RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-205ENST00000427561 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
UBA1-205ENST00000427561 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
UBA1-205ENST00000427561 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
UBA1-205ENST00000427561 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
UBA1-205ENST00000427561 UNC13BO14795 1591 aa21.09■□□□□ 0.97
UBA1-205ENST00000427561 CHD2O14647 1828 aaKnown RBP21.08■□□□□ 0.97
UBA1-205ENST00000427561 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.97
UBA1-205ENST00000427561 ZFYVE9O95405 1425 aa21.07■□□□□ 0.96
UBA1-205ENST00000427561 RBM33Q96EV2 1170 aaKnown RBP21.07■□□□□ 0.96
UBA1-205ENST00000427561 ROBO1Q9Y6N7 1651 aa21.07■□□□□ 0.96
UBA1-205ENST00000427561 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
UBA1-205ENST00000427561 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
UBA1-205ENST00000427561 E9PCH4 1651 aa21.05■□□□□ 0.96
UBA1-205ENST00000427561 RIMS2Q9UQ26 1411 aa21.05■□□□□ 0.96
UBA1-205ENST00000427561 MSH6P52701 1360 aa21.04■□□□□ 0.96
UBA1-205ENST00000427561 ROCK1Q13464 1354 aa21.04■□□□□ 0.96
UBA1-205ENST00000427561 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
UBA1-205ENST00000427561 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
UBA1-205ENST00000427561 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
UBA1-205ENST00000427561 IQGAP3Q86VI3 1631 aa21.02■□□□□ 0.96
UBA1-205ENST00000427561 RGS17Q9UGC6 210 aaPredicted RBP21■□□□□ 0.95
UBA1-205ENST00000427561 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
UBA1-205ENST00000427561 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
UBA1-205ENST00000427561 NUP155O75694 1391 aa20.97■□□□□ 0.95
UBA1-205ENST00000427561 ITGAEP38570 1179 aa20.96■□□□□ 0.95
UBA1-205ENST00000427561 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
UBA1-205ENST00000427561 NUTM2DQ5VT03 806 aaPredicted RBP20.95■□□□□ 0.94
UBA1-205ENST00000427561 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
UBA1-205ENST00000427561 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
UBA1-205ENST00000427561 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
UBA1-205ENST00000427561 ADAMTS13Q76LX8 1427 aa20.93■□□□□ 0.94
UBA1-205ENST00000427561 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.9■□□□□ 0.94
UBA1-205ENST00000427561 JCADQ9P266 1359 aa20.89■□□□□ 0.93
UBA1-205ENST00000427561 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
UBA1-205ENST00000427561 SPHKAPQ2M3C7 1700 aa20.89■□□□□ 0.93
UBA1-205ENST00000427561 TRPM2O94759 1503 aa20.88■□□□□ 0.93
UBA1-205ENST00000427561 POTEAQ6S8J7 498 aa20.88■□□□□ 0.93
UBA1-205ENST00000427561 CADPS2Q86UW7 1296 aa20.88■□□□□ 0.93
UBA1-205ENST00000427561 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
UBA1-205ENST00000427561 ATF3P18847 181 aa20.87■□□□□ 0.93
UBA1-205ENST00000427561 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
UBA1-205ENST00000427561 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
UBA1-205ENST00000427561 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
UBA1-205ENST00000427561 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
UBA1-205ENST00000427561 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
UBA1-205ENST00000427561 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
UBA1-205ENST00000427561 AHDC1Q5TGY3 1603 aaPredicted RBP20.8■□□□□ 0.92
UBA1-205ENST00000427561 SPATA31A6Q5VVP1 1343 aa20.79■□□□□ 0.92
UBA1-205ENST00000427561 XRN1Q8IZH2 1706 aaKnown RBP20.78■□□□□ 0.92
UBA1-205ENST00000427561 KIF1BO60333 1816 aa20.78■□□□□ 0.92
UBA1-205ENST00000427561 SHPRHQ149N8 1683 aa20.77■□□□□ 0.92
UBA1-205ENST00000427561 DCCP43146 1447 aa20.76■□□□□ 0.91
UBA1-205ENST00000427561 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
UBA1-205ENST00000427561 MEX3CQ5U5Q3 659 aaKnown RBP20.75■□□□□ 0.91
UBA1-205ENST00000427561 BRINP3Q76B58 766 aa20.75■□□□□ 0.91
UBA1-205ENST00000427561 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
UBA1-205ENST00000427561 LRP6O75581 1613 aa20.74■□□□□ 0.91
UBA1-205ENST00000427561 NEXMIFQ5QGS0 1516 aa20.73■□□□□ 0.91
UBA1-205ENST00000427561 METP08581 1390 aa20.72■□□□□ 0.91
UBA1-205ENST00000427561 SETD1AO15047 1707 aaKnown RBP20.72■□□□□ 0.91
UBA1-205ENST00000427561 NAIPQ13075 1403 aa20.71■□□□□ 0.91
UBA1-205ENST00000427561 ZNF772Q68DY9 489 aaPredicted RBP20.71■□□□□ 0.91
UBA1-205ENST00000427561 MST1RQ04912 1400 aa20.7■□□□□ 0.9
UBA1-205ENST00000427561 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
UBA1-205ENST00000427561 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
UBA1-205ENST00000427561 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
UBA1-205ENST00000427561 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
UBA1-205ENST00000427561 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
UBA1-205ENST00000427561 NUTM2BA6NNL0 878 aaPredicted RBP20.66■□□□□ 0.9
UBA1-205ENST00000427561 NUTM2EB1AL46 878 aaPredicted RBP20.66■□□□□ 0.9
UBA1-205ENST00000427561 VGFO15240 615 aaPredicted RBP20.66■□□□□ 0.9
UBA1-205ENST00000427561 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
UBA1-205ENST00000427561 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
UBA1-205ENST00000427561 LRRC59Q96AG4 307 aaKnown RBP20.65■□□□□ 0.9
UBA1-205ENST00000427561 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
UBA1-205ENST00000427561 RPGRIP1LQ68CZ1 1315 aa20.61■□□□□ 0.89
UBA1-205ENST00000427561 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
UBA1-205ENST00000427561 RXRBP28702 533 aa20.6■□□□□ 0.89
UBA1-205ENST00000427561 PPLO60437 1756 aa20.59■□□□□ 0.89
UBA1-205ENST00000427561 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
UBA1-205ENST00000427561 PTCH1Q13635 1447 aa20.58■□□□□ 0.88
UBA1-205ENST00000427561 AFF2P51816 1311 aa20.57■□□□□ 0.88
UBA1-205ENST00000427561 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
UBA1-205ENST00000427561 ROBO2Q9HCK4 1378 aa20.56■□□□□ 0.88
UBA1-205ENST00000427561 PNPLA6Q8IY17 1366 aa20.55■□□□□ 0.88
UBA1-205ENST00000427561 LAMC1P11047 1609 aa20.54■□□□□ 0.88
UBA1-205ENST00000427561 UPF1Q92900 1129 aaKnown RBP eCLIP20.54■□□□□ 0.88
UBA1-205ENST00000427561 CDK12Q9NYV4 1490 aaPredicted RBP20.54■□□□□ 0.88
UBA1-205ENST00000427561 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
UBA1-205ENST00000427561 C8orf37Q96NL8 207 aa20.52■□□□□ 0.88
UBA1-205ENST00000427561 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
UBA1-205ENST00000427561 QTRT2Q9H974 415 aaKnown RBP20.5■□□□□ 0.87
UBA1-205ENST00000427561 SOS2Q07890 1332 aaPredicted RBP20.5■□□□□ 0.87
UBA1-205ENST00000427561 FOXD1Q16676 465 aa20.49■□□□□ 0.87
UBA1-205ENST00000427561 ADAMTS2O95450 1211 aa20.48■□□□□ 0.87
UBA1-205ENST00000427561 RBM6P78332 1123 aaKnown RBP20.48■□□□□ 0.87
UBA1-205ENST00000427561 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
UBA1-205ENST00000427561 CCDC144AA2RUR9 1427 aa20.47■□□□□ 0.87
UBA1-205ENST00000427561 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
UBA1-205ENST00000427561 ADGRF5Q8IZF2 1346 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms