RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DDX49Q9Y6V7 483 aaKnown RBP15.66■□□□□ 0.1
LDB3-205ENST00000429277 ANKRD20A12PQ8NF67 263 aa15.66■□□□□ 0.1
LDB3-205ENST00000429277 MYOM3Q5VTT5 1437 aa15.65■□□□□ 0.1
LDB3-205ENST00000429277 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
LDB3-205ENST00000429277 GPS2Q13227 327 aa15.65■□□□□ 0.1
LDB3-205ENST00000429277 RRP7AQ9Y3A4 280 aaKnown RBP15.65■□□□□ 0.1
LDB3-205ENST00000429277 PRM3Q9NNZ6 103 aa15.64■□□□□ 0.09
LDB3-205ENST00000429277 IPO7O95373 1038 aaKnown RBP15.64■□□□□ 0.09
LDB3-205ENST00000429277 TRIM34Q9BYJ4 488 aa15.64■□□□□ 0.09
LDB3-205ENST00000429277 IFIT2P09913 472 aaKnown RBP15.63■□□□□ 0.09
LDB3-205ENST00000429277 TSHZ2Q9NRE2 1034 aa15.63■□□□□ 0.09
LDB3-205ENST00000429277 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
LDB3-205ENST00000429277 PDE4AP27815 886 aa15.63■□□□□ 0.09
LDB3-205ENST00000429277 TRDNQ13061 729 aa15.63■□□□□ 0.09
LDB3-205ENST00000429277 NUTM2FA1L443 756 aa15.63■□□□□ 0.09
LDB3-205ENST00000429277 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
LDB3-205ENST00000429277 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
LDB3-205ENST00000429277 TCEAL9Q9UHQ7 104 aa15.62■□□□□ 0.09
LDB3-205ENST00000429277 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
LDB3-205ENST00000429277 GNAI1P63096 354 aa15.61■□□□□ 0.09
LDB3-205ENST00000429277 CPLX1O14810 134 aa15.61■□□□□ 0.09
LDB3-205ENST00000429277 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
LDB3-205ENST00000429277 CTDP1Q9Y5B0 961 aaPredicted RBP15.61■□□□□ 0.09
LDB3-205ENST00000429277 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
LDB3-205ENST00000429277 G3BP1Q13283 466 aaKnown RBP eCLIP15.6■□□□□ 0.09
LDB3-205ENST00000429277 RUNDC1Q96C34 613 aa15.6■□□□□ 0.09
LDB3-205ENST00000429277 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
LDB3-205ENST00000429277 ERC2O15083 957 aa15.6■□□□□ 0.09
LDB3-205ENST00000429277 MINK1Q8N4C8 1332 aaPredicted RBP15.6■□□□□ 0.09
LDB3-205ENST00000429277 CUX1P39880 1505 aa15.59■□□□□ 0.09
LDB3-205ENST00000429277 WIZO95785 1651 aa15.59■□□□□ 0.09
LDB3-205ENST00000429277 ANO8Q9HCE9 1232 aaPredicted RBP15.58■□□□□ 0.08
LDB3-205ENST00000429277 APAF1O14727 1248 aa15.58■□□□□ 0.08
LDB3-205ENST00000429277 MCTP1Q6DN14 999 aa15.58■□□□□ 0.08
LDB3-205ENST00000429277 INTS3Q68E01 1043 aaKnown RBP15.58■□□□□ 0.08
LDB3-205ENST00000429277 COG6Q9Y2V7 657 aa15.58■□□□□ 0.08
LDB3-205ENST00000429277 ERICH2A1L162 156 aa15.58■□□□□ 0.08
LDB3-205ENST00000429277 RIPK4P57078 832 aa15.58■□□□□ 0.08
LDB3-205ENST00000429277 PSME1Q06323 249 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 NUCB2P80303 420 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 SETQ01105 290 aaPredicted RBP15.57■□□□□ 0.08
LDB3-205ENST00000429277 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 BCL2L13Q9BXK5 485 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 ANO2Q9NQ90 1003 aa15.57■□□□□ 0.08
LDB3-205ENST00000429277 CHMP5Q9NZZ3 219 aa15.56■□□□□ 0.08
LDB3-205ENST00000429277 EIF2S2P20042 333 aaKnown RBP15.56■□□□□ 0.08
LDB3-205ENST00000429277 FKBP5Q13451 457 aaPredicted RBP15.55■□□□□ 0.08
LDB3-205ENST00000429277 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
LDB3-205ENST00000429277 OSCARQ8IYS5 282 aa15.55■□□□□ 0.08
LDB3-205ENST00000429277 FOXD4L4Q8WXT5 416 aaPredicted RBP15.55■□□□□ 0.08
LDB3-205ENST00000429277 WASHC2AQ641Q2 1341 aa15.55■□□□□ 0.08
LDB3-205ENST00000429277 SAFBQ15424 915 aaKnown RBP eCLIP15.55■□□□□ 0.08
LDB3-205ENST00000429277 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
LDB3-205ENST00000429277 RAPGEF4Q8WZA2 1011 aa15.54■□□□□ 0.08
LDB3-205ENST00000429277 RSPH6AQ9H0K4 717 aa15.54■□□□□ 0.08
LDB3-205ENST00000429277 APPP05067 770 aa15.54■□□□□ 0.08
LDB3-205ENST00000429277 GSE1Q14687 1217 aa15.54■□□□□ 0.08
LDB3-205ENST00000429277 PDE4CQ08493 712 aa15.52■□□□□ 0.07
LDB3-205ENST00000429277 BICD2Q8TD16 824 aa15.52■□□□□ 0.07
LDB3-205ENST00000429277 SMARCA4P51532 1647 aa15.52■□□□□ 0.07
LDB3-205ENST00000429277 TSPYL4Q9UJ04 414 aa15.51■□□□□ 0.07
LDB3-205ENST00000429277 SMC3Q9UQE7 1217 aa15.51■□□□□ 0.07
LDB3-205ENST00000429277 PCMTD1Q96MG8 357 aaPredicted RBP15.51■□□□□ 0.07
LDB3-205ENST00000429277 MSH5O43196 834 aa15.5■□□□□ 0.07
LDB3-205ENST00000429277 NFXL1Q6ZNB6 911 aa15.5■□□□□ 0.07
LDB3-205ENST00000429277 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
LDB3-205ENST00000429277 DHX16O60231 1041 aaKnown RBP15.5■□□□□ 0.07
LDB3-205ENST00000429277 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
LDB3-205ENST00000429277 NINLQ9Y2I6 1382 aa15.5■□□□□ 0.07
LDB3-205ENST00000429277 RALYLQ86SE5 291 aaKnown RBP15.5■□□□□ 0.07
LDB3-205ENST00000429277 CCAR2Q8N163 923 aaKnown RBP15.5■□□□□ 0.07
LDB3-205ENST00000429277 PLIN1O60240 522 aa15.49■□□□□ 0.07
LDB3-205ENST00000429277 CCDC43Q96MW1 224 aaKnown RBP15.49■□□□□ 0.07
LDB3-205ENST00000429277 CDR1P51861 262 aa15.49■□□□□ 0.07
LDB3-205ENST00000429277 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
LDB3-205ENST00000429277 XBP1P17861 261 aa15.49■□□□□ 0.07
LDB3-205ENST00000429277 ATF3P18847 181 aa15.49■□□□□ 0.07
LDB3-205ENST00000429277 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
LDB3-205ENST00000429277 SASS6Q6UVJ0 657 aa15.48■□□□□ 0.07
LDB3-205ENST00000429277 ARID3AQ99856 593 aa15.48■□□□□ 0.07
LDB3-205ENST00000429277 FGD6Q6ZV73 1430 aa15.48■□□□□ 0.07
LDB3-205ENST00000429277 PSMA5P28066 241 aa15.48■□□□□ 0.07
LDB3-205ENST00000429277 RBM33Q96EV2 1170 aaKnown RBP15.48■□□□□ 0.07
LDB3-205ENST00000429277 RRBP1Q9P2E9 1410 aaKnown RBP15.47■□□□□ 0.07
LDB3-205ENST00000429277 HSP90AA2PQ14568 343 aaPredicted RBP15.47■□□□□ 0.07
LDB3-205ENST00000429277 FYCO1Q9BQS8 1478 aa15.47■□□□□ 0.07
LDB3-205ENST00000429277 GNAI3P08754 354 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 BRD4O60885 1362 aaPredicted RBP15.46■□□□□ 0.07
LDB3-205ENST00000429277 CDC45O75419 566 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 ACBD3Q9H3P7 528 aa15.46■□□□□ 0.07
LDB3-205ENST00000429277 TEX35Q5T0J7 233 aa15.46■□□□□ 0.06
LDB3-205ENST00000429277 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.06
LDB3-205ENST00000429277 NAT10Q9H0A0 1025 aaKnown RBP15.46■□□□□ 0.06
LDB3-205ENST00000429277 UBTFL1P0CB47 393 aaPredicted RBP15.45■□□□□ 0.06
LDB3-205ENST00000429277 HIP1O00291 1037 aa15.45■□□□□ 0.06
LDB3-205ENST00000429277 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms