RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 CANXP27824 592 aaKnown RBP15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 GZF1Q9H116 711 aaPredicted RBP15.97■□□□□ 0.15
LRTOMT-206ENST00000427369 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.15
LRTOMT-206ENST00000427369 CLUAP1Q96AJ1 413 aa15.95■□□□□ 0.14
LRTOMT-206ENST00000427369 GOLGA6L3A6NEY3 463 aa15.95■□□□□ 0.14
LRTOMT-206ENST00000427369 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
LRTOMT-206ENST00000427369 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 PLA2R1Q13018 1463 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 WDR7Q9Y4E6 1490 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 TBC1D2Q9BYX2 928 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 NLRP1Q9C000 1473 aa15.94■□□□□ 0.14
LRTOMT-206ENST00000427369 LAMC1P11047 1609 aa15.93■□□□□ 0.14
LRTOMT-206ENST00000427369 E9PSI1 815 aa15.93■□□□□ 0.14
LRTOMT-206ENST00000427369 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
LRTOMT-206ENST00000427369 CLASP1Q7Z460 1538 aa15.92■□□□□ 0.14
LRTOMT-206ENST00000427369 PDE3AQ14432 1141 aa15.92■□□□□ 0.14
LRTOMT-206ENST00000427369 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 ABCC10Q5T3U5 1492 aa15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 GLIPR1L2Q4G1C9 344 aa15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 PKNOX2Q96KN3 472 aa15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 TBC1D32Q96NH3 1257 aa15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 CENPJQ9HC77 1338 aaPredicted RBP15.91■□□□□ 0.14
LRTOMT-206ENST00000427369 MYO5CQ9NQX4 1742 aa15.9■□□□□ 0.14
LRTOMT-206ENST00000427369 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
LRTOMT-206ENST00000427369 FSD2A1L4K1 749 aa15.89■□□□□ 0.13
LRTOMT-206ENST00000427369 MCM4P33991 863 aa15.89■□□□□ 0.13
LRTOMT-206ENST00000427369 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
LRTOMT-206ENST00000427369 EIF2AK4Q9P2K8 1649 aaKnown RBP15.88■□□□□ 0.13
LRTOMT-206ENST00000427369 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
LRTOMT-206ENST00000427369 CLCN1P35523 988 aa15.88■□□□□ 0.13
LRTOMT-206ENST00000427369 CCDC141Q6ZP82 1450 aa15.87■□□□□ 0.13
LRTOMT-206ENST00000427369 VSIG10Q8N0Z9 540 aa15.87■□□□□ 0.13
LRTOMT-206ENST00000427369 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
LRTOMT-206ENST00000427369 PCDHB15Q9Y5E8 787 aa15.86■□□□□ 0.13
LRTOMT-206ENST00000427369 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
LRTOMT-206ENST00000427369 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
LRTOMT-206ENST00000427369 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 PMFBP1Q8TBY8 1022 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 NUP160Q12769 1436 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 TRAK2O60296 914 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 TNNQ9UQP3 1299 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 ARHGEF5Q12774 1597 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 FBLN2P98095 1184 aa15.85■□□□□ 0.13
LRTOMT-206ENST00000427369 ABCC2Q92887 1545 aa15.84■□□□□ 0.13
LRTOMT-206ENST00000427369 NEUROD2Q15784 382 aa15.84■□□□□ 0.13
LRTOMT-206ENST00000427369 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
LRTOMT-206ENST00000427369 ATP10BO94823 1461 aa15.84■□□□□ 0.13
LRTOMT-206ENST00000427369 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
LRTOMT-206ENST00000427369 RLBP1P12271 317 aa15.83■□□□□ 0.12
LRTOMT-206ENST00000427369 WWC1Q8IX03 1113 aa15.83■□□□□ 0.12
LRTOMT-206ENST00000427369 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
LRTOMT-206ENST00000427369 BCL2L13Q9BXK5 485 aa15.82■□□□□ 0.12
LRTOMT-206ENST00000427369 CARMIL2Q6F5E8 1435 aa15.82■□□□□ 0.12
LRTOMT-206ENST00000427369 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
LRTOMT-206ENST00000427369 ZMYND15Q9H091 742 aa15.81■□□□□ 0.12
LRTOMT-206ENST00000427369 CHMP5Q9NZZ3 219 aa15.81■□□□□ 0.12
LRTOMT-206ENST00000427369 MRE11P49959 708 aa15.81■□□□□ 0.12
LRTOMT-206ENST00000427369 SYNMO15061 1565 aa15.81■□□□□ 0.12
LRTOMT-206ENST00000427369 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
LRTOMT-206ENST00000427369 MRC2Q9UBG0 1479 aa15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 MFAP1P55081 439 aaKnown RBP15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 RNF17Q9BXT8 1623 aaKnown RBP15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 SAMD9LQ8IVG5 1584 aa15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 RARSP54136 660 aaKnown RBP15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 ABCA8O94911 1581 aa15.8■□□□□ 0.12
LRTOMT-206ENST00000427369 MYH16Q9H6N6 1097 aa15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 RWDD1Q9H446 243 aaPredicted RBP15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
LRTOMT-206ENST00000427369 UNC13BO14795 1591 aa15.78■□□□□ 0.12
LRTOMT-206ENST00000427369 RSPH4AQ5TD94 716 aa15.78■□□□□ 0.12
LRTOMT-206ENST00000427369 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
LRTOMT-206ENST00000427369 ESPNB1AK53 854 aa15.77■□□□□ 0.11
LRTOMT-206ENST00000427369 NGEFQ8N5V2 710 aa15.77■□□□□ 0.11
LRTOMT-206ENST00000427369 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
LRTOMT-206ENST00000427369 PLXNC1O60486 1568 aa15.75■□□□□ 0.11
LRTOMT-206ENST00000427369 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
LRTOMT-206ENST00000427369 SCAF11Q99590 1463 aaKnown RBP15.75■□□□□ 0.11
LRTOMT-206ENST00000427369 SYCP2Q9BX26 1530 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 MYOM1P52179 1685 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 CDC42BPBQ9Y5S2 1711 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 AAMPQ13685 434 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
LRTOMT-206ENST00000427369 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
LRTOMT-206ENST00000427369 TRIM44Q96DX7 344 aaPredicted RBP15.73■□□□□ 0.11
LRTOMT-206ENST00000427369 TNNT2P45379 298 aaPredicted RBP15.73■□□□□ 0.11
LRTOMT-206ENST00000427369 MADDQ8WXG6 1647 aa15.73■□□□□ 0.11
LRTOMT-206ENST00000427369 RTEL1-TNFRSF6BF6WH68 1400 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms