-201ENST00000430198 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
HMGA1P2-201ENST00000430198 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
HMGA1P2-201ENST00000430198 ROCK1Q13464 1354 aa18.89■□□□□ 0.61
HMGA1P2-201ENST00000430198 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
HMGA1P2-201ENST00000430198 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
HMGA1P2-201ENST00000430198 ROBO2Q9HCK4 1378 aa18.86■□□□□ 0.61
HMGA1P2-201ENST00000430198 FNBP4Q8N3X1 1017 aaPredicted RBP18.86■□□□□ 0.61
HMGA1P2-201ENST00000430198 XPCQ01831 940 aaPredicted RBP18.83■□□□□ 0.6
HMGA1P2-201ENST00000430198 TRPC5Q9UL62 973 aaPredicted RBP18.83■□□□□ 0.6
HMGA1P2-201ENST00000430198 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
HMGA1P2-201ENST00000430198 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
HMGA1P2-201ENST00000430198 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
HMGA1P2-201ENST00000430198 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
HMGA1P2-201ENST00000430198 ATRNO75882 1429 aa18.8■□□□□ 0.6
HMGA1P2-201ENST00000430198 BCL9LQ86UU0 1499 aa18.79■□□□□ 0.6
HMGA1P2-201ENST00000430198 ZRANB1Q9UGI0 708 aa18.78■□□□□ 0.6
HMGA1P2-201ENST00000430198 LAMC1P11047 1609 aa18.78■□□□□ 0.6
HMGA1P2-201ENST00000430198 NUTM2FA1L443 756 aa18.77■□□□□ 0.6
HMGA1P2-201ENST00000430198 FOXO3O43524 673 aa18.77■□□□□ 0.6
HMGA1P2-201ENST00000430198 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
HMGA1P2-201ENST00000430198 PTCH1Q13635 1447 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms