RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
HDLBP-214ENST00000427183 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
HDLBP-214ENST00000427183 HDAC5Q9UQL6 1122 aa15.35■□□□□ 0.05
HDLBP-214ENST00000427183 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-214ENST00000427183 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
HDLBP-214ENST00000427183 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
HDLBP-214ENST00000427183 NUTM2FA1L443 756 aa15.34■□□□□ 0.05
HDLBP-214ENST00000427183 SYNE3Q6ZMZ3 975 aa15.34■□□□□ 0.05
HDLBP-214ENST00000427183 TIAM1Q13009 1591 aa15.34■□□□□ 0.05
HDLBP-214ENST00000427183 FAM161AQ3B820 660 aa15.33■□□□□ 0.05
HDLBP-214ENST00000427183 PLCD4Q9BRC7 762 aa15.33■□□□□ 0.05
HDLBP-214ENST00000427183 IFT57Q9NWB7 429 aa15.33■□□□□ 0.05
HDLBP-214ENST00000427183 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.33■□□□□ 0.051e-6■□□□□ 11
HDLBP-214ENST00000427183 NGEFQ8N5V2 710 aa15.33■□□□□ 0.04
HDLBP-214ENST00000427183 AK7Q96M32 723 aa15.33■□□□□ 0.04
HDLBP-214ENST00000427183 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
HDLBP-214ENST00000427183 TRIM29Q14134 588 aa15.32■□□□□ 0.04
HDLBP-214ENST00000427183 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
HDLBP-214ENST00000427183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■□□ 18.8
HDLBP-214ENST00000427183 MNS1Q8NEH6 495 aa15.32■□□□□ 0.04
HDLBP-214ENST00000427183 DHX16O60231 1041 aaKnown RBP15.32■□□□□ 0.04
HDLBP-214ENST00000427183 ANO2Q9NQ90 1003 aa15.32■□□□□ 0.04
HDLBP-214ENST00000427183 ANKRD20A12PQ8NF67 263 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 CASKIN1Q8WXD9 1431 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
HDLBP-214ENST00000427183 FYCO1Q9BQS8 1478 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 AMPHP49418 695 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
HDLBP-214ENST00000427183 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
HDLBP-214ENST00000427183 APPP05067 770 aa15.3■□□□□ 0.04
HDLBP-214ENST00000427183 TTLL5Q6EMB2 1281 aa15.3■□□□□ 0.04
HDLBP-214ENST00000427183 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
HDLBP-214ENST00000427183 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
HDLBP-214ENST00000427183 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
HDLBP-214ENST00000427183 H0YHG0 523 aa15.3■□□□□ 0.04
HDLBP-214ENST00000427183 EXOC6Q8TAG9 804 aa15.29■□□□□ 0.04
HDLBP-214ENST00000427183 VPS37CA5D8V6 355 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-214ENST00000427183 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-214ENST00000427183 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
HDLBP-214ENST00000427183 DHX37Q8IY37 1157 aaKnown RBP15.29■□□□□ 0.04
HDLBP-214ENST00000427183 CCDC47Q96A33 483 aaKnown RBP15.29■□□□□ 0.04
HDLBP-214ENST00000427183 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-214ENST00000427183 CPLX1O14810 134 aa15.28■□□□□ 0.04
HDLBP-214ENST00000427183 CRBNQ96SW2 442 aa15.28■□□□□ 0.04
HDLBP-214ENST00000427183 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-214ENST00000427183 MAP3K1Q13233 1512 aa15.28■□□□□ 0.04
HDLBP-214ENST00000427183 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
HDLBP-214ENST00000427183 HSP90B2PQ58FF3 399 aa15.28■□□□□ 0.04
HDLBP-214ENST00000427183 CENPQQ7L2Z9 268 aaPredicted RBP15.28■□□□□ 0.04
HDLBP-214ENST00000427183 NESP48681 1621 aa15.27■□□□□ 0.04
HDLBP-214ENST00000427183 SASS6Q6UVJ0 657 aa15.27■□□□□ 0.04
HDLBP-214ENST00000427183 ZFYVE27Q5T4F4 411 aa15.27■□□□□ 0.04
HDLBP-214ENST00000427183 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.04
HDLBP-214ENST00000427183 CDR1P51861 262 aa15.27■□□□□ 0.03
HDLBP-214ENST00000427183 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.03
HDLBP-214ENST00000427183 COG6Q9Y2V7 657 aa15.27■□□□□ 0.03
HDLBP-214ENST00000427183 CPLX2Q6PUV4 134 aaKnown RBP15.27■□□□□ 0.03
HDLBP-214ENST00000427183 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
HDLBP-214ENST00000427183 PDILTQ8N807 584 aa15.26■□□□□ 0.03
HDLBP-214ENST00000427183 ODF2Q5BJF6 829 aa15.26■□□□□ 0.03
HDLBP-214ENST00000427183 TRIM34Q9BYJ4 488 aa15.26■□□□□ 0.03
HDLBP-214ENST00000427183 KDM4AO75164 1064 aa15.26■□□□□ 0.03
HDLBP-214ENST00000427183 CCDC191Q8NCU4 936 aa15.25■□□□□ 0.03
HDLBP-214ENST00000427183 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
HDLBP-214ENST00000427183 NFXL1Q6ZNB6 911 aa15.24■□□□□ 0.03
HDLBP-214ENST00000427183 ACBD3Q9H3P7 528 aa15.24■□□□□ 0.03
HDLBP-214ENST00000427183 HSP90AB2PQ58FF8 381 aa15.24■□□□□ 0.03
HDLBP-214ENST00000427183 CAGE1Q8TC20 777 aa15.24■□□□□ 0.03
HDLBP-214ENST00000427183 MSH5O43196 834 aa15.23■□□□□ 0.03
HDLBP-214ENST00000427183 EIF2S2P20042 333 aaKnown RBP15.23■□□□□ 0.03
HDLBP-214ENST00000427183 HSP90AB3PQ58FF7 597 aa15.23■□□□□ 0.03
HDLBP-214ENST00000427183 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
HDLBP-214ENST00000427183 ZKSCAN1P17029 563 aaPredicted RBP15.23■□□□□ 0.03
HDLBP-214ENST00000427183 FGD6Q6ZV73 1430 aa15.23■□□□□ 0.03
HDLBP-214ENST00000427183 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
HDLBP-214ENST00000427183 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
HDLBP-214ENST00000427183 CUL7Q14999 1698 aa15.23■□□□□ 0.03
HDLBP-214ENST00000427183 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
HDLBP-214ENST00000427183 RNF214Q8ND24 703 aa15.22■□□□□ 0.03
HDLBP-214ENST00000427183 NOL10Q9BSC4 688 aaKnown RBP15.22■□□□□ 0.03
HDLBP-214ENST00000427183 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.03
HDLBP-214ENST00000427183 CHMP4CQ96CF2 233 aa15.21■□□□□ 0.03
HDLBP-214ENST00000427183 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
HDLBP-214ENST00000427183 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
HDLBP-214ENST00000427183 SMC3Q9UQE7 1217 aa15.21■□□□□ 0.02
HDLBP-214ENST00000427183 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 RBM10P98175 930 aaKnown RBP15.2■□□□□ 0.02
HDLBP-214ENST00000427183 PDE3BQ13370 1112 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 ZKSCAN2Q63HK3 967 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 PCF11O94913 1555 aaKnown RBP15.2■□□□□ 0.02
HDLBP-214ENST00000427183 TSPYL1Q9H0U9 437 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 CHMP5Q9NZZ3 219 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 CCDC18Q5T9S5 1454 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 C9orf78Q9NZ63 289 aaPredicted RBP15.2■□□□□ 0.02
HDLBP-214ENST00000427183 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
HDLBP-214ENST00000427183 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
HDLBP-214ENST00000427183 OFD1O75665 1012 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms